RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 INSL6Q9Y581 213 aa16.24■□□□□ 0.19
VTI1A-209ENST00000496445 CDY2AQ9Y6F7 541 aa16.24■□□□□ 0.19
VTI1A-209ENST00000496445 EVPLQ92817 2033 aa16.24■□□□□ 0.19
VTI1A-209ENST00000496445 TTC3P53804 2025 aa16.23■□□□□ 0.19
VTI1A-209ENST00000496445 RRN3P2A6NIE6 340 aa16.23■□□□□ 0.19
VTI1A-209ENST00000496445 IPO5O00410 1097 aaKnown RBP16.23■□□□□ 0.19
VTI1A-209ENST00000496445 MRPS6P82932 125 aaKnown RBP16.23■□□□□ 0.19
VTI1A-209ENST00000496445 SETQ01105 290 aaPredicted RBP16.23■□□□□ 0.19
VTI1A-209ENST00000496445 RSPH3Q86UC2 560 aa16.23■□□□□ 0.19
VTI1A-209ENST00000496445 CCDC148Q8NFR7 591 aa16.23■□□□□ 0.19
VTI1A-209ENST00000496445 C17orf80Q9BSJ5 609 aa16.23■□□□□ 0.19
VTI1A-209ENST00000496445 SUGCTQ9HAC7 445 aa16.23■□□□□ 0.19
VTI1A-209ENST00000496445 CYP46A1Q9Y6A2 500 aa16.23■□□□□ 0.19
VTI1A-209ENST00000496445 BRWD1Q9NSI6 2320 aa16.23■□□□□ 0.19
VTI1A-209ENST00000496445 TCF20Q9UGU0 1960 aaKnown RBP16.22■□□□□ 0.19
VTI1A-209ENST00000496445 POTEB3A0JP26 581 aa16.22■□□□□ 0.19
VTI1A-209ENST00000496445 ATP4AP20648 1035 aa16.22■□□□□ 0.19
VTI1A-209ENST00000496445 CIITAP33076 1130 aa16.22■□□□□ 0.19
VTI1A-209ENST00000496445 TMEM62Q0P6H9 643 aa16.22■□□□□ 0.19
VTI1A-209ENST00000496445 MCTP2Q6DN12 878 aa16.22■□□□□ 0.19
VTI1A-209ENST00000496445 POTEBQ6S5H4 581 aa16.22■□□□□ 0.19
VTI1A-209ENST00000496445 BICD2Q8TD16 824 aa16.22■□□□□ 0.19
VTI1A-209ENST00000496445 LINC01599Q8WXQ3 324 aa16.22■□□□□ 0.19
VTI1A-209ENST00000496445 SYMPKQ92797 1274 aaKnown RBP16.22■□□□□ 0.19
VTI1A-209ENST00000496445 ASB2Q96Q27 587 aa16.22■□□□□ 0.19
VTI1A-209ENST00000496445 ZNF577Q9BSK1 485 aa16.22■□□□□ 0.19
VTI1A-209ENST00000496445 AGO3Q9H9G7 860 aaKnown RBP16.22■□□□□ 0.19
VTI1A-209ENST00000496445 RC3H2Q9HBD1 1191 aaKnown RBP16.22■□□□□ 0.19
VTI1A-209ENST00000496445 PCDHA2Q9Y5H9 948 aa16.22■□□□□ 0.19
VTI1A-209ENST00000496445 ZBTB42B2RXF5 422 aa16.21■□□□□ 0.19
VTI1A-209ENST00000496445 BACH1O14867 736 aa16.21■□□□□ 0.19
VTI1A-209ENST00000496445 UPP2O95045 317 aa16.21■□□□□ 0.19
VTI1A-209ENST00000496445 SLC26A2P50443 739 aa16.21■□□□□ 0.19
VTI1A-209ENST00000496445 MRPS5P82675 430 aaKnown RBP16.21■□□□□ 0.19
VTI1A-209ENST00000496445 TFF2Q03403 129 aa16.21■□□□□ 0.19
VTI1A-209ENST00000496445 PRR16Q569H4 304 aa16.21■□□□□ 0.19
VTI1A-209ENST00000496445 MTHFD1LQ6UB35 978 aa16.21■□□□□ 0.19
VTI1A-209ENST00000496445 TSHZ1Q6ZSZ6 1077 aa16.21■□□□□ 0.19
VTI1A-209ENST00000496445 ATP8B4Q8TF62 1192 aa16.21■□□□□ 0.19
VTI1A-209ENST00000496445 ZNF274Q96GC6 653 aaPredicted RBP16.21■□□□□ 0.19
VTI1A-209ENST00000496445 YME1L1Q96TA2 773 aa16.21■□□□□ 0.19
VTI1A-209ENST00000496445 ZNF302Q9NR11 478 aa16.21■□□□□ 0.19
VTI1A-209ENST00000496445 SH3GLB2Q9NR46 395 aa16.21■□□□□ 0.19
VTI1A-209ENST00000496445 PPP4R2Q9NY27 417 aa16.21■□□□□ 0.19
VTI1A-209ENST00000496445 TRPV2Q9Y5S1 764 aa16.21■□□□□ 0.19
VTI1A-209ENST00000496445 NCOR1O75376 2440 aa16.2■□□□□ 0.18
VTI1A-209ENST00000496445 SMIM35A0A1B0GVV1 85 aa16.2■□□□□ 0.18
VTI1A-209ENST00000496445 RPLP2P05387 115 aaKnown RBP16.2■□□□□ 0.18
VTI1A-209ENST00000496445 CD52P31358 61 aa16.2■□□□□ 0.18
VTI1A-209ENST00000496445 STK3Q13188 491 aa16.2■□□□□ 0.18
VTI1A-209ENST00000496445 NPY5RQ15761 445 aa16.2■□□□□ 0.18
VTI1A-209ENST00000496445 FAM160B1Q5W0V3 765 aa16.2■□□□□ 0.18
VTI1A-209ENST00000496445 ZNF746Q6NUN9 644 aaPredicted RBP16.2■□□□□ 0.18
VTI1A-209ENST00000496445 TBC1D22BQ9NU19 505 aa16.2■□□□□ 0.18
VTI1A-209ENST00000496445 PDRG1Q9NUG6 133 aa16.2■□□□□ 0.18
VTI1A-209ENST00000496445 COL1A2P08123 1366 aa16.2■□□□□ 0.18
VTI1A-209ENST00000496445 IGSF9BQ9UPX0 1349 aa16.19■□□□□ 0.18
VTI1A-209ENST00000496445 M0R2N6 131 aa16.19■□□□□ 0.18
VTI1A-209ENST00000496445 MSH4O15457 936 aa16.19■□□□□ 0.18
VTI1A-209ENST00000496445 HBP1O60381 514 aa16.19■□□□□ 0.18
VTI1A-209ENST00000496445 ABCB7O75027 752 aa16.19■□□□□ 0.18
VTI1A-209ENST00000496445 DEXIO95424 95 aa16.19■□□□□ 0.18
VTI1A-209ENST00000496445 LINC00271P0C7V0 271 aa16.19■□□□□ 0.18
VTI1A-209ENST00000496445 SSRP1Q08945 709 aaKnown RBP16.19■□□□□ 0.18
VTI1A-209ENST00000496445 SKIV2LQ15477 1246 aaKnown RBP16.19■□□□□ 0.18
VTI1A-209ENST00000496445 SWSAP1Q6NVH7 229 aa16.19■□□□□ 0.18
VTI1A-209ENST00000496445 MIS18BP1Q6P0N0 1132 aa16.19■□□□□ 0.18
VTI1A-209ENST00000496445 PDXDC2PQ6P474 469 aa16.19■□□□□ 0.18
VTI1A-209ENST00000496445 TRIM22Q8IYM9 498 aa16.19■□□□□ 0.18
VTI1A-209ENST00000496445 FBXO22Q8NEZ5 403 aa16.19■□□□□ 0.18
VTI1A-209ENST00000496445 TNPO1Q92973 898 aaKnown RBP16.19■□□□□ 0.18
VTI1A-209ENST00000496445 AIFM3Q96NN9 605 aa16.19■□□□□ 0.18
VTI1A-209ENST00000496445 TSPYL2Q9H2G4 693 aaPredicted RBP16.19■□□□□ 0.18
VTI1A-209ENST00000496445 LMCD1Q9NZU5 365 aa16.19■□□□□ 0.18
VTI1A-209ENST00000496445 KDM3AQ9Y4C1 1321 aa16.19■□□□□ 0.18
VTI1A-209ENST00000496445 ENPP3O14638 875 aa16.18■□□□□ 0.18
VTI1A-209ENST00000496445 CPLX1O14810 134 aa16.18■□□□□ 0.18
VTI1A-209ENST00000496445 C22orf31O95567 290 aa16.18■□□□□ 0.18
VTI1A-209ENST00000496445 KLRC1P26715 233 aa16.18■□□□□ 0.18
VTI1A-209ENST00000496445 NLRP5P59047 1200 aa16.18■□□□□ 0.18
VTI1A-209ENST00000496445 KRT76Q01546 638 aa16.18■□□□□ 0.18
VTI1A-209ENST00000496445 SCRN1Q12765 414 aa16.18■□□□□ 0.18
VTI1A-209ENST00000496445 EPC2Q52LR7 807 aa16.18■□□□□ 0.18
VTI1A-209ENST00000496445 IER5Q5VY09 327 aa16.18■□□□□ 0.18
VTI1A-209ENST00000496445 SMAP1Q8IYB5 467 aaPredicted RBP16.18■□□□□ 0.18
VTI1A-209ENST00000496445 ADAMTS19Q8TE59 1207 aa16.18■□□□□ 0.18
VTI1A-209ENST00000496445 TBCKQ8TEA7 893 aa16.18■□□□□ 0.18
VTI1A-209ENST00000496445 GJA10Q969M2 543 aa16.18■□□□□ 0.18
VTI1A-209ENST00000496445 PCDHA4Q9UN74 947 aa16.18■□□□□ 0.18
VTI1A-209ENST00000496445 MAFBQ9Y5Q3 323 aaPredicted RBP16.18■□□□□ 0.18
VTI1A-209ENST00000496445 SQORQ9Y6N5 450 aa16.18■□□□□ 0.18
VTI1A-209ENST00000496445 FNDC1Q4ZHG4 1894 aaPredicted RBP16.17■□□□□ 0.18
VTI1A-209ENST00000496445 KCNQ1P51787 676 aa16.17■□□□□ 0.18
VTI1A-209ENST00000496445 ZNF484Q5JVG2 852 aa16.17■□□□□ 0.18
VTI1A-209ENST00000496445 RTN4RL1Q86UN2 441 aaPredicted RBP16.17■□□□□ 0.18
VTI1A-209ENST00000496445 CRIPAKQ8N1N5 446 aa16.17■□□□□ 0.18
VTI1A-209ENST00000496445 DAGLBQ8NCG7 672 aa16.17■□□□□ 0.18
VTI1A-209ENST00000496445 SAMD11Q96NU1 681 aa16.17■□□□□ 0.18
VTI1A-209ENST00000496445 CELF4Q9BZC1 486 aaKnown RBP16.17■□□□□ 0.18
VTI1A-209ENST00000496445 TMX1Q9H3N1 280 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms