RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 POTEB3A0JP26 581 aa13.38□□□□□ -0.27
NUDCD3-211ENST00000497978 BACH1O14867 736 aa13.38□□□□□ -0.27
NUDCD3-211ENST00000497978 ATG7O95352 703 aa13.38□□□□□ -0.27
NUDCD3-211ENST00000497978 CPA1P15085 419 aa13.38□□□□□ -0.27
NUDCD3-211ENST00000497978 GNA11P29992 359 aa13.38□□□□□ -0.27
NUDCD3-211ENST00000497978 ITGB3BPQ13352 177 aaPredicted RBP13.38□□□□□ -0.27
NUDCD3-211ENST00000497978 GPM6BQ13491 265 aa13.38□□□□□ -0.27
NUDCD3-211ENST00000497978 PLCB4Q15147 1175 aa13.38□□□□□ -0.27
NUDCD3-211ENST00000497978 FBXO47Q5MNV8 452 aa13.38□□□□□ -0.27
NUDCD3-211ENST00000497978 POTEBQ6S5H4 581 aa13.38□□□□□ -0.27
NUDCD3-211ENST00000497978 PLA2G4DQ86XP0 818 aa13.38□□□□□ -0.27
NUDCD3-211ENST00000497978 FIBCD1Q8N539 461 aa13.38□□□□□ -0.27
NUDCD3-211ENST00000497978 MRPL38Q96DV4 380 aaKnown RBP13.38□□□□□ -0.27
NUDCD3-211ENST00000497978 NECAB3Q96P71 396 aaPredicted RBP13.38□□□□□ -0.27
NUDCD3-211ENST00000497978 ZMYND12Q9H0C1 365 aa13.38□□□□□ -0.27
NUDCD3-211ENST00000497978 RWDD3Q9Y3V2 267 aa13.38□□□□□ -0.27
NUDCD3-211ENST00000497978 PCDHA2Q9Y5H9 948 aa13.38□□□□□ -0.27
NUDCD3-211ENST00000497978 SNX14Q9Y5W7 946 aa13.38□□□□□ -0.27
NUDCD3-211ENST00000497978 SQORQ9Y6N5 450 aa13.38□□□□□ -0.27
NUDCD3-211ENST00000497978 VCANP13611 3396 aa13.38□□□□□ -0.27
NUDCD3-211ENST00000497978 COL4A6Q14031 1691 aa13.37□□□□□ -0.27
NUDCD3-211ENST00000497978 H3BNC9 293 aa13.37□□□□□ -0.27
NUDCD3-211ENST00000497978 DDX39AO00148 427 aaKnown RBP13.37□□□□□ -0.27
NUDCD3-211ENST00000497978 ENPP3O14638 875 aa13.37□□□□□ -0.27
NUDCD3-211ENST00000497978 PRPF3O43395 683 aaKnown RBP13.37□□□□□ -0.27
NUDCD3-211ENST00000497978 CYP3A4P08684 503 aa13.37□□□□□ -0.27
NUDCD3-211ENST00000497978 TIGD5Q53EQ6 642 aa13.37□□□□□ -0.27
NUDCD3-211ENST00000497978 MIS18BP1Q6P0N0 1132 aa13.37□□□□□ -0.27
NUDCD3-211ENST00000497978 REXO1Q8N1G1 1221 aaKnown RBP13.37□□□□□ -0.27
NUDCD3-211ENST00000497978 NME8Q8N427 588 aa13.37□□□□□ -0.27
NUDCD3-211ENST00000497978 FBXL16Q8N461 479 aa13.37□□□□□ -0.27
NUDCD3-211ENST00000497978 BICD2Q8TD16 824 aa13.37□□□□□ -0.27
NUDCD3-211ENST00000497978 FTHL17Q9BXU8 183 aa13.37□□□□□ -0.27
NUDCD3-211ENST00000497978 TCEAL9Q9UHQ7 104 aa13.37□□□□□ -0.27
NUDCD3-211ENST00000497978 PCDHB8Q9UN66 801 aa13.37□□□□□ -0.27
NUDCD3-211ENST00000497978 PCDHB13Q9Y5F0 798 aa13.37□□□□□ -0.27
NUDCD3-211ENST00000497978 TRPV2Q9Y5S1 764 aa13.37□□□□□ -0.27
NUDCD3-211ENST00000497978 NID2Q14112 1375 aa13.36□□□□□ -0.27
NUDCD3-211ENST00000497978 SMIM35A0A1B0GVV1 85 aa13.36□□□□□ -0.27
NUDCD3-211ENST00000497978 FAM86B1E9PN63 330 aa13.36□□□□□ -0.27
NUDCD3-211ENST00000497978 IPO5O00410 1097 aaKnown RBP13.36□□□□□ -0.27
NUDCD3-211ENST00000497978 HBP1O60381 514 aa13.36□□□□□ -0.27
NUDCD3-211ENST00000497978 FAM86B2P0C5J1 330 aa13.36□□□□□ -0.27
NUDCD3-211ENST00000497978 RPS6KB1P23443 525 aa13.36□□□□□ -0.27
NUDCD3-211ENST00000497978 CD52P31358 61 aa13.36□□□□□ -0.27
NUDCD3-211ENST00000497978 CTNNB1P35222 781 aa13.36□□□□□ -0.27
NUDCD3-211ENST00000497978 SETQ01105 290 aaPredicted RBP13.36□□□□□ -0.27
NUDCD3-211ENST00000497978 MTHFD1LQ6UB35 978 aa13.36□□□□□ -0.27
NUDCD3-211ENST00000497978 ABHD15Q6UXT9 468 aa13.36□□□□□ -0.27
NUDCD3-211ENST00000497978 CCDC148Q8NFR7 591 aa13.36□□□□□ -0.27
NUDCD3-211ENST00000497978 TRAPPC12Q8WVT3 735 aa13.36□□□□□ -0.27
NUDCD3-211ENST00000497978 ZBTB10Q96DT7 871 aa13.36□□□□□ -0.27
NUDCD3-211ENST00000497978 ZNF577Q9BSK1 485 aa13.36□□□□□ -0.27
NUDCD3-211ENST00000497978 CELF4Q9BZC1 486 aaKnown RBP13.36□□□□□ -0.27
NUDCD3-211ENST00000497978 UBE2ZQ9H832 354 aaPredicted RBP13.36□□□□□ -0.27
NUDCD3-211ENST00000497978 ZNF302Q9NR11 478 aa13.36□□□□□ -0.27
NUDCD3-211ENST00000497978 TBC1D22BQ9NU19 505 aa13.36□□□□□ -0.27
NUDCD3-211ENST00000497978 ADGRA3Q8IWK6 1321 aa13.36□□□□□ -0.27
NUDCD3-211ENST00000497978 IGKV6D-21A0A0A0MT36 114 aa13.35□□□□□ -0.27
NUDCD3-211ENST00000497978 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.35□□□□□ -0.27
NUDCD3-211ENST00000497978 C19orf67A6NJJ6 358 aa13.35□□□□□ -0.27
NUDCD3-211ENST00000497978 CCNE2O96020 404 aa13.35□□□□□ -0.27
NUDCD3-211ENST00000497978 RB1P06400 928 aa13.35□□□□□ -0.27
NUDCD3-211ENST00000497978 KLRC1P26715 233 aa13.35□□□□□ -0.27
NUDCD3-211ENST00000497978 KRT76Q01546 638 aa13.35□□□□□ -0.27
NUDCD3-211ENST00000497978 TMEM62Q0P6H9 643 aa13.35□□□□□ -0.27
NUDCD3-211ENST00000497978 PAK2Q13177 524 aa13.35□□□□□ -0.27
NUDCD3-211ENST00000497978 BTG3Q14201 252 aaPredicted RBP13.35□□□□□ -0.27
NUDCD3-211ENST00000497978 PKN1Q16512 942 aa13.35□□□□□ -0.27
NUDCD3-211ENST00000497978 PDXDC2PQ6P474 469 aa13.35□□□□□ -0.27
NUDCD3-211ENST00000497978 FAM43BQ6ZT52 329 aaPredicted RBP13.35□□□□□ -0.27
NUDCD3-211ENST00000497978 CKAP2LQ8IYA6 745 aa13.35□□□□□ -0.27
NUDCD3-211ENST00000497978 ZNF579Q8NAF0 562 aaKnown RBP13.35□□□□□ -0.27
NUDCD3-211ENST00000497978 BANK1Q8NDB2 785 aa13.35□□□□□ -0.27
NUDCD3-211ENST00000497978 ATP8B4Q8TF62 1192 aa13.35□□□□□ -0.27
NUDCD3-211ENST00000497978 KIF12Q96FN5 646 aa13.35□□□□□ -0.27
NUDCD3-211ENST00000497978 C11orf84Q9BUA3 381 aaPredicted RBP13.35□□□□□ -0.27
NUDCD3-211ENST00000497978 RNF26Q9BY78 433 aaPredicted RBP13.35□□□□□ -0.27
NUDCD3-211ENST00000497978 AGO3Q9H9G7 860 aaKnown RBP13.35□□□□□ -0.27
NUDCD3-211ENST00000497978 RALGAPA2Q2PPJ7 1873 aa13.35□□□□□ -0.27
NUDCD3-211ENST00000497978 NLRC5Q86WI3 1866 aa13.35□□□□□ -0.27
NUDCD3-211ENST00000497978 IGSF9BQ9UPX0 1349 aa13.35□□□□□ -0.27
NUDCD3-211ENST00000497978 COL1A2P08123 1366 aa13.34□□□□□ -0.27
NUDCD3-211ENST00000497978 TRANK1O15050 2925 aa13.34□□□□□ -0.27
NUDCD3-211ENST00000497978 IGLV3-22A0A075B6J6 115 aa13.34□□□□□ -0.27
NUDCD3-211ENST00000497978 DHX15O43143 795 aaKnown RBP13.34□□□□□ -0.27
NUDCD3-211ENST00000497978 MAP3K13O43283 966 aa13.34□□□□□ -0.27
NUDCD3-211ENST00000497978 STAG3L1P0CL83 205 aa13.34□□□□□ -0.27
NUDCD3-211ENST00000497978 KCNA5P22460 613 aa13.34□□□□□ -0.27
NUDCD3-211ENST00000497978 BMPR1AP36894 532 aa13.34□□□□□ -0.27
NUDCD3-211ENST00000497978 LEXMQ3ZCV2 418 aa13.34□□□□□ -0.27
NUDCD3-211ENST00000497978 ZNF484Q5JVG2 852 aa13.34□□□□□ -0.27
NUDCD3-211ENST00000497978 ODR4Q5SWX8 454 aa13.34□□□□□ -0.27
NUDCD3-211ENST00000497978 ZNF746Q6NUN9 644 aaPredicted RBP13.34□□□□□ -0.27
NUDCD3-211ENST00000497978 SWSAP1Q6NVH7 229 aa13.34□□□□□ -0.27
NUDCD3-211ENST00000497978 CCDC60Q8IWA6 550 aaPredicted RBP13.34□□□□□ -0.27
NUDCD3-211ENST00000497978 SMAP1Q8IYB5 467 aaPredicted RBP13.34□□□□□ -0.27
NUDCD3-211ENST00000497978 CRYGNQ8WXF5 182 aa13.34□□□□□ -0.27
NUDCD3-211ENST00000497978 PHKBQ93100 1093 aa13.34□□□□□ -0.27
NUDCD3-211ENST00000497978 PHF12Q96QT6 1004 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms