RNA–Protein interactions for RNA: ENST00000496514.5

PDE6B-212, Transcript of phosphodiesterase 6B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDE6B, Length 3,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-212ENST00000496514 TRIM49CP0CI26 452 aa13.54□□□□□ -0.24
PDE6B-212ENST00000496514 HDLBPQ00341 1268 aaKnown RBP13.54□□□□□ -0.24
PDE6B-212ENST00000496514 PSMD2Q13200 908 aa13.54□□□□□ -0.24
PDE6B-212ENST00000496514 SKIDA1Q1XH10 827 aa13.54□□□□□ -0.24
PDE6B-212ENST00000496514 SFMBT2Q5VUG0 894 aa13.54□□□□□ -0.24
PDE6B-212ENST00000496514 HGSNATQ68CP4 663 aa13.54□□□□□ -0.24
PDE6B-212ENST00000496514 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.54□□□□□ -0.24
PDE6B-212ENST00000496514 RETREG2Q8NC44 543 aa13.54□□□□□ -0.24
PDE6B-212ENST00000496514 ZNF577Q9BSK1 485 aa13.54□□□□□ -0.24
PDE6B-212ENST00000496514 WDR11Q9BZH6 1224 aa13.54□□□□□ -0.24
PDE6B-212ENST00000496514 LRRC27Q9C0I9 530 aa13.54□□□□□ -0.24
PDE6B-212ENST00000496514 PCIF1Q9H4Z3 704 aa13.54□□□□□ -0.24
PDE6B-212ENST00000496514 WNT10BO00744 389 aa13.54□□□□□ -0.24
PDE6B-212ENST00000496514 FAM13AO94988 1023 aa13.54□□□□□ -0.24
PDE6B-212ENST00000496514 WHAMMP3Q1A5X7 153 aa13.54□□□□□ -0.24
PDE6B-212ENST00000496514 RINT1Q6NUQ1 792 aa13.54□□□□□ -0.24
PDE6B-212ENST00000496514 TRIM59Q8IWR1 403 aa13.54□□□□□ -0.24
PDE6B-212ENST00000496514 SYT2Q8N9I0 419 aaPredicted RBP13.54□□□□□ -0.24
PDE6B-212ENST00000496514 CCDC102AQ96A19 550 aa13.54□□□□□ -0.24
PDE6B-212ENST00000496514 FAM84AQ96KN4 292 aa13.54□□□□□ -0.24
PDE6B-212ENST00000496514 CCPG1Q9ULG6 757 aa13.54□□□□□ -0.24
PDE6B-212ENST00000496514 TMX2Q9Y320 296 aa13.54□□□□□ -0.24
PDE6B-212ENST00000496514 GJA3Q9Y6H8 435 aa13.54□□□□□ -0.24
PDE6B-212ENST00000496514 CYP3A7-CYP3A51PA0A087WV96 503 aa13.54□□□□□ -0.24
PDE6B-212ENST00000496514 RBAK-RBAKDNI3L0D1 243 aa13.54□□□□□ -0.24
PDE6B-212ENST00000496514 EIF2AK2P19525 551 aaKnown RBP13.54□□□□□ -0.24
PDE6B-212ENST00000496514 CYP3A7P24462 503 aa13.54□□□□□ -0.24
PDE6B-212ENST00000496514 KNOP1Q1ED39 458 aaKnown RBP13.54□□□□□ -0.24
PDE6B-212ENST00000496514 BEND6Q5SZJ8 279 aaPredicted RBP13.54□□□□□ -0.24
PDE6B-212ENST00000496514 DLK2Q6UY11 383 aa13.54□□□□□ -0.24
PDE6B-212ENST00000496514 FAM151AQ8WW52 585 aa13.54□□□□□ -0.24
PDE6B-212ENST00000496514 HOOK2Q96ED9 719 aa13.54□□□□□ -0.24
PDE6B-212ENST00000496514 UNC45AQ9H3U1 944 aa13.54□□□□□ -0.24
PDE6B-212ENST00000496514 SH2D4AQ9H788 454 aa13.54□□□□□ -0.24
PDE6B-212ENST00000496514 GOPCQ9HD26 462 aa13.54□□□□□ -0.24
PDE6B-212ENST00000496514 FAM53CQ9NYF3 392 aa13.54□□□□□ -0.24
PDE6B-212ENST00000496514 PEX10O60683 326 aa13.53□□□□□ -0.24
PDE6B-212ENST00000496514 USO1O60763 962 aaKnown RBP13.53□□□□□ -0.24
PDE6B-212ENST00000496514 MYCLP12524 364 aaPredicted RBP13.53□□□□□ -0.24
PDE6B-212ENST00000496514 KLRC1P26715 233 aa13.53□□□□□ -0.24
PDE6B-212ENST00000496514 PPP1R2P41236 205 aa13.53□□□□□ -0.24
PDE6B-212ENST00000496514 KLHL30Q0D2K2 578 aa13.53□□□□□ -0.24
PDE6B-212ENST00000496514 RASA3Q14644 834 aa13.53□□□□□ -0.24
PDE6B-212ENST00000496514 HYIQ5T013 277 aa13.53□□□□□ -0.24
PDE6B-212ENST00000496514 OTOP1Q7RTM1 612 aa13.53□□□□□ -0.24
PDE6B-212ENST00000496514 WNK4Q96J92 1243 aa13.53□□□□□ -0.24
PDE6B-212ENST00000496514 SPAG5Q96R06 1193 aa13.53□□□□□ -0.24
PDE6B-212ENST00000496514 CAMKK2Q96RR4 588 aa13.53□□□□□ -0.24
PDE6B-212ENST00000496514 ARMCX3Q9UH62 379 aaPredicted RBP13.53□□□□□ -0.24
PDE6B-212ENST00000496514 LRRIQ3A6PVS8 624 aaPredicted RBP13.53□□□□□ -0.24
PDE6B-212ENST00000496514 Q4G0T1 1027 aa13.53□□□□□ -0.24
PDE6B-212ENST00000496514 CCDC170Q8IYT3 715 aa13.53□□□□□ -0.24
PDE6B-212ENST00000496514 ZSWIM2Q8NEG5 633 aa13.53□□□□□ -0.24
PDE6B-212ENST00000496514 HYOU1Q9Y4L1 999 aa13.53□□□□□ -0.24
PDE6B-212ENST00000496514 QSER1Q2KHR3 1735 aa13.53□□□□□ -0.24
PDE6B-212ENST00000496514 NR3C1P04150 777 aa13.52□□□□□ -0.24
PDE6B-212ENST00000496514 KCNA3P22001 575 aa13.52□□□□□ -0.24
PDE6B-212ENST00000496514 NIM1KQ8IY84 436 aa13.52□□□□□ -0.24
PDE6B-212ENST00000496514 VCPKMTQ9H867 229 aa13.52□□□□□ -0.24
PDE6B-212ENST00000496514 RGS17Q9UGC6 210 aaPredicted RBP13.52□□□□□ -0.24
PDE6B-212ENST00000496514 ASTN1O14525 1302 aa13.52□□□□□ -0.24
PDE6B-212ENST00000496514 A0A1W2PQJ5 194 aa13.52□□□□□ -0.24
PDE6B-212ENST00000496514 MUM1L1Q5H9M0 696 aa13.52□□□□□ -0.24
PDE6B-212ENST00000496514 MBOAT7Q96N66 472 aa13.52□□□□□ -0.24
PDE6B-212ENST00000496514 VPS18Q9P253 973 aa13.52□□□□□ -0.24
PDE6B-212ENST00000496514 GREB1LQ9C091 1923 aaPredicted RBP13.52□□□□□ -0.25
PDE6B-212ENST00000496514 ESYT3A0FGR9 886 aa13.52□□□□□ -0.25
PDE6B-212ENST00000496514 CCDC151A5D8V7 595 aa13.52□□□□□ -0.25
PDE6B-212ENST00000496514 ZSCAN5CA6NGD5 496 aaPredicted RBP13.52□□□□□ -0.25
PDE6B-212ENST00000496514 TACC1O75410 805 aa13.52□□□□□ -0.25
PDE6B-212ENST00000496514 CAP2P40123 477 aa13.52□□□□□ -0.25
PDE6B-212ENST00000496514 KIAA0753Q2KHM9 967 aa13.52□□□□□ -0.25
PDE6B-212ENST00000496514 SPDYE2Q495Y8 402 aa13.52□□□□□ -0.25
PDE6B-212ENST00000496514 SLC9C1Q4G0N8 1177 aa13.52□□□□□ -0.25
PDE6B-212ENST00000496514 NSMFQ6X4W1 530 aa13.52□□□□□ -0.25
PDE6B-212ENST00000496514 LXNQ9BS40 222 aa13.52□□□□□ -0.25
PDE6B-212ENST00000496514 MRIQ9BWK5 157 aa13.52□□□□□ -0.25
PDE6B-212ENST00000496514 MYO1AQ9UBC5 1043 aa13.52□□□□□ -0.25
PDE6B-212ENST00000496514 CHORDC1Q9UHD1 332 aaPredicted RBP13.52□□□□□ -0.25
PDE6B-212ENST00000496514 PALMO75781 387 aa13.51□□□□□ -0.25
PDE6B-212ENST00000496514 FOSP01100 380 aaPredicted RBP13.51□□□□□ -0.25
PDE6B-212ENST00000496514 ITGB5P18084 799 aa13.51□□□□□ -0.25
PDE6B-212ENST00000496514 SOX10P56693 466 aa13.51□□□□□ -0.25
PDE6B-212ENST00000496514 PTK2Q05397 1052 aa13.51□□□□□ -0.25
PDE6B-212ENST00000496514 CEP55Q53EZ4 464 aa13.51□□□□□ -0.25
PDE6B-212ENST00000496514 COBLL1Q53SF7 1204 aa13.51□□□□□ -0.25
PDE6B-212ENST00000496514 ODR4Q5SWX8 454 aa13.51□□□□□ -0.25
PDE6B-212ENST00000496514 LRRC1Q9BTT6 524 aa13.51□□□□□ -0.25
PDE6B-212ENST00000496514 GPRC5CQ9NQ84 441 aa13.51□□□□□ -0.25
PDE6B-212ENST00000496514 DMGDHQ9UI17 866 aaKnown RBP13.51□□□□□ -0.25
PDE6B-212ENST00000496514 HERC5Q9UII4 1024 aaKnown RBP13.51□□□□□ -0.25
PDE6B-212ENST00000496514 TELO2Q9Y4R8 837 aa13.51□□□□□ -0.25
PDE6B-212ENST00000496514 IPO5O00410 1097 aaKnown RBP13.51□□□□□ -0.25
PDE6B-212ENST00000496514 VIL1P09327 827 aaKnown RBP13.51□□□□□ -0.25
PDE6B-212ENST00000496514 XRCC5P13010 732 aaKnown RBP13.51□□□□□ -0.25
PDE6B-212ENST00000496514 ATRNL1Q5VV63 1379 aa13.51□□□□□ -0.25
PDE6B-212ENST00000496514 RBM46Q8TBY0 533 aaKnown RBP13.51□□□□□ -0.25
PDE6B-212ENST00000496514 GMLQ99445 158 aa13.51□□□□□ -0.25
PDE6B-212ENST00000496514 GLT8D2Q9H1C3 349 aa13.51□□□□□ -0.25
PDE6B-212ENST00000496514 SEPT11Q9NVA2 429 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms