RNA–Protein interactions for RNA: ENST00000498213.1

USP54-217, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 815 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-217ENST00000498213 RRS1Q15050 365 aaKnown RBP5.34□□□□□ -1.55
USP54-217ENST00000498213 HSF5Q4G112 596 aaPredicted RBP5.34□□□□□ -1.55
USP54-217ENST00000498213 ANKRD39Q53RE8 183 aa5.34□□□□□ -1.55
USP54-217ENST00000498213 PRR5LQ6MZQ0 368 aa5.34□□□□□ -1.55
USP54-217ENST00000498213 CYP2R1Q6VVX0 501 aa5.34□□□□□ -1.55
USP54-217ENST00000498213 C19orf47Q8N9M1 422 aaKnown RBP5.34□□□□□ -1.55
USP54-217ENST00000498213 NUP43Q8NFH3 380 aa5.34□□□□□ -1.55
USP54-217ENST00000498213 ADCY4Q8NFM4 1077 aa5.34□□□□□ -1.55
USP54-217ENST00000498213 ANAPC16Q96DE5 110 aa5.34□□□□□ -1.55
USP54-217ENST00000498213 MASTLQ96GX5 879 aa5.34□□□□□ -1.55
USP54-217ENST00000498213 SEC16BQ96JE7 1060 aa5.34□□□□□ -1.55
USP54-217ENST00000498213 HAUS7Q99871 368 aa5.34□□□□□ -1.55
USP54-217ENST00000498213 KRTAP9-3Q9BYQ3 159 aa5.34□□□□□ -1.55
USP54-217ENST00000498213 SIRT5Q9NXA8 310 aa5.34□□□□□ -1.55
USP54-217ENST00000498213 GPRC5DQ9NZD1 345 aa5.34□□□□□ -1.55
USP54-217ENST00000498213 WHRNQ9P202 907 aa5.34□□□□□ -1.55
USP54-217ENST00000498213 PGAP2Q9UHJ9 254 aa5.34□□□□□ -1.55
USP54-217ENST00000498213 NARFQ9UHQ1 456 aa5.34□□□□□ -1.55
USP54-217ENST00000498213 STRIP2Q9ULQ0 834 aa5.34□□□□□ -1.55
USP54-217ENST00000498213 PTPN22Q9Y2R2 807 aa5.34□□□□□ -1.55
USP54-217ENST00000498213 ZNF451Q9Y4E5 1061 aa5.34□□□□□ -1.55
USP54-217ENST00000498213 LTN1O94822 1766 aa5.34□□□□□ -1.56
USP54-217ENST00000498213 RPTORQ8N122 1335 aa5.33□□□□□ -1.56
USP54-217ENST00000498213 ITGB4P16144 1822 aa5.33□□□□□ -1.56
USP54-217ENST00000498213 SHTN1A0MZ66 631 aa5.33□□□□□ -1.56
USP54-217ENST00000498213 FADS2P1A8MWK0 482 aa5.33□□□□□ -1.56
USP54-217ENST00000498213 ADM5C9JUS6 153 aa5.33□□□□□ -1.56
USP54-217ENST00000498213 PPM1BO75688 479 aa5.33□□□□□ -1.56
USP54-217ENST00000498213 MPOP05164 745 aa5.33□□□□□ -1.56
USP54-217ENST00000498213 PRKCAP17252 672 aa5.33□□□□□ -1.56
USP54-217ENST00000498213 ERCC5P28715 1186 aaPredicted RBP5.33□□□□□ -1.56
USP54-217ENST00000498213 GMPSP49915 693 aaPredicted RBP5.33□□□□□ -1.56
USP54-217ENST00000498213 LINC00310P59036 64 aa5.33□□□□□ -1.56
USP54-217ENST00000498213 CYP4F8P98187 520 aa5.33□□□□□ -1.56
USP54-217ENST00000498213 TMEM62Q0P6H9 643 aa5.33□□□□□ -1.56
USP54-217ENST00000498213 GNL2Q13823 731 aaKnown RBP5.33□□□□□ -1.56
USP54-217ENST00000498213 HLA-DQA1Q5Y7H0 255 aa5.33□□□□□ -1.56
USP54-217ENST00000498213 TBC1D9BQ66K14 1250 aa5.33□□□□□ -1.56
USP54-217ENST00000498213 VPS37DQ86XT2 251 aa5.33□□□□□ -1.56
USP54-217ENST00000498213 RASAL3Q86YV0 1011 aa5.33□□□□□ -1.56
USP54-217ENST00000498213 RTKN2Q8IZC4 609 aa5.33□□□□□ -1.56
USP54-217ENST00000498213 ARMC5Q96C12 935 aa5.33□□□□□ -1.56
USP54-217ENST00000498213 SHISA4Q96DD7 197 aa5.33□□□□□ -1.56
USP54-217ENST00000498213 PLCD4Q9BRC7 762 aa5.33□□□□□ -1.56
USP54-217ENST00000498213 ZNF552Q9H707 407 aaPredicted RBP5.33□□□□□ -1.56
USP54-217ENST00000498213 PCDHB10Q9UN67 800 aa5.33□□□□□ -1.56
USP54-217ENST00000498213 SUGT1Q9Y2Z0 365 aa5.33□□□□□ -1.56
USP54-217ENST00000498213 SLX4Q8IY92 1834 aa5.32□□□□□ -1.56
USP54-217ENST00000498213 RGPD2P0DJD1 1756 aa5.32□□□□□ -1.56
USP54-217ENST00000498213 TEX51A0A1B0GUA7 166 aa5.32□□□□□ -1.56
USP54-217ENST00000498213 A0A1W2PPC1 479 aa5.32□□□□□ -1.56
USP54-217ENST00000498213 A0A1W2PQH9 124 aa5.32□□□□□ -1.56
USP54-217ENST00000498213 NOTOA8MTQ0 251 aa5.32□□□□□ -1.56
USP54-217ENST00000498213 ABLIM1O14639 778 aa5.32□□□□□ -1.56
USP54-217ENST00000498213 SSBP05455 408 aaKnown RBP eCLIP5.32□□□□□ -1.56
USP54-217ENST00000498213 PHKG2P15735 406 aa5.32□□□□□ -1.56
USP54-217ENST00000498213 HOXA5P20719 270 aa5.32□□□□□ -1.56
USP54-217ENST00000498213 SDHBP21912 280 aa5.32□□□□□ -1.56
USP54-217ENST00000498213 SRSF3P84103 164 aaKnown RBP5.32□□□□□ -1.56
USP54-217ENST00000498213 RAB3GAP1Q15042 981 aa5.32□□□□□ -1.56
USP54-217ENST00000498213 KRT26Q7Z3Y9 468 aa5.32□□□□□ -1.56
USP54-217ENST00000498213 SLCO6A1Q86UG4 719 aa5.32□□□□□ -1.56
USP54-217ENST00000498213 COG3Q96JB2 828 aa5.32□□□□□ -1.56
USP54-217ENST00000498213 ZNF333Q96JL9 665 aa5.32□□□□□ -1.56
USP54-217ENST00000498213 SLC12A9Q9BXP2 914 aa5.32□□□□□ -1.56
USP54-217ENST00000498213 IRF2BPLQ9H1B7 796 aa5.32□□□□□ -1.56
USP54-217ENST00000498213 IMPACTQ9P2X3 320 aa5.32□□□□□ -1.56
USP54-217ENST00000498213 DIS3Q9Y2L1 958 aaKnown RBP5.32□□□□□ -1.56
USP54-217ENST00000498213 NR2E3Q9Y5X4 410 aa5.32□□□□□ -1.56
USP54-217ENST00000498213 HTTP42858 3142 aa5.32□□□□□ -1.56
USP54-217ENST00000498213 DLEC1Q9Y238 1755 aa5.32□□□□□ -1.56
USP54-217ENST00000498213 CENPFP49454 3210 aa5.31□□□□□ -1.56
USP54-217ENST00000498213 MYH14Q7Z406 1995 aaKnown RBP5.31□□□□□ -1.56
USP54-217ENST00000498213 SOS1Q07889 1333 aaPredicted RBP5.31□□□□□ -1.56
USP54-217ENST00000498213 IRS2Q9Y4H2 1338 aa5.31□□□□□ -1.56
USP54-217ENST00000498213 A0A087WZG4 1122 aa5.31□□□□□ -1.56
USP54-217ENST00000498213 NUDT19A8MXV4 375 aa5.31□□□□□ -1.56
USP54-217ENST00000498213 RFXAPO00287 272 aa5.31□□□□□ -1.56
USP54-217ENST00000498213 CBFA2T2O43439 604 aa5.31□□□□□ -1.56
USP54-217ENST00000498213 EPHX1P07099 455 aa5.31□□□□□ -1.56
USP54-217ENST00000498213 NAT2P11245 290 aa5.31□□□□□ -1.56
USP54-217ENST00000498213 DLG4P78352 724 aa5.31□□□□□ -1.56
USP54-217ENST00000498213 HSP90AB2PQ58FF8 381 aa5.31□□□□□ -1.56
USP54-217ENST00000498213 RTP2Q5QGT7 225 aa5.31□□□□□ -1.56
USP54-217ENST00000498213 VHLLQ6RSH7 139 aa5.31□□□□□ -1.56
USP54-217ENST00000498213 DNAJC10Q8IXB1 793 aa5.31□□□□□ -1.56
USP54-217ENST00000498213 IFNL2Q8IZJ0 200 aa5.31□□□□□ -1.56
USP54-217ENST00000498213 CD99L2Q8TCZ2 262 aa5.31□□□□□ -1.56
USP54-217ENST00000498213 SHDQ96IW2 340 aa5.31□□□□□ -1.56
USP54-217ENST00000498213 C20orf173Q96LM9 149 aa5.31□□□□□ -1.56
USP54-217ENST00000498213 FGD4Q96M96 766 aa5.31□□□□□ -1.56
USP54-217ENST00000498213 GUCD1Q96NT3 240 aa5.31□□□□□ -1.56
USP54-217ENST00000498213 JMJD8Q96S16 334 aa5.31□□□□□ -1.56
USP54-217ENST00000498213 CNOT6Q9ULM6 557 aaKnown RBP5.31□□□□□ -1.56
USP54-217ENST00000498213 AFDNP55196 1824 aaKnown RBP5.31□□□□□ -1.56
USP54-217ENST00000498213 COL4A5P29400 1685 aa5.31□□□□□ -1.56
USP54-217ENST00000498213 MYOCOSA0A1B0GUC4 107 aa5.3□□□□□ -1.56
USP54-217ENST00000498213 HRKO00198 91 aa5.3□□□□□ -1.56
USP54-217ENST00000498213 IFNGR1P15260 489 aa5.3□□□□□ -1.56
USP54-217ENST00000498213 TCF3P15923 654 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms