RNA–Protein interactions for RNA: ENST00000498091.1

RTN4IP1-203, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 2

Gene RTN4IP1, Length 433 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-203ENST00000498091 UNC5AQ6ZN44 842 aa4.37□□□□□ -1.71
RTN4IP1-203ENST00000498091 C15orf52Q6ZUT6 534 aaKnown RBP4.37□□□□□ -1.71
RTN4IP1-203ENST00000498091 PDZD3Q86UT5 571 aa4.37□□□□□ -1.71
RTN4IP1-203ENST00000498091 HSCBQ8IWL3 235 aa4.37□□□□□ -1.71
RTN4IP1-203ENST00000498091 NIM1KQ8IY84 436 aa4.37□□□□□ -1.71
RTN4IP1-203ENST00000498091 SPATA5Q8NB90 893 aa4.37□□□□□ -1.71
RTN4IP1-203ENST00000498091 GRAPLQ8TC17 118 aaPredicted RBP4.37□□□□□ -1.71
RTN4IP1-203ENST00000498091 CHAC2Q8WUX2 184 aa4.37□□□□□ -1.71
RTN4IP1-203ENST00000498091 SLC7A3Q8WY07 619 aa4.37□□□□□ -1.71
RTN4IP1-203ENST00000498091 MAP4K1Q92918 833 aa4.37□□□□□ -1.71
RTN4IP1-203ENST00000498091 NINJ1Q92982 152 aa4.37□□□□□ -1.71
RTN4IP1-203ENST00000498091 MFSD3Q96ES6 412 aa4.37□□□□□ -1.71
RTN4IP1-203ENST00000498091 CAMKK2Q96RR4 588 aa4.37□□□□□ -1.71
RTN4IP1-203ENST00000498091 CRAMP1Q96RY5 1269 aa4.37□□□□□ -1.71
RTN4IP1-203ENST00000498091 BRIP1Q9BX63 1249 aa4.37□□□□□ -1.71
RTN4IP1-203ENST00000498091 ZC3H12CQ9C0D7 883 aaKnown RBP4.37□□□□□ -1.71
RTN4IP1-203ENST00000498091 ADAM19Q9H013 955 aa4.37□□□□□ -1.71
RTN4IP1-203ENST00000498091 LSG1Q9H089 658 aaKnown RBP4.37□□□□□ -1.71
RTN4IP1-203ENST00000498091 BOLA2Q9H3K6 86 aa4.37□□□□□ -1.71
RTN4IP1-203ENST00000498091 LRRC4CQ9HCJ2 640 aa4.37□□□□□ -1.71
RTN4IP1-203ENST00000498091 SH2B1Q9NRF2 756 aaPredicted RBP4.37□□□□□ -1.71
RTN4IP1-203ENST00000498091 GNL3LQ9NVN8 582 aaKnown RBP4.37□□□□□ -1.71
RTN4IP1-203ENST00000498091 ATP8A1Q9Y2Q0 1164 aa4.37□□□□□ -1.71
RTN4IP1-203ENST00000498091 CORINQ9Y5Q5 1042 aa4.37□□□□□ -1.71
RTN4IP1-203ENST00000498091 COL4A1P02462 1669 aa4.37□□□□□ -1.71
RTN4IP1-203ENST00000498091 ZMYM6O95789 1325 aa4.37□□□□□ -1.71
RTN4IP1-203ENST00000498091 PNPLA7Q6ZV29 1317 aa4.37□□□□□ -1.71
RTN4IP1-203ENST00000498091 RPAP1Q9BWH6 1393 aaPredicted RBP4.37□□□□□ -1.71
RTN4IP1-203ENST00000498091 KIF13BQ9NQT8 1826 aa4.37□□□□□ -1.71
RTN4IP1-203ENST00000498091 GOLGB1Q14789 3259 aaKnown RBP4.36□□□□□ -1.71
RTN4IP1-203ENST00000498091 A0A0D9SFI3 127 aa4.36□□□□□ -1.71
RTN4IP1-203ENST00000498091 GOLIM4O00461 696 aa4.36□□□□□ -1.71
RTN4IP1-203ENST00000498091 SOX1O00570 391 aaPredicted RBP4.36□□□□□ -1.71
RTN4IP1-203ENST00000498091 NPHP1O15259 732 aa4.36□□□□□ -1.71
RTN4IP1-203ENST00000498091 SUSD5O60279 629 aa4.36□□□□□ -1.71
RTN4IP1-203ENST00000498091 TAF5LO75529 589 aa4.36□□□□□ -1.71
RTN4IP1-203ENST00000498091 SERPINB2P05120 415 aa4.36□□□□□ -1.71
RTN4IP1-203ENST00000498091 NME1P15531 152 aaKnown RBP4.36□□□□□ -1.71
RTN4IP1-203ENST00000498091 PLCG1P19174 1290 aa4.36□□□□□ -1.71
RTN4IP1-203ENST00000498091 ADORA1P30542 326 aa4.36□□□□□ -1.71
RTN4IP1-203ENST00000498091 PDE6BP35913 854 aa4.36□□□□□ -1.71
RTN4IP1-203ENST00000498091 MCAMP43121 646 aa4.36□□□□□ -1.71
RTN4IP1-203ENST00000498091 CDKN1CP49918 316 aaPredicted RBP4.36□□□□□ -1.71
RTN4IP1-203ENST00000498091 RHBDL3P58872 404 aa4.36□□□□□ -1.71
RTN4IP1-203ENST00000498091 GSTM4Q03013 218 aa4.36□□□□□ -1.71
RTN4IP1-203ENST00000498091 MAP3K12Q12852 859 aa4.36□□□□□ -1.71
RTN4IP1-203ENST00000498091 NMIQ13287 307 aaPredicted RBP4.36□□□□□ -1.71
RTN4IP1-203ENST00000498091 KRT32Q14532 448 aa4.36□□□□□ -1.71
RTN4IP1-203ENST00000498091 ZYXQ15942 572 aaKnown RBP4.36□□□□□ -1.71
RTN4IP1-203ENST00000498091 SLC15A2Q16348 729 aa4.36□□□□□ -1.71
RTN4IP1-203ENST00000498091 LONRF2Q1L5Z9 754 aa4.36□□□□□ -1.71
RTN4IP1-203ENST00000498091 MCMDC2Q4G0Z9 681 aa4.36□□□□□ -1.71
RTN4IP1-203ENST00000498091 TM4SF20Q53R12 229 aa4.36□□□□□ -1.71
RTN4IP1-203ENST00000498091 CAVIN4Q5BKX8 364 aa4.36□□□□□ -1.71
RTN4IP1-203ENST00000498091 CT47A1Q5JQC4 288 aaPredicted RBP4.36□□□□□ -1.71
RTN4IP1-203ENST00000498091 WIPI1Q5MNZ9 446 aaPredicted RBP4.36□□□□□ -1.71
RTN4IP1-203ENST00000498091 OVOS1Q6IE37 1185 aa4.36□□□□□ -1.71
RTN4IP1-203ENST00000498091 KIAA1211LQ6NV74 962 aa4.36□□□□□ -1.71
RTN4IP1-203ENST00000498091 LRRC47Q8N1G4 583 aaKnown RBP4.36□□□□□ -1.71
RTN4IP1-203ENST00000498091 TAB3Q8N5C8 712 aaPredicted RBP4.36□□□□□ -1.71
RTN4IP1-203ENST00000498091 GPBAR1Q8TDU6 330 aa4.36□□□□□ -1.71
RTN4IP1-203ENST00000498091 RPGRQ92834 1020 aaKnown RBP4.36□□□□□ -1.71
RTN4IP1-203ENST00000498091 RBM17Q96I25 401 aaKnown RBP4.36□□□□□ -1.71
RTN4IP1-203ENST00000498091 SCYL1Q96KG9 808 aa4.36□□□□□ -1.71
RTN4IP1-203ENST00000498091 DSCC1Q9BVC3 393 aa4.36□□□□□ -1.71
RTN4IP1-203ENST00000498091 FAM126AQ9BYI3 521 aaPredicted RBP4.36□□□□□ -1.71
RTN4IP1-203ENST00000498091 CYP4F12Q9HCS2 524 aa4.36□□□□□ -1.71
RTN4IP1-203ENST00000498091 STK32BQ9NY57 414 aa4.36□□□□□ -1.71
RTN4IP1-203ENST00000498091 REV1Q9UBZ9 1251 aa4.36□□□□□ -1.71
RTN4IP1-203ENST00000498091 PCDHB10Q9UN67 800 aa4.36□□□□□ -1.71
RTN4IP1-203ENST00000498091 MINPP1Q9UNW1 487 aa4.36□□□□□ -1.71
RTN4IP1-203ENST00000498091 XDHP47989 1333 aa4.36□□□□□ -1.71
RTN4IP1-203ENST00000498091 LTBP3Q9NS15 1303 aa4.36□□□□□ -1.71
RTN4IP1-203ENST00000498091 TAF1P21675 1872 aa4.36□□□□□ -1.71
RTN4IP1-203ENST00000498091 TIAM2Q8IVF5 1701 aa4.35□□□□□ -1.71
RTN4IP1-203ENST00000498091 CCDC88AQ3V6T2 1871 aa4.35□□□□□ -1.71
RTN4IP1-203ENST00000498091 CCDC163A0A0D9SF12 145 aa4.35□□□□□ -1.71
RTN4IP1-203ENST00000498091 IQCA1LA6NCM1 817 aa4.35□□□□□ -1.71
RTN4IP1-203ENST00000498091 FAM86C2PA6NEL3 165 aa4.35□□□□□ -1.71
RTN4IP1-203ENST00000498091 SLC22A31A6NKX4 558 aa4.35□□□□□ -1.71
RTN4IP1-203ENST00000498091 GFRA2O00451 464 aa4.35□□□□□ -1.71
RTN4IP1-203ENST00000498091 WDHD1O75717 1129 aaPredicted RBP4.35□□□□□ -1.71
RTN4IP1-203ENST00000498091 F13BP05160 661 aa4.35□□□□□ -1.71
RTN4IP1-203ENST00000498091 ACRP10323 421 aa4.35□□□□□ -1.71
RTN4IP1-203ENST00000498091 NPR1P16066 1061 aa4.35□□□□□ -1.71
RTN4IP1-203ENST00000498091 ITGB5P18084 799 aa4.35□□□□□ -1.71
RTN4IP1-203ENST00000498091 STAT3P40763 770 aa4.35□□□□□ -1.71
RTN4IP1-203ENST00000498091 PHKA1P46020 1223 aa4.35□□□□□ -1.71
RTN4IP1-203ENST00000498091 NT5C2P49902 561 aa4.35□□□□□ -1.71
RTN4IP1-203ENST00000498091 EXOSC10Q01780 885 aaKnown RBP4.35□□□□□ -1.71
RTN4IP1-203ENST00000498091 PABPC4Q13310 644 aaKnown RBP eCLIP4.35□□□□□ -1.715e-8■■□□□ 13.9
RTN4IP1-203ENST00000498091 INPP5AQ14642 412 aa4.35□□□□□ -1.71
RTN4IP1-203ENST00000498091 CBX2Q14781 532 aaPredicted RBP4.35□□□□□ -1.71
RTN4IP1-203ENST00000498091 NECTIN1Q15223 517 aa4.35□□□□□ -1.71
RTN4IP1-203ENST00000498091 SLC10A6Q3KNW5 377 aa4.35□□□□□ -1.71
RTN4IP1-203ENST00000498091 SGO2Q562F6 1265 aa4.35□□□□□ -1.71
RTN4IP1-203ENST00000498091 BRDTQ58F21 947 aaPredicted RBP4.35□□□□□ -1.71
RTN4IP1-203ENST00000498091 ZC3H12BQ5HYM0 836 aaKnown RBP4.35□□□□□ -1.71
RTN4IP1-203ENST00000498091 CBLL1Q75N03 491 aa4.35□□□□□ -1.71
RTN4IP1-203ENST00000498091 NLRC3Q7RTR2 1065 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms