RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 ZNF215Q9UL58 517 aaPredicted RBP22.48■■□□□ 1.19
CTSD-206ENST00000497544 WDR81Q562E7 1941 aa22.47■■□□□ 1.19
CTSD-206ENST00000497544 H3BRB1 525 aa22.47■■□□□ 1.19
CTSD-206ENST00000497544 P4HBP07237 508 aaKnown RBP22.47■■□□□ 1.19
CTSD-206ENST00000497544 LONP1P36776 959 aaKnown RBP22.47■■□□□ 1.19
CTSD-206ENST00000497544 SMAD3P84022 425 aaKnown RBP22.47■■□□□ 1.19
CTSD-206ENST00000497544 PDXDC2PQ6P474 469 aa22.47■■□□□ 1.19
CTSD-206ENST00000497544 PLPPR4Q7Z2D5 763 aa22.47■■□□□ 1.19
CTSD-206ENST00000497544 CCDC60Q8IWA6 550 aaPredicted RBP22.47■■□□□ 1.19
CTSD-206ENST00000497544 TNPO1Q92973 898 aaKnown RBP22.47■■□□□ 1.19
CTSD-206ENST00000497544 AK8Q96MA6 479 aa22.47■■□□□ 1.19
CTSD-206ENST00000497544 PCYT2Q99447 389 aa22.47■■□□□ 1.19
CTSD-206ENST00000497544 C16orf70Q9BSU1 422 aa22.47■■□□□ 1.19
CTSD-206ENST00000497544 SENP6Q9GZR1 1112 aaPredicted RBP22.47■■□□□ 1.19
CTSD-206ENST00000497544 TUT1Q9H6E5 874 aaKnown RBP22.47■■□□□ 1.19
CTSD-206ENST00000497544 FBXO2Q9UK22 296 aaPredicted RBP22.47■■□□□ 1.19
CTSD-206ENST00000497544 EMSYQ7Z589 1322 aa22.47■■□□□ 1.19
CTSD-206ENST00000497544 KAT6AQ92794 2004 aa22.47■■□□□ 1.19
CTSD-206ENST00000497544 DKC1O60832 514 aaKnown RBP eCLIP22.46■■□□□ 1.191e-14■□□□□ 9.7
CTSD-206ENST00000497544 KRT79Q5XKE5 535 aa22.46■■□□□ 1.19
CTSD-206ENST00000497544 TRIM50Q86XT4 487 aa22.46■■□□□ 1.19
CTSD-206ENST00000497544 TPH2Q8IWU9 490 aa22.46■■□□□ 1.19
CTSD-206ENST00000497544 CKAP2LQ8IYA6 745 aa22.46■■□□□ 1.19
CTSD-206ENST00000497544 NEK9Q8TD19 979 aa22.46■■□□□ 1.19
CTSD-206ENST00000497544 AFAP1L1Q8TED9 768 aa22.46■■□□□ 1.19
CTSD-206ENST00000497544 LEO1Q8WVC0 666 aaPredicted RBP22.46■■□□□ 1.19
CTSD-206ENST00000497544 ATP6V0A1Q93050 837 aa22.46■■□□□ 1.19
CTSD-206ENST00000497544 DYDC2Q96IM9 177 aa22.46■■□□□ 1.19
CTSD-206ENST00000497544 STARD7Q9NQZ5 370 aa22.46■■□□□ 1.19
CTSD-206ENST00000497544 ERAP1Q9NZ08 941 aa22.46■■□□□ 1.19
CTSD-206ENST00000497544 RGL1Q9NZL6 768 aa22.46■■□□□ 1.19
CTSD-206ENST00000497544 QARSP47897 775 aaKnown RBP22.45■■□□□ 1.18
CTSD-206ENST00000497544 ME1P48163 572 aa22.45■■□□□ 1.18
CTSD-206ENST00000497544 PSEN2P49810 448 aa22.45■■□□□ 1.18
CTSD-206ENST00000497544 SLC26A2P50443 739 aa22.45■■□□□ 1.18
CTSD-206ENST00000497544 PSMC5P62195 406 aa22.45■■□□□ 1.18
CTSD-206ENST00000497544 GRIN1Q05586 938 aa22.45■■□□□ 1.18
CTSD-206ENST00000497544 MFSD10Q14728 455 aa22.45■■□□□ 1.18
CTSD-206ENST00000497544 KIAA0753Q2KHM9 967 aa22.45■■□□□ 1.18
CTSD-206ENST00000497544 HAUS3Q68CZ6 603 aa22.45■■□□□ 1.18
CTSD-206ENST00000497544 BANK1Q8NDB2 785 aa22.45■■□□□ 1.18
CTSD-206ENST00000497544 ADAMTS19Q8TE59 1207 aa22.45■■□□□ 1.18
CTSD-206ENST00000497544 KAT2BQ92831 832 aa22.45■■□□□ 1.18
CTSD-206ENST00000497544 CLIC6Q96NY7 704 aa22.45■■□□□ 1.18
CTSD-206ENST00000497544 CSRNP2Q9H175 543 aa22.45■■□□□ 1.18
CTSD-206ENST00000497544 MAFBQ9Y5Q3 323 aaPredicted RBP22.45■■□□□ 1.18
CTSD-206ENST00000497544 A0A1W2PQ45 241 aaPredicted RBP22.44■■□□□ 1.18
CTSD-206ENST00000497544 A0A1W2PQY0 241 aa22.44■■□□□ 1.18
CTSD-206ENST00000497544 CUTAO60888 179 aa22.44■■□□□ 1.18
CTSD-206ENST00000497544 F2P00734 622 aa22.44■■□□□ 1.18
CTSD-206ENST00000497544 MARK3P27448 753 aa22.44■■□□□ 1.18
CTSD-206ENST00000497544 CDC25AP30304 524 aa22.44■■□□□ 1.18
CTSD-206ENST00000497544 CCT6AP40227 531 aaKnown RBP22.44■■□□□ 1.18
CTSD-206ENST00000497544 UBA7P41226 1012 aa22.44■■□□□ 1.18
CTSD-206ENST00000497544 PSMC6P62333 389 aa22.44■■□□□ 1.18
CTSD-206ENST00000497544 CYP4A11Q02928 519 aa22.44■■□□□ 1.18
CTSD-206ENST00000497544 CTTNQ14247 550 aaKnown RBP22.44■■□□□ 1.18
CTSD-206ENST00000497544 TRMT1LQ7Z2T5 733 aaKnown RBP22.44■■□□□ 1.18
CTSD-206ENST00000497544 HSD17B14Q9BPX1 270 aa22.44■■□□□ 1.18
CTSD-206ENST00000497544 TUFT1Q9NNX1 390 aa22.44■■□□□ 1.18
CTSD-206ENST00000497544 SLITRK3O94933 977 aa22.43■■□□□ 1.18
CTSD-206ENST00000497544 SNX29Q8TEQ0 813 aa22.43■■□□□ 1.18
CTSD-206ENST00000497544 POLR3CQ9BUI4 534 aaPredicted RBP22.43■■□□□ 1.18
CTSD-206ENST00000497544 ZSWIM4Q9H7M6 989 aa22.43■■□□□ 1.18
CTSD-206ENST00000497544 GDPD2Q9HCC8 539 aa22.43■■□□□ 1.18
CTSD-206ENST00000497544 NRBP2Q9NSY0 501 aa22.43■■□□□ 1.18
CTSD-206ENST00000497544 PCDHA7Q9UN72 937 aa22.43■■□□□ 1.18
CTSD-206ENST00000497544 ARIH1Q9Y4X5 557 aaPredicted RBP22.43■■□□□ 1.18
CTSD-206ENST00000497544 PP2D1A8MPX8 630 aa22.42■■□□□ 1.18
CTSD-206ENST00000497544 HAS3O00219 553 aa22.42■■□□□ 1.18
CTSD-206ENST00000497544 RPA1P27694 616 aa22.42■■□□□ 1.18
CTSD-206ENST00000497544 ITGA7Q13683 1181 aa22.42■■□□□ 1.18
CTSD-206ENST00000497544 UGCGQ16739 394 aa22.42■■□□□ 1.18
CTSD-206ENST00000497544 CSPP1Q1MSJ5 1256 aa22.42■■□□□ 1.18
CTSD-206ENST00000497544 NBPF20Q3BBV1 942 aa22.42■■□□□ 1.18
CTSD-206ENST00000497544 SPECC1Q5M775 1068 aa22.42■■□□□ 1.18
CTSD-206ENST00000497544 CATSPER3Q86XQ3 398 aa22.42■■□□□ 1.18
CTSD-206ENST00000497544 ZNF579Q8NAF0 562 aaKnown RBP22.42■■□□□ 1.18
CTSD-206ENST00000497544 UHRF1Q96T88 793 aaPredicted RBP22.42■■□□□ 1.18
CTSD-206ENST00000497544 LXNQ9BS40 222 aa22.42■■□□□ 1.18
CTSD-206ENST00000497544 RNPEPQ9H4A4 650 aa22.42■■□□□ 1.18
CTSD-206ENST00000497544 TRPC6Q9Y210 931 aa22.42■■□□□ 1.18
CTSD-206ENST00000497544 SCN10AQ9Y5Y9 1956 aa22.41■■□□□ 1.18
CTSD-206ENST00000497544 IGSF9BQ9UPX0 1349 aa22.41■■□□□ 1.18
CTSD-206ENST00000497544 A0A0U1RQG5 324 aaPredicted RBP22.41■■□□□ 1.18
CTSD-206ENST00000497544 POTEB3A0JP26 581 aa22.41■■□□□ 1.18
CTSD-206ENST00000497544 DDX11L8A8MPP1 907 aa22.41■■□□□ 1.18
CTSD-206ENST00000497544 ZNF862O60290 1169 aa22.41■■□□□ 1.18
CTSD-206ENST00000497544 HBP1O60381 514 aa22.41■■□□□ 1.18
CTSD-206ENST00000497544 MED24O75448 989 aa22.41■■□□□ 1.18
CTSD-206ENST00000497544 SPATA31C1P0DKV0 1188 aa22.41■■□□□ 1.18
CTSD-206ENST00000497544 ATP4AP20648 1035 aa22.41■■□□□ 1.18
CTSD-206ENST00000497544 PLCB4Q15147 1175 aa22.41■■□□□ 1.18
CTSD-206ENST00000497544 ZRSR1Q15695 479 aaKnown RBP22.41■■□□□ 1.18
CTSD-206ENST00000497544 FAM47CQ5HY64 1035 aa22.41■■□□□ 1.18
CTSD-206ENST00000497544 POTEBQ6S5H4 581 aa22.41■■□□□ 1.18
CTSD-206ENST00000497544 CABP7Q86V35 215 aa22.41■■□□□ 1.18
CTSD-206ENST00000497544 C4orf19Q8IY42 314 aa22.41■■□□□ 1.18
CTSD-206ENST00000497544 C7orf31Q8N865 590 aa22.41■■□□□ 1.18
CTSD-206ENST00000497544 ATXN2LQ8WWM7 1075 aaKnown RBP22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 552.4 ms