RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 MYCLP1P12525 358 aaPredicted RBP4.63□□□□□ -1.67
EXOSC3-208ENST00000496910 PNLIPP16233 465 aa4.63□□□□□ -1.67
EXOSC3-208ENST00000496910 PRKCAP17252 672 aa4.63□□□□□ -1.67
EXOSC3-208ENST00000496910 CD53P19397 219 aa4.63□□□□□ -1.67
EXOSC3-208ENST00000496910 SDSP20132 328 aa4.63□□□□□ -1.67
EXOSC3-208ENST00000496910 FPR2P25090 351 aa4.63□□□□□ -1.67
EXOSC3-208ENST00000496910 BCL6P41182 706 aa4.63□□□□□ -1.67
EXOSC3-208ENST00000496910 AFMP43652 599 aa4.63□□□□□ -1.67
EXOSC3-208ENST00000496910 RAB27AP51159 221 aa4.63□□□□□ -1.67
EXOSC3-208ENST00000496910 HNRNPMP52272 730 aaKnown RBP eCLIP4.63□□□□□ -1.67
EXOSC3-208ENST00000496910 ERVFRD-1P60508 538 aa4.63□□□□□ -1.67
EXOSC3-208ENST00000496910 GPR85P60893 370 aa4.63□□□□□ -1.67
EXOSC3-208ENST00000496910 LMOD3Q0VAK6 560 aa4.63□□□□□ -1.67
EXOSC3-208ENST00000496910 ABHD17CQ6PCB6 329 aa4.63□□□□□ -1.67
EXOSC3-208ENST00000496910 BRAPQ7Z569 592 aa4.63□□□□□ -1.67
EXOSC3-208ENST00000496910 LURAP1LQ8IV03 231 aa4.63□□□□□ -1.67
EXOSC3-208ENST00000496910 AMOTL1Q8IY63 956 aa4.63□□□□□ -1.67
EXOSC3-208ENST00000496910 THEMISQ8N1K5 641 aaPredicted RBP4.63□□□□□ -1.67
EXOSC3-208ENST00000496910 MYO1HQ8N1T3 1032 aa4.63□□□□□ -1.67
EXOSC3-208ENST00000496910 SYNPOQ8N3V7 929 aa4.63□□□□□ -1.67
EXOSC3-208ENST00000496910 ABHD4Q8TB40 342 aa4.63□□□□□ -1.67
EXOSC3-208ENST00000496910 MFSD3Q96ES6 412 aa4.63□□□□□ -1.67
EXOSC3-208ENST00000496910 KIRREL1Q96J84 757 aa4.63□□□□□ -1.67
EXOSC3-208ENST00000496910 ASPSCR1Q9BZE9 553 aa4.63□□□□□ -1.67
EXOSC3-208ENST00000496910 ZNF700Q9H0M5 742 aa4.63□□□□□ -1.67
EXOSC3-208ENST00000496910 PDLIM7Q9NR12 457 aa4.63□□□□□ -1.67
EXOSC3-208ENST00000496910 MAP3K20Q9NYL2 800 aaKnown RBP4.63□□□□□ -1.67
EXOSC3-208ENST00000496910 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.63□□□□□ -1.67
EXOSC3-208ENST00000496910 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.63□□□□□ -1.67
EXOSC3-208ENST00000496910 RWDD3Q9Y3V2 267 aa4.63□□□□□ -1.67
EXOSC3-208ENST00000496910 TIMM13Q9Y5L4 95 aaPredicted RBP4.63□□□□□ -1.67
EXOSC3-208ENST00000496910 TAF6LQ9Y6J9 622 aa4.63□□□□□ -1.67
EXOSC3-208ENST00000496910 TMEM131LA2VDJ0 1609 aa4.63□□□□□ -1.67
EXOSC3-208ENST00000496910 KDM5AP29375 1690 aaKnown RBP4.63□□□□□ -1.67
EXOSC3-208ENST00000496910 DISP1Q96F81 1524 aa4.62□□□□□ -1.67
EXOSC3-208ENST00000496910 DIP2CQ9Y2E4 1556 aa4.62□□□□□ -1.67
EXOSC3-208ENST00000496910 CFAP69A5D8W1 941 aa4.62□□□□□ -1.67
EXOSC3-208ENST00000496910 IRS4O14654 1257 aaPredicted RBP4.62□□□□□ -1.67
EXOSC3-208ENST00000496910 SRGAP3O43295 1099 aa4.62□□□□□ -1.67
EXOSC3-208ENST00000496910 AKAP10O43572 662 aa4.62□□□□□ -1.67
EXOSC3-208ENST00000496910 NPHS1O60500 1241 aa4.62□□□□□ -1.67
EXOSC3-208ENST00000496910 KATNA1O75449 491 aa4.62□□□□□ -1.67
EXOSC3-208ENST00000496910 PTMSP20962 102 aa4.62□□□□□ -1.67
EXOSC3-208ENST00000496910 NFKB2Q00653 900 aa4.62□□□□□ -1.67
EXOSC3-208ENST00000496910 POU5F1BQ06416 359 aa4.62□□□□□ -1.67
EXOSC3-208ENST00000496910 PABPC4Q13310 644 aaKnown RBP eCLIP4.62□□□□□ -1.67
EXOSC3-208ENST00000496910 ZRSR2Q15696 482 aaKnown RBP4.62□□□□□ -1.67
EXOSC3-208ENST00000496910 KSR2Q6VAB6 950 aa4.62□□□□□ -1.67
EXOSC3-208ENST00000496910 NBPF11Q86T75 865 aa4.62□□□□□ -1.67
EXOSC3-208ENST00000496910 RNF180Q86T96 592 aa4.62□□□□□ -1.67
EXOSC3-208ENST00000496910 ZSWIM9Q86XI8 627 aa4.62□□□□□ -1.67
EXOSC3-208ENST00000496910 NIM1KQ8IY84 436 aa4.62□□□□□ -1.67
EXOSC3-208ENST00000496910 NUP43Q8NFH3 380 aa4.62□□□□□ -1.67
EXOSC3-208ENST00000496910 SVIPQ8NHG7 77 aa4.62□□□□□ -1.67
EXOSC3-208ENST00000496910 PCDH19Q8TAB3 1148 aa4.62□□□□□ -1.67
EXOSC3-208ENST00000496910 PCGF6Q9BYE7 350 aa4.62□□□□□ -1.67
EXOSC3-208ENST00000496910 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.62□□□□□ -1.67
EXOSC3-208ENST00000496910 CAAP1Q9H8G2 361 aa4.62□□□□□ -1.67
EXOSC3-208ENST00000496910 CASS4Q9NQ75 786 aa4.62□□□□□ -1.67
EXOSC3-208ENST00000496910 ZIM2Q9NZV7 527 aa4.62□□□□□ -1.67
EXOSC3-208ENST00000496910 SWAP70Q9UH65 585 aa4.62□□□□□ -1.67
EXOSC3-208ENST00000496910 GPR160Q9UJ42 338 aa4.62□□□□□ -1.67
EXOSC3-208ENST00000496910 INTUQ9ULD6 942 aa4.62□□□□□ -1.67
EXOSC3-208ENST00000496910 PCDHA2Q9Y5H9 948 aa4.62□□□□□ -1.67
EXOSC3-208ENST00000496910 ABCA3Q99758 1704 aa4.62□□□□□ -1.67
EXOSC3-208ENST00000496910 PTCH1Q13635 1447 aa4.62□□□□□ -1.67
EXOSC3-208ENST00000496910 TULP4Q9NRJ4 1543 aa4.62□□□□□ -1.67
EXOSC3-208ENST00000496910 MAST4O15021 2626 aa4.61□□□□□ -1.67
EXOSC3-208ENST00000496910 CLTCQ00610 1675 aaKnown RBP4.61□□□□□ -1.67
EXOSC3-208ENST00000496910 ZNF318Q5VUA4 2279 aa4.61□□□□□ -1.67
EXOSC3-208ENST00000496910 TCRBV16S1A1N1A0A5B0 115 aa4.61□□□□□ -1.67
EXOSC3-208ENST00000496910 H7BY64 318 aa4.61□□□□□ -1.67
EXOSC3-208ENST00000496910 EXOC5O00471 708 aa4.61□□□□□ -1.67
EXOSC3-208ENST00000496910 CRTAMO95727 393 aa4.61□□□□□ -1.67
EXOSC3-208ENST00000496910 CKMP06732 381 aa4.61□□□□□ -1.67
EXOSC3-208ENST00000496910 GLI1P08151 1106 aa4.61□□□□□ -1.67
EXOSC3-208ENST00000496910 DBHP09172 617 aa4.61□□□□□ -1.67
EXOSC3-208ENST00000496910 RAC2P15153 192 aa4.61□□□□□ -1.67
EXOSC3-208ENST00000496910 TACR1P25103 407 aa4.61□□□□□ -1.67
EXOSC3-208ENST00000496910 GUCY2FP51841 1108 aa4.61□□□□□ -1.67
EXOSC3-208ENST00000496910 RPL11P62913 178 aaKnown RBP4.61□□□□□ -1.67
EXOSC3-208ENST00000496910 LSAMPQ13449 338 aa4.61□□□□□ -1.67
EXOSC3-208ENST00000496910 ACAP1Q15027 740 aa4.61□□□□□ -1.67
EXOSC3-208ENST00000496910 SLC14A2Q15849 920 aa4.61□□□□□ -1.67
EXOSC3-208ENST00000496910 WDR78Q5VTH9 848 aa4.61□□□□□ -1.67
EXOSC3-208ENST00000496910 PCGF5Q86SE9 256 aa4.61□□□□□ -1.67
EXOSC3-208ENST00000496910 RIOX2Q8IUF8 465 aa4.61□□□□□ -1.67
EXOSC3-208ENST00000496910 CHPFQ8IZ52 775 aa4.61□□□□□ -1.67
EXOSC3-208ENST00000496910 IFNL3Q8IZI9 196 aa4.61□□□□□ -1.67
EXOSC3-208ENST00000496910 SMC1BQ8NDV3 1235 aa4.61□□□□□ -1.67
EXOSC3-208ENST00000496910 PPM1EQ8WY54 764 aa4.61□□□□□ -1.67
EXOSC3-208ENST00000496910 NINJ1Q92982 152 aa4.61□□□□□ -1.67
EXOSC3-208ENST00000496910 SYTL4Q96C24 671 aaPredicted RBP4.61□□□□□ -1.67
EXOSC3-208ENST00000496910 INTS4Q96HW7 963 aaKnown RBP4.61□□□□□ -1.67
EXOSC3-208ENST00000496910 NAP1L4Q99733 375 aaKnown RBP4.61□□□□□ -1.67
EXOSC3-208ENST00000496910 MTFR1LQ9H019 292 aa4.61□□□□□ -1.67
EXOSC3-208ENST00000496910 TMX4Q9H1E5 349 aaPredicted RBP4.61□□□□□ -1.67
EXOSC3-208ENST00000496910 MARCH2Q9P0N8 246 aa4.61□□□□□ -1.67
EXOSC3-208ENST00000496910 NDOR1Q9UHB4 597 aa4.61□□□□□ -1.67
EXOSC3-208ENST00000496910 NRBP1Q9UHY1 535 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms