RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 IFNL3Q8IZI9 196 aa4.39□□□□□ -1.71
CLTC-209ENST00000498711 MNS1Q8NEH6 495 aa4.39□□□□□ -1.71
CLTC-209ENST00000498711 RUBCNQ92622 972 aa4.39□□□□□ -1.71
CLTC-209ENST00000498711 PAGE5Q96GU1 130 aa4.39□□□□□ -1.71
CLTC-209ENST00000498711 CTAGE1Q96RT6 745 aa4.39□□□□□ -1.71
CLTC-209ENST00000498711 KRT23Q9C075 422 aa4.39□□□□□ -1.71
CLTC-209ENST00000498711 TNKS2Q9H2K2 1166 aa4.39□□□□□ -1.71
CLTC-209ENST00000498711 ARFGAP3Q9NP61 516 aa4.39□□□□□ -1.71
CLTC-209ENST00000498711 ZSWIM5Q9P217 1185 aa4.39□□□□□ -1.71
CLTC-209ENST00000498711 CEP131Q9UPN4 1083 aa4.39□□□□□ -1.71
CLTC-209ENST00000498711 LEMD3Q9Y2U8 911 aa4.39□□□□□ -1.71
CLTC-209ENST00000498711 NFE2L3Q9Y4A8 694 aa4.39□□□□□ -1.71
CLTC-209ENST00000498711 CD2APQ9Y5K6 639 aa4.39□□□□□ -1.71
CLTC-209ENST00000498711 DUOX1Q9NRD9 1551 aa4.39□□□□□ -1.71
CLTC-209ENST00000498711 A0A087X0B3 334 aa4.39□□□□□ -1.71
CLTC-209ENST00000498711 ERVV-1B6SEH8 477 aa4.39□□□□□ -1.71
CLTC-209ENST00000498711 TEX33O43247 280 aa4.39□□□□□ -1.71
CLTC-209ENST00000498711 CPP00450 1065 aa4.39□□□□□ -1.71
CLTC-209ENST00000498711 CCDC175P0C221 793 aa4.39□□□□□ -1.71
CLTC-209ENST00000498711 GNAT2P19087 354 aa4.39□□□□□ -1.71
CLTC-209ENST00000498711 GUCY1A2P33402 732 aa4.39□□□□□ -1.71
CLTC-209ENST00000498711 PIP4K2AP48426 406 aaPredicted RBP4.39□□□□□ -1.71
CLTC-209ENST00000498711 HAND2P61296 217 aa4.39□□□□□ -1.71
CLTC-209ENST00000498711 GNG11P61952 73 aa4.39□□□□□ -1.71
CLTC-209ENST00000498711 TNP2Q05952 138 aa4.39□□□□□ -1.71
CLTC-209ENST00000498711 GOLGA8FQ08AF8 430 aa4.39□□□□□ -1.71
CLTC-209ENST00000498711 GOLGA8DPQ0D2H9 430 aa4.39□□□□□ -1.71
CLTC-209ENST00000498711 TRIM14Q14142 442 aa4.39□□□□□ -1.71
CLTC-209ENST00000498711 ZRSR1Q15695 479 aaKnown RBP4.39□□□□□ -1.71
CLTC-209ENST00000498711 CCDC57Q2TAC2 916 aa4.39□□□□□ -1.71
CLTC-209ENST00000498711 AKNAD1Q5T1N1 836 aa4.39□□□□□ -1.71
CLTC-209ENST00000498711 PAPD7Q5XG87 772 aaKnown RBP4.39□□□□□ -1.71
CLTC-209ENST00000498711 HDXQ7Z353 690 aa4.39□□□□□ -1.71
CLTC-209ENST00000498711 TMTC1Q8IUR5 882 aa4.39□□□□□ -1.71
CLTC-209ENST00000498711 ZNF507Q8TCN5 953 aa4.39□□□□□ -1.71
CLTC-209ENST00000498711 BHMTQ93088 406 aa4.39□□□□□ -1.71
CLTC-209ENST00000498711 FERMT2Q96AC1 680 aa4.39□□□□□ -1.71
CLTC-209ENST00000498711 RNF26Q9BY78 433 aaPredicted RBP4.39□□□□□ -1.71
CLTC-209ENST00000498711 SAMSN1Q9NSI8 373 aaKnown RBP4.39□□□□□ -1.71
CLTC-209ENST00000498711 ADAM21Q9UKJ8 722 aa4.39□□□□□ -1.71
CLTC-209ENST00000498711 ZNF532Q9HCE3 1301 aa4.39□□□□□ -1.71
CLTC-209ENST00000498711 A0A1W2PQC6 194 aa4.39□□□□□ -1.71
CLTC-209ENST00000498711 TARSL2A2RTX5 802 aaKnown RBP4.39□□□□□ -1.71
CLTC-209ENST00000498711 GOLGA8AA7E2F4 631 aa4.39□□□□□ -1.71
CLTC-209ENST00000498711 BTBD18B2RXH4 712 aa4.39□□□□□ -1.71
CLTC-209ENST00000498711 PSMD14O00487 310 aa4.39□□□□□ -1.71
CLTC-209ENST00000498711 PDE8BO95263 885 aa4.39□□□□□ -1.71
CLTC-209ENST00000498711 GJB6O95452 261 aa4.39□□□□□ -1.71
CLTC-209ENST00000498711 S100BP04271 92 aaPredicted RBP4.39□□□□□ -1.71
CLTC-209ENST00000498711 MAPTP10636 758 aaKnown RBP4.39□□□□□ -1.71
CLTC-209ENST00000498711 NME2P22392 152 aa4.39□□□□□ -1.71
CLTC-209ENST00000498711 POLD1P28340 1107 aa4.39□□□□□ -1.71
CLTC-209ENST00000498711 ACTN2P35609 894 aa4.39□□□□□ -1.71
CLTC-209ENST00000498711 NT5C2P49902 561 aa4.39□□□□□ -1.71
CLTC-209ENST00000498711 ADKP55263 362 aaKnown RBP4.39□□□□□ -1.71
CLTC-209ENST00000498711 CLCQ05315 142 aa4.39□□□□□ -1.71
CLTC-209ENST00000498711 TRDNQ13061 729 aa4.39□□□□□ -1.71
CLTC-209ENST00000498711 LRRC14Q15048 493 aa4.39□□□□□ -1.71
CLTC-209ENST00000498711 COBLL1Q53SF7 1204 aa4.39□□□□□ -1.71
CLTC-209ENST00000498711 RASIP1Q5U651 963 aa4.39□□□□□ -1.71
CLTC-209ENST00000498711 TRAPPC11Q7Z392 1133 aa4.39□□□□□ -1.71
CLTC-209ENST00000498711 NLRP10Q86W26 655 aa4.39□□□□□ -1.71
CLTC-209ENST00000498711 ZNF34Q8IZ26 560 aa4.39□□□□□ -1.71
CLTC-209ENST00000498711 C4orf32Q8N8J7 132 aa4.39□□□□□ -1.71
CLTC-209ENST00000498711 SYTL4Q96C24 671 aaPredicted RBP4.39□□□□□ -1.71
CLTC-209ENST00000498711 PNKPQ96T60 521 aa4.39□□□□□ -1.71
CLTC-209ENST00000498711 CLEC4MQ9H2X3 399 aaPredicted RBP4.39□□□□□ -1.71
CLTC-209ENST00000498711 TYW1Q9NV66 732 aaKnown RBP4.39□□□□□ -1.71
CLTC-209ENST00000498711 MARK1Q9P0L2 795 aa4.39□□□□□ -1.71
CLTC-209ENST00000498711 RWDD2AQ9UIY3 292 aa4.39□□□□□ -1.71
CLTC-209ENST00000498711 PCDHB6Q9Y5E3 794 aa4.39□□□□□ -1.71
CLTC-209ENST00000498711 MROH5Q6ZUA9 1318 aa4.38□□□□□ -1.71
CLTC-209ENST00000498711 B4E1Z4 1266 aa4.38□□□□□ -1.71
CLTC-209ENST00000498711 PRPF6O94906 941 aaKnown RBP4.38□□□□□ -1.71
CLTC-209ENST00000498711 GYPCP04921 128 aa4.38□□□□□ -1.71
CLTC-209ENST00000498711 ZNF157P51786 506 aaPredicted RBP4.38□□□□□ -1.71
CLTC-209ENST00000498711 CTSWP56202 376 aa4.38□□□□□ -1.71
CLTC-209ENST00000498711 ERVK-24P63145 666 aa4.38□□□□□ -1.71
CLTC-209ENST00000498711 CDK17Q00537 523 aa4.38□□□□□ -1.71
CLTC-209ENST00000498711 ITIH3Q06033 890 aa4.38□□□□□ -1.71
CLTC-209ENST00000498711 IFIT5Q13325 482 aaKnown RBP4.38□□□□□ -1.71
CLTC-209ENST00000498711 MEA1Q16626 185 aa4.38□□□□□ -1.71
CLTC-209ENST00000498711 HSP90AB3PQ58FF7 597 aa4.38□□□□□ -1.71
CLTC-209ENST00000498711 EMC10Q5UCC4 262 aa4.38□□□□□ -1.71
CLTC-209ENST00000498711 LLGL2Q6P1M3 1020 aa4.38□□□□□ -1.71
CLTC-209ENST00000498711 DIS3L2Q8IYB7 885 aaKnown RBP4.38□□□□□ -1.71
CLTC-209ENST00000498711 SYNPOQ8N3V7 929 aa4.38□□□□□ -1.71
CLTC-209ENST00000498711 C19orf47Q8N9M1 422 aaKnown RBP4.38□□□□□ -1.71
CLTC-209ENST00000498711 FAM71BQ8TC56 605 aa4.38□□□□□ -1.71
CLTC-209ENST00000498711 LPIN2Q92539 896 aa4.38□□□□□ -1.71
CLTC-209ENST00000498711 PHKBQ93100 1093 aa4.38□□□□□ -1.71
CLTC-209ENST00000498711 PYM1Q9BRP8 204 aaKnown RBP4.38□□□□□ -1.71
CLTC-209ENST00000498711 PBX4Q9BYU1 374 aa4.38□□□□□ -1.71
CLTC-209ENST00000498711 CSRNP2Q9H175 543 aa4.38□□□□□ -1.71
CLTC-209ENST00000498711 MUC3BQ9H195 1237 aa4.38□□□□□ -1.71
CLTC-209ENST00000498711 EPC1Q9H2F5 836 aa4.38□□□□□ -1.71
CLTC-209ENST00000498711 RASSF4Q9H2L5 321 aa4.38□□□□□ -1.71
CLTC-209ENST00000498711 EHMT1Q9H9B1 1298 aa4.38□□□□□ -1.71
CLTC-209ENST00000498711 REXO2Q9Y3B8 237 aaKnown RBP4.38□□□□□ -1.71
CLTC-209ENST00000498711 CCDC196A0A1B0GTZ2 297 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms