RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 MFAP3LO75121 409 aa6.31□□□□□ -1.4
SOX2-OT-218ENST00000498731 FAM200BP0CF97 657 aa6.31□□□□□ -1.4
SOX2-OT-218ENST00000498731 SP100P23497 879 aaPredicted RBP6.31□□□□□ -1.4
SOX2-OT-218ENST00000498731 GTF2IP78347 998 aa6.31□□□□□ -1.4
SOX2-OT-218ENST00000498731 TAF11Q15544 211 aa6.31□□□□□ -1.4
SOX2-OT-218ENST00000498731 SMUG1Q53HV7 270 aa6.31□□□□□ -1.4
SOX2-OT-218ENST00000498731 TCERG1LQ5VWI1 586 aa6.31□□□□□ -1.4
SOX2-OT-218ENST00000498731 KLHL10Q6JEL2 608 aa6.31□□□□□ -1.4
SOX2-OT-218ENST00000498731 PRR5LQ6MZQ0 368 aa6.31□□□□□ -1.4
SOX2-OT-218ENST00000498731 ADGRA1Q86SQ6 560 aa6.31□□□□□ -1.4
SOX2-OT-218ENST00000498731 NKX2-3Q8TAU0 364 aa6.31□□□□□ -1.4
SOX2-OT-218ENST00000498731 NAF1Q96HR8 494 aaKnown RBP6.31□□□□□ -1.4
SOX2-OT-218ENST00000498731 NDNQ99608 321 aa6.31□□□□□ -1.4
SOX2-OT-218ENST00000498731 ALDH8A1Q9H2A2 487 aaPredicted RBP6.31□□□□□ -1.4
SOX2-OT-218ENST00000498731 RANBP17Q9H2T7 1088 aaKnown RBP6.31□□□□□ -1.4
SOX2-OT-218ENST00000498731 ETNK2Q9NVF9 386 aa6.31□□□□□ -1.4
SOX2-OT-218ENST00000498731 DLGAP2Q9P1A6 1054 aa6.31□□□□□ -1.4
SOX2-OT-218ENST00000498731 HSFX1Q9UBD0 423 aa6.31□□□□□ -1.4
SOX2-OT-218ENST00000498731 SUN2Q9UH99 717 aa6.31□□□□□ -1.4
SOX2-OT-218ENST00000498731 SLC12A6Q9UHW9 1150 aa6.31□□□□□ -1.4
SOX2-OT-218ENST00000498731 STX8Q9UNK0 236 aa6.31□□□□□ -1.4
SOX2-OT-218ENST00000498731 SIPA1L3O60292 1781 aaPredicted RBP6.3□□□□□ -1.4
SOX2-OT-218ENST00000498731 GSG1L2A8MUP6 293 aa6.3□□□□□ -1.4
SOX2-OT-218ENST00000498731 H7C1D1 291 aa6.3□□□□□ -1.4
SOX2-OT-218ENST00000498731 RPL13P26373 211 aaKnown RBP6.3□□□□□ -1.4
SOX2-OT-218ENST00000498731 GNALP38405 381 aa6.3□□□□□ -1.4
SOX2-OT-218ENST00000498731 USP11P51784 963 aa6.3□□□□□ -1.4
SOX2-OT-218ENST00000498731 GPSM2P81274 684 aa6.3□□□□□ -1.4
SOX2-OT-218ENST00000498731 CYP27A1Q02318 531 aa6.3□□□□□ -1.4
SOX2-OT-218ENST00000498731 MECOMQ03112 1051 aa6.3□□□□□ -1.4
SOX2-OT-218ENST00000498731 EVX2Q03828 476 aa6.3□□□□□ -1.4
SOX2-OT-218ENST00000498731 MAP2K5Q13163 448 aa6.3□□□□□ -1.4
SOX2-OT-218ENST00000498731 SF3B3Q15393 1217 aaKnown RBP6.3□□□□□ -1.4
SOX2-OT-218ENST00000498731 Q4G0T1 1027 aa6.3□□□□□ -1.4
SOX2-OT-218ENST00000498731 HAUS3Q68CZ6 603 aa6.3□□□□□ -1.4
SOX2-OT-218ENST00000498731 LMBRD2Q68DH5 695 aaPredicted RBP6.3□□□□□ -1.4
SOX2-OT-218ENST00000498731 OR52E8Q6IFG1 317 aa6.3□□□□□ -1.4
SOX2-OT-218ENST00000498731 TMEM154Q6P9G4 183 aa6.3□□□□□ -1.4
SOX2-OT-218ENST00000498731 SLC15A3Q8IY34 581 aa6.3□□□□□ -1.4
SOX2-OT-218ENST00000498731 MLKLQ8NB16 471 aa6.3□□□□□ -1.4
SOX2-OT-218ENST00000498731 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.3□□□□□ -1.4
SOX2-OT-218ENST00000498731 TGFBRAP1Q8WUH2 860 aa6.3□□□□□ -1.4
SOX2-OT-218ENST00000498731 IFT81Q8WYA0 676 aa6.3□□□□□ -1.4
SOX2-OT-218ENST00000498731 IFT43Q96FT9 208 aa6.3□□□□□ -1.4
SOX2-OT-218ENST00000498731 CRNKL1Q9BZJ0 848 aaKnown RBP6.3□□□□□ -1.4
SOX2-OT-218ENST00000498731 VAT1LQ9HCJ6 419 aa6.3□□□□□ -1.4
SOX2-OT-218ENST00000498731 EPB41L4AQ9HCS5 686 aaPredicted RBP6.3□□□□□ -1.4
SOX2-OT-218ENST00000498731 GGA1Q9UJY5 639 aa6.3□□□□□ -1.4
SOX2-OT-218ENST00000498731 KCNJ14Q9UNX9 436 aa6.3□□□□□ -1.4
SOX2-OT-218ENST00000498731 USP20Q9Y2K6 914 aa6.3□□□□□ -1.4
SOX2-OT-218ENST00000498731 MAGEA13PA6NCF6 341 aa6.3□□□□□ -1.4
SOX2-OT-218ENST00000498731 GMNCA6NCL1 334 aa6.3□□□□□ -1.4
SOX2-OT-218ENST00000498731 TRAPPC3O43617 180 aa6.3□□□□□ -1.4
SOX2-OT-218ENST00000498731 SUPT3HO75486 399 aa6.3□□□□□ -1.4
SOX2-OT-218ENST00000498731 DNAJC8O75937 253 aaPredicted RBP6.3□□□□□ -1.4
SOX2-OT-218ENST00000498731 USP17L8P0C7I0 530 aa6.3□□□□□ -1.4
SOX2-OT-218ENST00000498731 EPB41P11171 864 aaKnown RBP6.3□□□□□ -1.4
SOX2-OT-218ENST00000498731 FLT3P36888 993 aa6.3□□□□□ -1.4
SOX2-OT-218ENST00000498731 SCNN1DP51172 638 aa6.3□□□□□ -1.4
SOX2-OT-218ENST00000498731 DNA2P51530 1060 aa6.3□□□□□ -1.4
SOX2-OT-218ENST00000498731 RNASE9P60153 205 aaKnown RBP6.3□□□□□ -1.4
SOX2-OT-218ENST00000498731 DEUP1Q05D60 604 aa6.3□□□□□ -1.4
SOX2-OT-218ENST00000498731 NFRKBQ6P4R8 1299 aa6.3□□□□□ -1.4
SOX2-OT-218ENST00000498731 USP49Q70CQ1 688 aa6.3□□□□□ -1.4
SOX2-OT-218ENST00000498731 CREG2Q8IUH2 290 aa6.3□□□□□ -1.4
SOX2-OT-218ENST00000498731 ZSCAN29Q8IWY8 852 aaPredicted RBP6.3□□□□□ -1.4
SOX2-OT-218ENST00000498731 TRIM22Q8IYM9 498 aa6.3□□□□□ -1.4
SOX2-OT-218ENST00000498731 CCDC170Q8IYT3 715 aa6.3□□□□□ -1.4
SOX2-OT-218ENST00000498731 SUPT20HQ8NEM7 779 aa6.3□□□□□ -1.4
SOX2-OT-218ENST00000498731 EEF2KMTQ96G04 330 aa6.3□□□□□ -1.4
SOX2-OT-218ENST00000498731 ZC3H12CQ9C0D7 883 aaKnown RBP6.3□□□□□ -1.4
SOX2-OT-218ENST00000498731 HYOU1Q9Y4L1 999 aa6.3□□□□□ -1.4
SOX2-OT-218ENST00000498731 SAR1BQ9Y6B6 198 aa6.3□□□□□ -1.4
SOX2-OT-218ENST00000498731 A0A1W2PQ67 120 aa6.29□□□□□ -1.4
SOX2-OT-218ENST00000498731 MACROD2A1Z1Q3 448 aa6.29□□□□□ -1.4
SOX2-OT-218ENST00000498731 SPTLC2O15270 562 aa6.29□□□□□ -1.4
SOX2-OT-218ENST00000498731 ANTXR2P58335 489 aa6.29□□□□□ -1.4
SOX2-OT-218ENST00000498731 SSRP1Q08945 709 aaKnown RBP6.29□□□□□ -1.4
SOX2-OT-218ENST00000498731 KCTD2Q14681 263 aa6.29□□□□□ -1.4
SOX2-OT-218ENST00000498731 SAFBQ15424 915 aaKnown RBP eCLIP6.29□□□□□ -1.4
SOX2-OT-218ENST00000498731 RTN1Q16799 776 aa6.29□□□□□ -1.4
SOX2-OT-218ENST00000498731 LACTB2Q53H82 288 aaPredicted RBP6.29□□□□□ -1.4
SOX2-OT-218ENST00000498731 IFIT1BQ5T764 474 aaKnown RBP6.29□□□□□ -1.4
SOX2-OT-218ENST00000498731 CYP4X1Q8N118 509 aa6.29□□□□□ -1.4
SOX2-OT-218ENST00000498731 CCDC63Q8NA47 563 aa6.29□□□□□ -1.4
SOX2-OT-218ENST00000498731 DYNLL2Q96FJ2 89 aa6.29□□□□□ -1.4
SOX2-OT-218ENST00000498731 PHF12Q96QT6 1004 aa6.29□□□□□ -1.4
SOX2-OT-218ENST00000498731 CORO1BQ9BR76 489 aa6.29□□□□□ -1.4
SOX2-OT-218ENST00000498731 PPCSQ9HAB8 311 aa6.29□□□□□ -1.4
SOX2-OT-218ENST00000498731 NOP53Q9NZM5 478 aaKnown RBP6.29□□□□□ -1.4
SOX2-OT-218ENST00000498731 MAN1B1Q9UKM7 699 aa6.29□□□□□ -1.4
SOX2-OT-218ENST00000498731 SSUH2Q9Y2M2 353 aa6.29□□□□□ -1.4
SOX2-OT-218ENST00000498731 CNTNAP4Q9C0A0 1308 aa6.29□□□□□ -1.4
SOX2-OT-218ENST00000498731 LAMA4Q16363 1823 aa6.29□□□□□ -1.4
SOX2-OT-218ENST00000498731 IGF2BP3O00425 579 aaKnown RBP eCLIP6.29□□□□□ -1.4
SOX2-OT-218ENST00000498731 NMT2O60551 498 aa6.29□□□□□ -1.4
SOX2-OT-218ENST00000498731 PDGFRBP09619 1106 aa6.29□□□□□ -1.4
SOX2-OT-218ENST00000498731 GYS1P13807 737 aa6.29□□□□□ -1.4
SOX2-OT-218ENST00000498731 DRD4P21917 467 aa6.29□□□□□ -1.4
SOX2-OT-218ENST00000498731 ALDH3A1P30838 453 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms