RNA–Protein interactions for RNA: ENST00000498534.5

CNOT4-211, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-211ENST00000498534 AGO3Q9H9G7 860 aaKnown RBP13.73□□□□□ -0.21
CNOT4-211ENST00000498534 PRKAG3Q9UGI9 489 aa13.73□□□□□ -0.21
CNOT4-211ENST00000498534 COL4A6Q14031 1691 aa13.72□□□□□ -0.21
CNOT4-211ENST00000498534 POTEB3A0JP26 581 aa13.72□□□□□ -0.21
CNOT4-211ENST00000498534 SMCO2A6NFE2 343 aa13.72□□□□□ -0.21
CNOT4-211ENST00000498534 hCG_1984214I3L0E3 225 aa13.72□□□□□ -0.21
CNOT4-211ENST00000498534 ZBTB43O43298 467 aa13.72□□□□□ -0.21
CNOT4-211ENST00000498534 ARP10275 920 aa13.72□□□□□ -0.21
CNOT4-211ENST00000498534 ADCY7P51828 1080 aa13.72□□□□□ -0.21
CNOT4-211ENST00000498534 TMEM62Q0P6H9 643 aa13.72□□□□□ -0.21
CNOT4-211ENST00000498534 COL9A3Q14050 684 aaPredicted RBP13.72□□□□□ -0.21
CNOT4-211ENST00000498534 COL19A1Q14993 1142 aa13.72□□□□□ -0.21
CNOT4-211ENST00000498534 PLCB4Q15147 1175 aa13.72□□□□□ -0.21
CNOT4-211ENST00000498534 RTN1Q16799 776 aa13.72□□□□□ -0.21
CNOT4-211ENST00000498534 CSPP1Q1MSJ5 1256 aa13.72□□□□□ -0.21
CNOT4-211ENST00000498534 NAALADL2Q58DX5 795 aa13.72□□□□□ -0.21
CNOT4-211ENST00000498534 WWC2Q6AWC2 1192 aa13.72□□□□□ -0.21
CNOT4-211ENST00000498534 PPP1R18Q6NYC8 613 aa13.72□□□□□ -0.21
CNOT4-211ENST00000498534 APOA5Q6Q788 366 aa13.72□□□□□ -0.21
CNOT4-211ENST00000498534 POTEBQ6S5H4 581 aa13.72□□□□□ -0.21
CNOT4-211ENST00000498534 DHX32Q7L7V1 743 aaKnown RBP13.72□□□□□ -0.21
CNOT4-211ENST00000498534 ZNF713Q8N859 430 aaPredicted RBP13.72□□□□□ -0.21
CNOT4-211ENST00000498534 CYP2W1Q8TAV3 490 aa13.72□□□□□ -0.21
CNOT4-211ENST00000498534 PPP2R3CQ969Q6 453 aa13.72□□□□□ -0.21
CNOT4-211ENST00000498534 ZNF689Q96CS4 500 aaPredicted RBP13.72□□□□□ -0.21
CNOT4-211ENST00000498534 DCBLD2Q96PD2 775 aa13.72□□□□□ -0.21
CNOT4-211ENST00000498534 PCYT2Q99447 389 aa13.72□□□□□ -0.21
CNOT4-211ENST00000498534 CELF4Q9BZC1 486 aaKnown RBP13.72□□□□□ -0.21
CNOT4-211ENST00000498534 UPF3BQ9BZI7 483 aaKnown RBP13.72□□□□□ -0.21
CNOT4-211ENST00000498534 PADI3Q9ULW8 664 aa13.72□□□□□ -0.21
CNOT4-211ENST00000498534 TRPV2Q9Y5S1 764 aa13.72□□□□□ -0.21
CNOT4-211ENST00000498534 RALGAPA2Q2PPJ7 1873 aa13.72□□□□□ -0.21
CNOT4-211ENST00000498534 NLRC5Q86WI3 1866 aa13.72□□□□□ -0.21
CNOT4-211ENST00000498534 TTC3P53804 2025 aa13.71□□□□□ -0.21
CNOT4-211ENST00000498534 SMIM35A0A1B0GVV1 85 aa13.71□□□□□ -0.21
CNOT4-211ENST00000498534 PRR33A8MZF0 331 aa13.71□□□□□ -0.21
CNOT4-211ENST00000498534 MEIS1O00470 390 aa13.71□□□□□ -0.21
CNOT4-211ENST00000498534 BACH1O14867 736 aa13.71□□□□□ -0.21
CNOT4-211ENST00000498534 KRT76Q01546 638 aa13.71□□□□□ -0.21
CNOT4-211ENST00000498534 PAK2Q13177 524 aa13.71□□□□□ -0.21
CNOT4-211ENST00000498534 FAM160B1Q5W0V3 765 aa13.71□□□□□ -0.21
CNOT4-211ENST00000498534 RTN4RL1Q86UN2 441 aaPredicted RBP13.71□□□□□ -0.21
CNOT4-211ENST00000498534 NPAS4Q8IUM7 802 aa13.71□□□□□ -0.21
CNOT4-211ENST00000498534 CMTR2Q8IYT2 770 aaKnown RBP13.71□□□□□ -0.21
CNOT4-211ENST00000498534 P2RX5Q93086 422 aa13.71□□□□□ -0.21
CNOT4-211ENST00000498534 ZBTB10Q96DT7 871 aa13.71□□□□□ -0.21
CNOT4-211ENST00000498534 UIMC1Q96RL1 719 aa13.71□□□□□ -0.21
CNOT4-211ENST00000498534 IGFLR1Q9H665 355 aa13.71□□□□□ -0.21
CNOT4-211ENST00000498534 AGO4Q9HCK5 861 aaKnown RBP13.71□□□□□ -0.21
CNOT4-211ENST00000498534 ALG13Q9NP73 1137 aaKnown RBP13.71□□□□□ -0.21
CNOT4-211ENST00000498534 C11orf16Q9NQ32 467 aa13.71□□□□□ -0.21
CNOT4-211ENST00000498534 LRFN2Q9ULH4 789 aa13.71□□□□□ -0.21
CNOT4-211ENST00000498534 PLAGL2Q9UPG8 496 aa13.71□□□□□ -0.21
CNOT4-211ENST00000498534 IGSF9BQ9UPX0 1349 aa13.7□□□□□ -0.22
CNOT4-211ENST00000498534 HBP1O60381 514 aa13.7□□□□□ -0.22
CNOT4-211ENST00000498534 ATG7O95352 703 aa13.7□□□□□ -0.22
CNOT4-211ENST00000498534 KLRC1P26715 233 aa13.7□□□□□ -0.22
CNOT4-211ENST00000498534 SREBF1P36956 1147 aa13.7□□□□□ -0.22
CNOT4-211ENST00000498534 FGD1P98174 961 aa13.7□□□□□ -0.22
CNOT4-211ENST00000498534 EXOSC10Q01780 885 aaKnown RBP13.7□□□□□ -0.22
CNOT4-211ENST00000498534 HYAL1Q12794 435 aa13.7□□□□□ -0.22
CNOT4-211ENST00000498534 AP3B2Q13367 1082 aa13.7□□□□□ -0.22
CNOT4-211ENST00000498534 KRT32Q14532 448 aa13.7□□□□□ -0.22
CNOT4-211ENST00000498534 CTC1Q2NKJ3 1217 aa13.7□□□□□ -0.22
CNOT4-211ENST00000498534 ODR4Q5SWX8 454 aa13.7□□□□□ -0.22
CNOT4-211ENST00000498534 MTHFD1LQ6UB35 978 aa13.7□□□□□ -0.22
CNOT4-211ENST00000498534 NIPA1Q7RTP0 329 aa13.7□□□□□ -0.22
CNOT4-211ENST00000498534 TRAPPC12Q8WVT3 735 aa13.7□□□□□ -0.22
CNOT4-211ENST00000498534 FAM212AQ96EL1 285 aa13.7□□□□□ -0.22
CNOT4-211ENST00000498534 PGBD1Q96JS3 809 aa13.7□□□□□ -0.22
CNOT4-211ENST00000498534 ANO3Q9BYT9 981 aa13.7□□□□□ -0.22
CNOT4-211ENST00000498534 RC3H2Q9HBD1 1191 aaKnown RBP13.7□□□□□ -0.22
CNOT4-211ENST00000498534 BARHL2Q9NY43 387 aa13.7□□□□□ -0.22
CNOT4-211ENST00000498534 BRPF3Q9ULD4 1205 aa13.7□□□□□ -0.22
CNOT4-211ENST00000498534 NAP1L2Q9ULW6 460 aaPredicted RBP13.7□□□□□ -0.22
CNOT4-211ENST00000498534 CNTNAP5Q8WYK1 1306 aa13.69□□□□□ -0.22
CNOT4-211ENST00000498534 KDM3AQ9Y4C1 1321 aa13.69□□□□□ -0.22
CNOT4-211ENST00000498534 CCDC196A0A1B0GTZ2 297 aa13.69□□□□□ -0.22
CNOT4-211ENST00000498534 GOLGA8AA7E2F4 631 aa13.69□□□□□ -0.22
CNOT4-211ENST00000498534 GOLGA8BA8MQT2 603 aa13.69□□□□□ -0.22
CNOT4-211ENST00000498534 STXBP3O00186 592 aa13.69□□□□□ -0.22
CNOT4-211ENST00000498534 DCXO43602 365 aa13.69□□□□□ -0.22
CNOT4-211ENST00000498534 MMP1P03956 469 aa13.69□□□□□ -0.22
CNOT4-211ENST00000498534 HMGB1P09429 215 aaKnown RBP13.69□□□□□ -0.22
CNOT4-211ENST00000498534 LINC00271P0C7V0 271 aa13.69□□□□□ -0.22
CNOT4-211ENST00000498534 SCG2P13521 617 aa13.69□□□□□ -0.22
CNOT4-211ENST00000498534 LTBRP36941 435 aa13.69□□□□□ -0.22
CNOT4-211ENST00000498534 NFX1Q12986 1120 aaKnown RBP13.69□□□□□ -0.22
CNOT4-211ENST00000498534 ITGB3BPQ13352 177 aaPredicted RBP13.69□□□□□ -0.22
CNOT4-211ENST00000498534 TSGA10IPQ3SY00 556 aa13.69□□□□□ -0.22
CNOT4-211ENST00000498534 BMP2KLQ5H9B9 411 aa13.69□□□□□ -0.22
CNOT4-211ENST00000498534 MCTP2Q6DN12 878 aa13.69□□□□□ -0.22
CNOT4-211ENST00000498534 TYW1BQ6NUM6 668 aa13.69□□□□□ -0.22
CNOT4-211ENST00000498534 MIS18BP1Q6P0N0 1132 aa13.69□□□□□ -0.22
CNOT4-211ENST00000498534 PLA2G4DQ86XP0 818 aa13.69□□□□□ -0.22
CNOT4-211ENST00000498534 ADHFE1Q8IWW8 467 aa13.69□□□□□ -0.22
CNOT4-211ENST00000498534 POP1Q99575 1024 aaKnown RBP13.69□□□□□ -0.22
CNOT4-211ENST00000498534 GINS2Q9Y248 185 aa13.69□□□□□ -0.22
CNOT4-211ENST00000498534 PCDHB7Q9Y5E2 793 aa13.69□□□□□ -0.22
CNOT4-211ENST00000498534 MRPL42Q9Y6G3 142 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms