RNA–Protein interactions for RNA: ENST00000497758.1

MRPL55-234, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-234ENST00000497758 KIF28PB7ZC32 967 aa13.21□□□□□ -0.29
MRPL55-234ENST00000497758 RPLP2P05387 115 aaKnown RBP13.21□□□□□ -0.29
MRPL55-234ENST00000497758 CTSHP09668 335 aa13.21□□□□□ -0.29
MRPL55-234ENST00000497758 RSPH10BP0C881 870 aa13.21□□□□□ -0.29
MRPL55-234ENST00000497758 U2AF2P26368 475 aaKnown RBP eCLIP13.21□□□□□ -0.292e-8■□□□□ 10
MRPL55-234ENST00000497758 TRAPPC10P48553 1259 aa13.21□□□□□ -0.29
MRPL55-234ENST00000497758 ADAM17P78536 824 aa13.21□□□□□ -0.29
MRPL55-234ENST00000497758 PRKCEQ02156 737 aa13.21□□□□□ -0.29
MRPL55-234ENST00000497758 LRIT3Q3SXY7 679 aa13.21□□□□□ -0.29
MRPL55-234ENST00000497758 ZNF484Q5JVG2 852 aa13.21□□□□□ -0.29
MRPL55-234ENST00000497758 TTC38Q5R3I4 469 aa13.21□□□□□ -0.29
MRPL55-234ENST00000497758 LARP1BQ659C4 914 aaKnown RBP13.21□□□□□ -0.29
MRPL55-234ENST00000497758 NCAPH2Q6IBW4 605 aa13.21□□□□□ -0.29
MRPL55-234ENST00000497758 RUFY4Q6ZNE9 571 aa13.21□□□□□ -0.29
MRPL55-234ENST00000497758 C16orf59Q7L2K0 433 aa13.21□□□□□ -0.29
MRPL55-234ENST00000497758 HSCBQ8IWL3 235 aa13.21□□□□□ -0.29
MRPL55-234ENST00000497758 TRAPPC12Q8WVT3 735 aa13.21□□□□□ -0.29
MRPL55-234ENST00000497758 HAS1Q92839 578 aa13.21□□□□□ -0.29
MRPL55-234ENST00000497758 FAM49AQ9H0Q0 323 aaPredicted RBP13.21□□□□□ -0.29
MRPL55-234ENST00000497758 NRBP2Q9NSY0 501 aa13.21□□□□□ -0.29
MRPL55-234ENST00000497758 VAV3Q9UKW4 847 aa13.21□□□□□ -0.29
MRPL55-234ENST00000497758 CEP131Q9UPN4 1083 aa13.21□□□□□ -0.29
MRPL55-234ENST00000497758 KAT6AQ92794 2004 aa13.21□□□□□ -0.29
MRPL55-234ENST00000497758 COL1A2P08123 1366 aa13.2□□□□□ -0.3
MRPL55-234ENST00000497758 TRIP12Q14669 1992 aaPredicted RBP13.2□□□□□ -0.3
MRPL55-234ENST00000497758 ZBBXA8MT70 800 aa13.2□□□□□ -0.3
MRPL55-234ENST00000497758 DKC1O60832 514 aaKnown RBP eCLIP13.2□□□□□ -0.3
MRPL55-234ENST00000497758 OATP04181 439 aa13.2□□□□□ -0.3
MRPL55-234ENST00000497758 PDCP20941 246 aa13.2□□□□□ -0.3
MRPL55-234ENST00000497758 TXKP42681 527 aa13.2□□□□□ -0.3
MRPL55-234ENST00000497758 FXR1P51114 621 aaKnown RBP eCLIP13.2□□□□□ -0.3
MRPL55-234ENST00000497758 ORC2Q13416 577 aaPredicted RBP13.2□□□□□ -0.3
MRPL55-234ENST00000497758 ZNF174Q15697 407 aa13.2□□□□□ -0.3
MRPL55-234ENST00000497758 UGCGQ16739 394 aa13.2□□□□□ -0.3
MRPL55-234ENST00000497758 MARCH8Q5T0T0 291 aa13.2□□□□□ -0.3
MRPL55-234ENST00000497758 OTOP2Q7RTS6 562 aa13.2□□□□□ -0.3
MRPL55-234ENST00000497758 BANK1Q8NDB2 785 aa13.2□□□□□ -0.3
MRPL55-234ENST00000497758 HERVK_113Q902F9 699 aa13.2□□□□□ -0.3
MRPL55-234ENST00000497758 PCDHA12Q9UN75 941 aa13.2□□□□□ -0.3
MRPL55-234ENST00000497758 M0QZ92 97 aa13.19□□□□□ -0.3
MRPL55-234ENST00000497758 EML1O00423 815 aa13.19□□□□□ -0.3
MRPL55-234ENST00000497758 WNT7AO00755 349 aa13.19□□□□□ -0.3
MRPL55-234ENST00000497758 HSP90AA1P07900 732 aaKnown RBP13.19□□□□□ -0.3
MRPL55-234ENST00000497758 ATP4AP20648 1035 aa13.19□□□□□ -0.3
MRPL55-234ENST00000497758 KLRC1P26715 233 aa13.19□□□□□ -0.3
MRPL55-234ENST00000497758 PSMC5P62195 406 aa13.19□□□□□ -0.3
MRPL55-234ENST00000497758 MTHFD1LQ6UB35 978 aa13.19□□□□□ -0.3
MRPL55-234ENST00000497758 B3GNT9Q6UX72 402 aa13.19□□□□□ -0.3
MRPL55-234ENST00000497758 DNAJB3Q8WWF6 145 aa13.19□□□□□ -0.3
MRPL55-234ENST00000497758 SNX21Q969T3 373 aa13.19□□□□□ -0.3
MRPL55-234ENST00000497758 ZBTB10Q96DT7 871 aa13.19□□□□□ -0.3
MRPL55-234ENST00000497758 INTS4Q96HW7 963 aaKnown RBP13.19□□□□□ -0.3
MRPL55-234ENST00000497758 TTC12Q9H892 705 aaPredicted RBP13.19□□□□□ -0.3
MRPL55-234ENST00000497758 SEPT9Q9UHD8 586 aaPredicted RBP13.19□□□□□ -0.3
MRPL55-234ENST00000497758 PCDHA2Q9Y5H9 948 aa13.19□□□□□ -0.3
MRPL55-234ENST00000497758 TANC1Q9C0D5 1861 aa13.19□□□□□ -0.3
MRPL55-234ENST00000497758 VPS37CA5D8V6 355 aaPredicted RBP13.18□□□□□ -0.3
MRPL55-234ENST00000497758 ZNF862O60290 1169 aa13.18□□□□□ -0.3
MRPL55-234ENST00000497758 NBNO60934 754 aa13.18□□□□□ -0.3
MRPL55-234ENST00000497758 P4HBP07237 508 aaKnown RBP13.18□□□□□ -0.3
MRPL55-234ENST00000497758 OR52Z1P0C646 297 aa13.18□□□□□ -0.3
MRPL55-234ENST00000497758 QARSP47897 775 aaKnown RBP13.18□□□□□ -0.3
MRPL55-234ENST00000497758 EPHA7Q15375 998 aa13.18□□□□□ -0.3
MRPL55-234ENST00000497758 XKR3Q5GH77 459 aa13.18□□□□□ -0.3
MRPL55-234ENST00000497758 IER5Q5VY09 327 aa13.18□□□□□ -0.3
MRPL55-234ENST00000497758 TRAF7Q6Q0C0 670 aa13.18□□□□□ -0.3
MRPL55-234ENST00000497758 RPAINQ86UA6 219 aa13.18□□□□□ -0.3
MRPL55-234ENST00000497758 METTL13Q8N6R0 699 aa13.18□□□□□ -0.3
MRPL55-234ENST00000497758 MTMR9Q96QG7 549 aa13.18□□□□□ -0.3
MRPL55-234ENST00000497758 TMEM60Q9H2L4 133 aa13.18□□□□□ -0.3
MRPL55-234ENST00000497758 FOXD4L1Q9NU39 408 aa13.18□□□□□ -0.3
MRPL55-234ENST00000497758 SLC4A7Q9Y6M7 1214 aa13.18□□□□□ -0.3
MRPL55-234ENST00000497758 MYH9P35579 1960 aaKnown RBP13.18□□□□□ -0.3
MRPL55-234ENST00000497758 SMIM35A0A1B0GVV1 85 aa13.17□□□□□ -0.3
MRPL55-234ENST00000497758 DDX11L8A8MPP1 907 aa13.17□□□□□ -0.3
MRPL55-234ENST00000497758 ZBTB42B2RXF5 422 aa13.17□□□□□ -0.3
MRPL55-234ENST00000497758 SOX1O00570 391 aaPredicted RBP13.17□□□□□ -0.3
MRPL55-234ENST00000497758 MAGEB2O15479 319 aa13.17□□□□□ -0.3
MRPL55-234ENST00000497758 BAIAP3O94812 1187 aa13.17□□□□□ -0.3
MRPL55-234ENST00000497758 C22orf31O95567 290 aa13.17□□□□□ -0.3
MRPL55-234ENST00000497758 CXCL10P02778 98 aa13.17□□□□□ -0.3
MRPL55-234ENST00000497758 TMOD1P28289 359 aa13.17□□□□□ -0.3
MRPL55-234ENST00000497758 KCNJ6P48051 423 aa13.17□□□□□ -0.3
MRPL55-234ENST00000497758 MRPS6P82932 125 aaKnown RBP13.17□□□□□ -0.3
MRPL55-234ENST00000497758 SPIRE1Q08AE8 756 aa13.17□□□□□ -0.3
MRPL55-234ENST00000497758 TBC1D8BQ0IIM8 1120 aa13.17□□□□□ -0.3
MRPL55-234ENST00000497758 MBTPS1Q14703 1052 aa13.17□□□□□ -0.3
MRPL55-234ENST00000497758 TMEM266Q2M3C6 531 aa13.17□□□□□ -0.3
MRPL55-234ENST00000497758 RILPL1Q5EBL4 403 aa13.17□□□□□ -0.3
MRPL55-234ENST00000497758 FAM26DQ5JW98 314 aa13.17□□□□□ -0.3
MRPL55-234ENST00000497758 CNKSR3Q6P9H4 555 aa13.17□□□□□ -0.3
MRPL55-234ENST00000497758 NME8Q8N427 588 aa13.17□□□□□ -0.3
MRPL55-234ENST00000497758 SEPT8Q92599 483 aa13.17□□□□□ -0.3
MRPL55-234ENST00000497758 LRCH3Q96II8 777 aa13.17□□□□□ -0.3
MRPL55-234ENST00000497758 LXNQ9BS40 222 aa13.17□□□□□ -0.3
MRPL55-234ENST00000497758 CXXC1Q9P0U4 656 aaPredicted RBP13.17□□□□□ -0.3
MRPL55-234ENST00000497758 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.16□□□□□ -0.3
MRPL55-234ENST00000497758 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.16□□□□□ -0.3
MRPL55-234ENST00000497758 EFCAB14O75071 495 aa13.16□□□□□ -0.3
MRPL55-234ENST00000497758 CHRNA1P02708 482 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms