RNA–Protein interactions for RNA: ENST00000498803.5

SPIRE1-211, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 4

Gene SPIRE1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-211ENST00000498803 LIMA1Q9UHB6 759 aaKnown RBP9.36□□□□□ -0.91
SPIRE1-211ENST00000498803 MAPK8IP1Q9UQF2 711 aa9.36□□□□□ -0.91
SPIRE1-211ENST00000498803 PCDHB13Q9Y5F0 798 aa9.36□□□□□ -0.91
SPIRE1-211ENST00000498803 TLL2Q9Y6L7 1015 aa9.36□□□□□ -0.91
SPIRE1-211ENST00000498803 A0A1B0GTH6 734 aa9.35□□□□□ -0.91
SPIRE1-211ENST00000498803 SLC15A5A6NIM6 579 aa9.35□□□□□ -0.91
SPIRE1-211ENST00000498803 BACH1O14867 736 aa9.35□□□□□ -0.91
SPIRE1-211ENST00000498803 ATG7O95352 703 aa9.35□□□□□ -0.91
SPIRE1-211ENST00000498803 CCNE2O96020 404 aa9.35□□□□□ -0.91
SPIRE1-211ENST00000498803 SUPT20HL2P0C7V6 817 aa9.35□□□□□ -0.91
SPIRE1-211ENST00000498803 ATP1A3P13637 1013 aa9.35□□□□□ -0.91
SPIRE1-211ENST00000498803 MSNP26038 577 aaKnown RBP9.35□□□□□ -0.91
SPIRE1-211ENST00000498803 ADORA2AP29274 412 aa9.35□□□□□ -0.91
SPIRE1-211ENST00000498803 RARRES1P49788 294 aa9.35□□□□□ -0.91
SPIRE1-211ENST00000498803 SLC26A2P50443 739 aa9.35□□□□□ -0.91
SPIRE1-211ENST00000498803 FKBP3Q00688 224 aaKnown RBP9.35□□□□□ -0.91
SPIRE1-211ENST00000498803 MKRN3Q13064 507 aaKnown RBP9.35□□□□□ -0.91
SPIRE1-211ENST00000498803 TTLL4Q14679 1199 aa9.35□□□□□ -0.91
SPIRE1-211ENST00000498803 BMT2Q1RMZ1 405 aa9.35□□□□□ -0.91
SPIRE1-211ENST00000498803 EDRF1Q3B7T1 1238 aa9.35□□□□□ -0.91
SPIRE1-211ENST00000498803 ZNF792Q3KQV3 632 aa9.35□□□□□ -0.91
SPIRE1-211ENST00000498803 TCP11X2Q5H9J9 407 aa9.35□□□□□ -0.91
SPIRE1-211ENST00000498803 PADI6Q6TGC4 694 aa9.35□□□□□ -0.91
SPIRE1-211ENST00000498803 METTL7BQ6UX53 244 aa9.35□□□□□ -0.91
SPIRE1-211ENST00000498803 ABHD15Q6UXT9 468 aa9.35□□□□□ -0.91
SPIRE1-211ENST00000498803 PLEKHH3Q7Z736 793 aa9.35□□□□□ -0.91
SPIRE1-211ENST00000498803 REM2Q8IYK8 340 aaPredicted RBP9.35□□□□□ -0.91
SPIRE1-211ENST00000498803 CCDC150Q8NCX0 1101 aa9.35□□□□□ -0.91
SPIRE1-211ENST00000498803 SCFD2Q8WU76 684 aa9.35□□□□□ -0.91
SPIRE1-211ENST00000498803 SEPT1Q8WYJ6 367 aa9.35□□□□□ -0.91
SPIRE1-211ENST00000498803 CEP63Q96MT8 703 aa9.35□□□□□ -0.91
SPIRE1-211ENST00000498803 MED15Q96RN5 788 aa9.35□□□□□ -0.91
SPIRE1-211ENST00000498803 PORCNQ9H237 461 aa9.35□□□□□ -0.91
SPIRE1-211ENST00000498803 MRPL44Q9H9J2 332 aaKnown RBP9.35□□□□□ -0.91
SPIRE1-211ENST00000498803 EFCC1Q9HA90 598 aa9.35□□□□□ -0.91
SPIRE1-211ENST00000498803 MLXIPQ9HAP2 919 aa9.35□□□□□ -0.91
SPIRE1-211ENST00000498803 C17orf75Q9HAS0 396 aa9.35□□□□□ -0.91
SPIRE1-211ENST00000498803 ZFYVE28Q9HCC9 887 aa9.35□□□□□ -0.91
SPIRE1-211ENST00000498803 PCDHA2Q9Y5H9 948 aa9.35□□□□□ -0.91
SPIRE1-211ENST00000498803 SRCAPQ6ZRS2 3230 aa9.35□□□□□ -0.91
SPIRE1-211ENST00000498803 ASTN1O14525 1302 aa9.34□□□□□ -0.91
SPIRE1-211ENST00000498803 TMEM88BA6NKF7 163 aa9.34□□□□□ -0.91
SPIRE1-211ENST00000498803 KCNJ18B7U540 433 aa9.34□□□□□ -0.91
SPIRE1-211ENST00000498803 H0YCG3 227 aa9.34□□□□□ -0.91
SPIRE1-211ENST00000498803 PDXKO00764 312 aa9.34□□□□□ -0.91
SPIRE1-211ENST00000498803 CALUO43852 315 aaPredicted RBP9.34□□□□□ -0.91
SPIRE1-211ENST00000498803 DGAT1O75907 488 aa9.34□□□□□ -0.91
SPIRE1-211ENST00000498803 ALDH1A1P00352 501 aa9.34□□□□□ -0.91
SPIRE1-211ENST00000498803 PGK2P07205 417 aa9.34□□□□□ -0.91
SPIRE1-211ENST00000498803 TPM1P09493 284 aa9.34□□□□□ -0.91
SPIRE1-211ENST00000498803 UBA1P22314 1058 aaKnown RBP9.34□□□□□ -0.91
SPIRE1-211ENST00000498803 RPL13P26373 211 aaKnown RBP9.34□□□□□ -0.91
SPIRE1-211ENST00000498803 SMTNP53814 917 aa9.34□□□□□ -0.91
SPIRE1-211ENST00000498803 GRB14Q14449 540 aa9.34□□□□□ -0.91
SPIRE1-211ENST00000498803 KCNJ12Q14500 433 aa9.34□□□□□ -0.91
SPIRE1-211ENST00000498803 NR1I3Q14994 352 aa9.34□□□□□ -0.91
SPIRE1-211ENST00000498803 TAF1CQ15572 869 aaPredicted RBP9.34□□□□□ -0.91
SPIRE1-211ENST00000498803 KNOP1Q1ED39 458 aaKnown RBP9.34□□□□□ -0.91
SPIRE1-211ENST00000498803 XKR9Q5GH70 373 aa9.34□□□□□ -0.91
SPIRE1-211ENST00000498803 ANKRD40Q6AI12 368 aa9.34□□□□□ -0.91
SPIRE1-211ENST00000498803 SWSAP1Q6NVH7 229 aa9.34□□□□□ -0.91
SPIRE1-211ENST00000498803 MAMDC4Q6UXC1 1216 aa9.34□□□□□ -0.91
SPIRE1-211ENST00000498803 CYFIP1Q7L576 1253 aa9.34□□□□□ -0.91
SPIRE1-211ENST00000498803 GPR142Q7Z601 462 aa9.34□□□□□ -0.91
SPIRE1-211ENST00000498803 DPP9Q86TI2 863 aa9.34□□□□□ -0.91
SPIRE1-211ENST00000498803 VSTM4Q8IW00 320 aa9.34□□□□□ -0.91
SPIRE1-211ENST00000498803 FAM178BQ8IXR5 827 aa9.34□□□□□ -0.91
SPIRE1-211ENST00000498803 MYCT1Q8N699 235 aa9.34□□□□□ -0.91
SPIRE1-211ENST00000498803 SPC24Q8NBT2 197 aa9.34□□□□□ -0.91
SPIRE1-211ENST00000498803 MCPH1Q8NEM0 835 aa9.34□□□□□ -0.91
SPIRE1-211ENST00000498803 KIFAP3Q92845 792 aa9.34□□□□□ -0.91
SPIRE1-211ENST00000498803 IQCDQ96DY2 449 aa9.34□□□□□ -0.91
SPIRE1-211ENST00000498803 FAM167AQ96KS9 214 aa9.34□□□□□ -0.91
SPIRE1-211ENST00000498803 PTPN18Q99952 460 aa9.34□□□□□ -0.91
SPIRE1-211ENST00000498803 RUSC1Q9BVN2 902 aa9.34□□□□□ -0.91
SPIRE1-211ENST00000498803 SRRTQ9BXP5 876 aaKnown RBP9.34□□□□□ -0.91
SPIRE1-211ENST00000498803 AZI2Q9H6S1 392 aa9.34□□□□□ -0.91
SPIRE1-211ENST00000498803 ZNF302Q9NR11 478 aa9.34□□□□□ -0.91
SPIRE1-211ENST00000498803 NRBP2Q9NSY0 501 aa9.34□□□□□ -0.91
SPIRE1-211ENST00000498803 CGNQ9P2M7 1197 aaKnown RBP9.34□□□□□ -0.91
SPIRE1-211ENST00000498803 GABBR1Q9UBS5 961 aa9.34□□□□□ -0.91
SPIRE1-211ENST00000498803 DDX41Q9UJV9 622 aaKnown RBP9.34□□□□□ -0.91
SPIRE1-211ENST00000498803 ZKSCAN5Q9Y2L8 839 aa9.34□□□□□ -0.91
SPIRE1-211ENST00000498803 SYNGAP1Q96PV0 1343 aa9.33□□□□□ -0.92
SPIRE1-211ENST00000498803 IGSF9BQ9UPX0 1349 aa9.33□□□□□ -0.92
SPIRE1-211ENST00000498803 IGKV6D-21A0A0A0MT36 114 aa9.33□□□□□ -0.92
SPIRE1-211ENST00000498803 NPHP3-ACAD11A0A0J9YXS1 232 aa9.33□□□□□ -0.92
SPIRE1-211ENST00000498803 ESPNB1AK53 854 aa9.33□□□□□ -0.92
SPIRE1-211ENST00000498803 NOP56O00567 594 aaKnown RBP9.33□□□□□ -0.92
SPIRE1-211ENST00000498803 N4BP3O15049 544 aa9.33□□□□□ -0.92
SPIRE1-211ENST00000498803 CETN3O15182 167 aa9.33□□□□□ -0.92
SPIRE1-211ENST00000498803 PEX10O60683 326 aa9.33□□□□□ -0.92
SPIRE1-211ENST00000498803 TOMM70O94826 608 aa9.33□□□□□ -0.92
SPIRE1-211ENST00000498803 FARP2O94887 1054 aaPredicted RBP9.33□□□□□ -0.92
SPIRE1-211ENST00000498803 GCNT3O95395 438 aa9.33□□□□□ -0.92
SPIRE1-211ENST00000498803 GGPS1O95749 300 aa9.33□□□□□ -0.92
SPIRE1-211ENST00000498803 PLS3P13797 630 aa9.33□□□□□ -0.92
SPIRE1-211ENST00000498803 COPB1P53618 953 aaKnown RBP9.33□□□□□ -0.92
SPIRE1-211ENST00000498803 RTP1P59025 263 aa9.33□□□□□ -0.92
SPIRE1-211ENST00000498803 SNRPFP62306 86 aaKnown RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms