RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 PDE6AP16499 860 aa5.06□□□□□ -1.6
VPS26A-208ENST00000497022 AMY2BP19961 511 aa5.06□□□□□ -1.6
VPS26A-208ENST00000497022 MCM7P33993 719 aa5.06□□□□□ -1.6
VPS26A-208ENST00000497022 SMAD2Q15796 467 aaKnown RBP5.06□□□□□ -1.6
VPS26A-208ENST00000497022 BTBD8Q5XKL5 378 aa5.06□□□□□ -1.6
VPS26A-208ENST00000497022 RALYLQ86SE5 291 aaKnown RBP5.06□□□□□ -1.6
VPS26A-208ENST00000497022 NLGN4XQ8N0W4 816 aa5.06□□□□□ -1.6
VPS26A-208ENST00000497022 SLC52A2Q9HAB3 445 aa5.06□□□□□ -1.6
VPS26A-208ENST00000497022 ARHGAP20Q9P2F6 1191 aa5.06□□□□□ -1.6
VPS26A-208ENST00000497022 CBLCQ9ULV8 474 aa5.06□□□□□ -1.6
VPS26A-208ENST00000497022 CCDC163A0A0D9SF12 145 aa5.05□□□□□ -1.6
VPS26A-208ENST00000497022 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.05□□□□□ -1.6
VPS26A-208ENST00000497022 FAM90A27PA6NNH2 459 aa5.05□□□□□ -1.6
VPS26A-208ENST00000497022 MAN2B1O00754 1011 aa5.05□□□□□ -1.6
VPS26A-208ENST00000497022 EFCAB14O75071 495 aa5.05□□□□□ -1.6
VPS26A-208ENST00000497022 KLHL18O94889 574 aa5.05□□□□□ -1.6
VPS26A-208ENST00000497022 FBXO21O94952 628 aa5.05□□□□□ -1.6
VPS26A-208ENST00000497022 KNG1P01042 644 aa5.05□□□□□ -1.6
VPS26A-208ENST00000497022 PTPN1P18031 435 aaKnown RBP5.05□□□□□ -1.6
VPS26A-208ENST00000497022 GLRBP48167 497 aa5.05□□□□□ -1.6
VPS26A-208ENST00000497022 JAM2P57087 298 aa5.05□□□□□ -1.6
VPS26A-208ENST00000497022 ST5P78524 1137 aa5.05□□□□□ -1.6
VPS26A-208ENST00000497022 DBPQ10586 325 aaPredicted RBP5.05□□□□□ -1.6
VPS26A-208ENST00000497022 CRY1Q16526 586 aa5.05□□□□□ -1.6
VPS26A-208ENST00000497022 FAM47CQ5HY64 1035 aa5.05□□□□□ -1.6
VPS26A-208ENST00000497022 ZC3H7AQ8IWR0 971 aaKnown RBP5.05□□□□□ -1.6
VPS26A-208ENST00000497022 STPG3Q8N7X2 389 aa5.05□□□□□ -1.6
VPS26A-208ENST00000497022 GSTCDQ8NEC7 633 aa5.05□□□□□ -1.6
VPS26A-208ENST00000497022 ZSWIM2Q8NEG5 633 aa5.05□□□□□ -1.6
VPS26A-208ENST00000497022 NUDT10Q8NFP7 164 aa5.05□□□□□ -1.6
VPS26A-208ENST00000497022 THAP3Q8WTV1 239 aaPredicted RBP5.05□□□□□ -1.6
VPS26A-208ENST00000497022 EDAQ92838 391 aa5.05□□□□□ -1.6
VPS26A-208ENST00000497022 NUDT11Q96G61 164 aa5.05□□□□□ -1.6
VPS26A-208ENST00000497022 DNAJC2Q99543 621 aaKnown RBP5.05□□□□□ -1.6
VPS26A-208ENST00000497022 TRIM8Q9BZR9 551 aa5.05□□□□□ -1.6
VPS26A-208ENST00000497022 KCND1Q9NSA2 647 aa5.05□□□□□ -1.6
VPS26A-208ENST00000497022 RIC8BQ9NVN3 520 aa5.05□□□□□ -1.6
VPS26A-208ENST00000497022 NDOR1Q9UHB4 597 aa5.05□□□□□ -1.6
VPS26A-208ENST00000497022 ZFP69BQ9UJL9 534 aa5.05□□□□□ -1.6
VPS26A-208ENST00000497022 ZDHHC9Q9Y397 364 aa5.05□□□□□ -1.6
VPS26A-208ENST00000497022 SLC4A7Q9Y6M7 1214 aa5.05□□□□□ -1.6
VPS26A-208ENST00000497022 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.04□□□□□ -1.6
VPS26A-208ENST00000497022 CCDC66A2RUB6 948 aa5.04□□□□□ -1.6
VPS26A-208ENST00000497022 ZNF561-AS1K7EIQ3 104 aa5.04□□□□□ -1.6
VPS26A-208ENST00000497022 FOXS1O43638 330 aa5.04□□□□□ -1.6
VPS26A-208ENST00000497022 NARSO43776 548 aaKnown RBP5.04□□□□□ -1.6
VPS26A-208ENST00000497022 IL18BPO95998 194 aa5.04□□□□□ -1.6
VPS26A-208ENST00000497022 KRT15P19012 456 aa5.04□□□□□ -1.6
VPS26A-208ENST00000497022 DNM2P50570 870 aa5.04□□□□□ -1.6
VPS26A-208ENST00000497022 INHBCP55103 352 aa5.04□□□□□ -1.6
VPS26A-208ENST00000497022 LACTBP83111 547 aaPredicted RBP5.04□□□□□ -1.6
VPS26A-208ENST00000497022 PTH1RQ03431 593 aa5.04□□□□□ -1.6
VPS26A-208ENST00000497022 NRN1LQ496H8 165 aa5.04□□□□□ -1.6
VPS26A-208ENST00000497022 TRIM61Q5EBN2 209 aa5.04□□□□□ -1.6
VPS26A-208ENST00000497022 TCTN3Q6NUS6 607 aa5.04□□□□□ -1.6
VPS26A-208ENST00000497022 EP400NLQ6ZTU2 488 aa5.04□□□□□ -1.6
VPS26A-208ENST00000497022 PTRH1Q86Y79 214 aaKnown RBP5.04□□□□□ -1.6
VPS26A-208ENST00000497022 LILRB2Q8N423 598 aa5.04□□□□□ -1.6
VPS26A-208ENST00000497022 SLC7A14Q8TBB6 771 aa5.04□□□□□ -1.6
VPS26A-208ENST00000497022 SREK1Q8WXA9 508 aaKnown RBP5.04□□□□□ -1.6
VPS26A-208ENST00000497022 MAGEB10Q96LZ2 347 aaPredicted RBP5.04□□□□□ -1.6
VPS26A-208ENST00000497022 ADOQ96SZ5 270 aa5.04□□□□□ -1.6
VPS26A-208ENST00000497022 IKZF4Q9H2S9 585 aa5.04□□□□□ -1.6
VPS26A-208ENST00000497022 SLC39A2Q9NP94 309 aa5.04□□□□□ -1.6
VPS26A-208ENST00000497022 ZFR2Q9UPR6 939 aaKnown RBP5.04□□□□□ -1.6
VPS26A-208ENST00000497022 ATP23Q9Y6H3 246 aa5.04□□□□□ -1.6
VPS26A-208ENST00000497022 NANOS3P60323 173 aaKnown RBP5.03□□□□□ -1.6
VPS26A-208ENST00000497022 C2orf27AQ580R0 203 aa5.03□□□□□ -1.6
VPS26A-208ENST00000497022 FIGNQ5HY92 759 aa5.03□□□□□ -1.6
VPS26A-208ENST00000497022 Q6ZUG5 572 aa5.03□□□□□ -1.6
VPS26A-208ENST00000497022 SCLYQ96I15 445 aa5.03□□□□□ -1.6
VPS26A-208ENST00000497022 LMF1Q96S06 567 aa5.03□□□□□ -1.6
VPS26A-208ENST00000497022 TACO1Q9BSH4 297 aaKnown RBP5.03□□□□□ -1.6
VPS26A-208ENST00000497022 OSBPL2Q9H1P3 480 aa5.03□□□□□ -1.6
VPS26A-208ENST00000497022 SMURF1Q9HCE7 757 aa5.03□□□□□ -1.6
VPS26A-208ENST00000497022 KCNK3O14649 394 aa5.02□□□□□ -1.61
VPS26A-208ENST00000497022 KCNQ2O43526 872 aa5.02□□□□□ -1.61
VPS26A-208ENST00000497022 CLASP2O75122 1294 aaKnown RBP5.02□□□□□ -1.61
VPS26A-208ENST00000497022 RASGRP1O95267 797 aa5.02□□□□□ -1.61
VPS26A-208ENST00000497022 C4BPAP04003 597 aaKnown RBP5.02□□□□□ -1.61
VPS26A-208ENST00000497022 COMTP21964 271 aa5.02□□□□□ -1.61
VPS26A-208ENST00000497022 GJA4P35212 333 aa5.02□□□□□ -1.61
VPS26A-208ENST00000497022 USP39Q53GS9 565 aaKnown RBP5.02□□□□□ -1.61
VPS26A-208ENST00000497022 IGFL4Q6B9Z1 124 aa5.02□□□□□ -1.61
VPS26A-208ENST00000497022 IFNL2Q8IZJ0 200 aa5.02□□□□□ -1.61
VPS26A-208ENST00000497022 AJUBAQ96IF1 538 aa5.02□□□□□ -1.61
VPS26A-208ENST00000497022 GNRHR2Q96P88 292 aa5.02□□□□□ -1.61
VPS26A-208ENST00000497022 MRPL4Q9BYD3 311 aaKnown RBP5.02□□□□□ -1.61
VPS26A-208ENST00000497022 CSRNP2Q9H175 543 aa5.02□□□□□ -1.61
VPS26A-208ENST00000497022 SFMBT1Q9UHJ3 866 aa5.02□□□□□ -1.61
VPS26A-208ENST00000497022 CDK11AQ9UQ88 783 aaPredicted RBP5.02□□□□□ -1.61
VPS26A-208ENST00000497022 PTCH2Q9Y6C5 1203 aa5.02□□□□□ -1.61
VPS26A-208ENST00000497022 PCSK5Q92824 1860 aa5.01□□□□□ -1.61
VPS26A-208ENST00000497022 A0A087X1B8 175 aa5.01□□□□□ -1.61
VPS26A-208ENST00000497022 H0Y858 1186 aa5.01□□□□□ -1.61
VPS26A-208ENST00000497022 PPFIA2O75334 1257 aa5.01□□□□□ -1.61
VPS26A-208ENST00000497022 APPP05067 770 aa5.01□□□□□ -1.61
VPS26A-208ENST00000497022 SEC23AQ15436 765 aa5.01□□□□□ -1.61
VPS26A-208ENST00000497022 NFE2L2Q16236 605 aa5.01□□□□□ -1.61
VPS26A-208ENST00000497022 LSM12Q3MHD2 195 aaKnown RBP5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms