RNA–Protein interactions for RNA: ENST00000499006.6

LINC01550-201, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 1 (best)

Gene LINC01550, Length 1,458 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-201ENST00000499006 GNASQ5JWF2 1037 aa21.87■■□□□ 1.09
LINC01550-201ENST00000499006 CDK5RAP3Q96JB5 506 aa21.87■■□□□ 1.09
LINC01550-201ENST00000499006 PYM1Q9BRP8 204 aaKnown RBP21.87■■□□□ 1.09
LINC01550-201ENST00000499006 MCOLN1Q9GZU1 580 aa21.87■■□□□ 1.09
LINC01550-201ENST00000499006 BLOC1S4Q9NUP1 217 aa21.87■■□□□ 1.09
LINC01550-201ENST00000499006 ZNF202O95125 648 aa21.86■■□□□ 1.09
LINC01550-201ENST00000499006 MYCP01106 439 aaPredicted RBP21.86■■□□□ 1.09
LINC01550-201ENST00000499006 ZNF286BP0CG31 522 aa21.86■■□□□ 1.09
LINC01550-201ENST00000499006 PTMSP20962 102 aa21.86■■□□□ 1.09
LINC01550-201ENST00000499006 SLC26A2P50443 739 aa21.86■■□□□ 1.09
LINC01550-201ENST00000499006 PSMC6P62333 389 aa21.86■■□□□ 1.09
LINC01550-201ENST00000499006 RRAGBQ5VZM2 374 aa21.86■■□□□ 1.09
LINC01550-201ENST00000499006 PDXDC2PQ6P474 469 aa21.86■■□□□ 1.09
LINC01550-201ENST00000499006 IQUBQ8NA54 791 aa21.86■■□□□ 1.09
LINC01550-201ENST00000499006 RASSF8Q8NHQ8 419 aa21.86■■□□□ 1.09
LINC01550-201ENST00000499006 GLG1Q92896 1179 aa21.86■■□□□ 1.09
LINC01550-201ENST00000499006 STK17AQ9UEE5 414 aa21.86■■□□□ 1.09
LINC01550-201ENST00000499006 TRIP12Q14669 1992 aaPredicted RBP21.86■■□□□ 1.09
LINC01550-201ENST00000499006 MYH11P35749 1972 aa21.85■■□□□ 1.09
LINC01550-201ENST00000499006 ZBTB39O15060 712 aa21.85■■□□□ 1.09
LINC01550-201ENST00000499006 KPNA6O60684 536 aa21.85■■□□□ 1.09
LINC01550-201ENST00000499006 F2P00734 622 aa21.85■■□□□ 1.09
LINC01550-201ENST00000499006 PURAQ00577 322 aaKnown RBP21.85■■□□□ 1.09
LINC01550-201ENST00000499006 PRKCEQ02156 737 aa21.85■■□□□ 1.09
LINC01550-201ENST00000499006 LRRC41Q15345 812 aa21.85■■□□□ 1.09
LINC01550-201ENST00000499006 KAT2BQ92831 832 aa21.85■■□□□ 1.09
LINC01550-201ENST00000499006 DHX58Q96C10 678 aa21.85■■□□□ 1.09
LINC01550-201ENST00000499006 DEFB118Q96PH6 123 aa21.85■■□□□ 1.09
LINC01550-201ENST00000499006 NACC1Q96RE7 527 aa21.85■■□□□ 1.09
LINC01550-201ENST00000499006 ERAP1Q9NZ08 941 aa21.85■■□□□ 1.09
LINC01550-201ENST00000499006 EVPLQ92817 2033 aa21.85■■□□□ 1.09
LINC01550-201ENST00000499006 A0A087WWV3 80 aa21.84■■□□□ 1.09
LINC01550-201ENST00000499006 H3BRB1 525 aa21.84■■□□□ 1.09
LINC01550-201ENST00000499006 ACTN4O43707 911 aaKnown RBP21.84■■□□□ 1.09
LINC01550-201ENST00000499006 ZEB2O60315 1214 aa21.84■■□□□ 1.09
LINC01550-201ENST00000499006 XRCC6P12956 609 aaKnown RBP eCLIP21.84■■□□□ 1.09
LINC01550-201ENST00000499006 STAT6P42226 847 aa21.84■■□□□ 1.09
LINC01550-201ENST00000499006 LONRF3Q496Y0 759 aa21.84■■□□□ 1.09
LINC01550-201ENST00000499006 RNF180Q86T96 592 aa21.84■■□□□ 1.09
LINC01550-201ENST00000499006 TUT1Q9H6E5 874 aaKnown RBP21.84■■□□□ 1.09
LINC01550-201ENST00000499006 USP25Q9UHP3 1055 aa21.84■■□□□ 1.09
LINC01550-201ENST00000499006 OGDHLQ9ULD0 1010 aa21.84■■□□□ 1.09
LINC01550-201ENST00000499006 DNM3Q9UQ16 869 aa21.84■■□□□ 1.09
LINC01550-201ENST00000499006 E9PMD0 336 aa21.83■■□□□ 1.09
LINC01550-201ENST00000499006 MBD3O95983 291 aa21.83■■□□□ 1.09
LINC01550-201ENST00000499006 OATP04181 439 aa21.83■■□□□ 1.09
LINC01550-201ENST00000499006 MYL3P08590 195 aa21.83■■□□□ 1.09
LINC01550-201ENST00000499006 YWHABP31946 246 aaKnown RBP21.83■■□□□ 1.09
LINC01550-201ENST00000499006 PLCB4Q15147 1175 aa21.83■■□□□ 1.09
LINC01550-201ENST00000499006 KCNA10Q16322 511 aa21.83■■□□□ 1.09
LINC01550-201ENST00000499006 XKR3Q5GH77 459 aa21.83■■□□□ 1.09
LINC01550-201ENST00000499006 ANO5Q75V66 913 aa21.83■■□□□ 1.09
LINC01550-201ENST00000499006 PCSK9Q8NBP7 692 aaKnown RBP21.83■■□□□ 1.09
LINC01550-201ENST00000499006 PIGOQ8TEQ8 1089 aa21.83■■□□□ 1.09
LINC01550-201ENST00000499006 RAD54LQ92698 747 aa21.83■■□□□ 1.09
LINC01550-201ENST00000499006 CRISPLD2Q9H0B8 497 aa21.83■■□□□ 1.09
LINC01550-201ENST00000499006 CUEDC2Q9H467 287 aa21.83■■□□□ 1.09
LINC01550-201ENST00000499006 DACT1Q9NYF0 836 aa21.83■■□□□ 1.09
LINC01550-201ENST00000499006 ZNF215Q9UL58 517 aaPredicted RBP21.83■■□□□ 1.09
LINC01550-201ENST00000499006 HAS3O00219 553 aa21.83■■□□□ 1.08
LINC01550-201ENST00000499006 EYA4O95677 639 aa21.83■■□□□ 1.08
LINC01550-201ENST00000499006 SLFN14P0C7P3 912 aa21.83■■□□□ 1.08
LINC01550-201ENST00000499006 ARRDC4Q8NCT1 418 aa21.83■■□□□ 1.08
LINC01550-201ENST00000499006 ATP8B4Q8TF62 1192 aa21.83■■□□□ 1.08
LINC01550-201ENST00000499006 BBXQ8WY36 941 aaPredicted RBP21.83■■□□□ 1.08
LINC01550-201ENST00000499006 TIGD1Q96MW7 591 aa21.83■■□□□ 1.08
LINC01550-201ENST00000499006 TSEN34Q9BSV6 310 aaKnown RBP21.83■■□□□ 1.08
LINC01550-201ENST00000499006 NIFKQ9BYG3 293 aaKnown RBP21.83■■□□□ 1.08
LINC01550-201ENST00000499006 RNPEPQ9H4A4 650 aa21.83■■□□□ 1.08
LINC01550-201ENST00000499006 ANKEF1Q9NU02 776 aa21.83■■□□□ 1.08
LINC01550-201ENST00000499006 SERTAD1Q9UHV2 236 aa21.83■■□□□ 1.08
LINC01550-201ENST00000499006 DBR1Q9UK59 544 aaKnown RBP21.83■■□□□ 1.08
LINC01550-201ENST00000499006 TMEM150BA6NC51 233 aa21.82■■□□□ 1.08
LINC01550-201ENST00000499006 ASGR1P07306 291 aa21.82■■□□□ 1.08
LINC01550-201ENST00000499006 GJB1P08034 283 aa21.82■■□□□ 1.08
LINC01550-201ENST00000499006 MARK3P27448 753 aa21.82■■□□□ 1.08
LINC01550-201ENST00000499006 KRBA2Q6ZNG9 492 aa21.82■■□□□ 1.08
LINC01550-201ENST00000499006 CKAP2LQ8IYA6 745 aa21.82■■□□□ 1.08
LINC01550-201ENST00000499006 LARP4BQ92615 738 aaKnown RBP21.82■■□□□ 1.08
LINC01550-201ENST00000499006 FAM167AQ96KS9 214 aa21.82■■□□□ 1.08
LINC01550-201ENST00000499006 KBTBD4Q9NVX7 518 aa21.82■■□□□ 1.08
LINC01550-201ENST00000499006 SGPL1O95470 568 aa21.81■■□□□ 1.08
LINC01550-201ENST00000499006 RARRES1P49788 294 aa21.81■■□□□ 1.08
LINC01550-201ENST00000499006 SLC12A3P55017 1021 aa21.81■■□□□ 1.08
LINC01550-201ENST00000499006 OTUD6AQ7L8S5 288 aa21.81■■□□□ 1.08
LINC01550-201ENST00000499006 SYT2Q8N9I0 419 aaPredicted RBP21.81■■□□□ 1.08
LINC01550-201ENST00000499006 MTRQ99707 1265 aa21.81■■□□□ 1.08
LINC01550-201ENST00000499006 MTG1Q9BT17 334 aaPredicted RBP21.81■■□□□ 1.08
LINC01550-201ENST00000499006 MAGEF1Q9HAY2 307 aa21.81■■□□□ 1.08
LINC01550-201ENST00000499006 NRBP2Q9NSY0 501 aa21.81■■□□□ 1.08
LINC01550-201ENST00000499006 KIAA0100Q14667 2235 aaKnown RBP21.8■■□□□ 1.08
LINC01550-201ENST00000499006 MOXD2PA6NHM9 499 aa21.8■■□□□ 1.08
LINC01550-201ENST00000499006 PLA2G4BP0C869 781 aa21.8■■□□□ 1.08
LINC01550-201ENST00000499006 MCM6Q14566 821 aa21.8■■□□□ 1.08
LINC01550-201ENST00000499006 MFSD10Q14728 455 aa21.8■■□□□ 1.08
LINC01550-201ENST00000499006 TARBP2Q15633 366 aaKnown RBP21.8■■□□□ 1.08
LINC01550-201ENST00000499006 PLA2G4FQ68DD2 849 aa21.8■■□□□ 1.08
LINC01550-201ENST00000499006 CXCL17Q6UXB2 119 aa21.8■■□□□ 1.08
LINC01550-201ENST00000499006 TRMT1LQ7Z2T5 733 aaKnown RBP21.8■■□□□ 1.08
LINC01550-201ENST00000499006 CEP57L1Q8IYX8 460 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms