RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 EN1Q05925 392 aaPredicted RBP12.17□□□□□ -0.46
CMSS1-208ENST00000496116 CTTNQ14247 550 aaKnown RBP12.17□□□□□ -0.46
CMSS1-208ENST00000496116 STXBP4Q6ZWJ1 553 aa12.17□□□□□ -0.46
CMSS1-208ENST00000496116 CAMKK2Q96RR4 588 aa12.17□□□□□ -0.46
CMSS1-208ENST00000496116 ACBD3Q9H3P7 528 aa12.17□□□□□ -0.46
CMSS1-208ENST00000496116 MLXIPQ9HAP2 919 aa12.17□□□□□ -0.46
CMSS1-208ENST00000496116 PLCB1Q9NQ66 1216 aa12.17□□□□□ -0.46
CMSS1-208ENST00000496116 ZNF277Q9NRM2 450 aaPredicted RBP12.17□□□□□ -0.46
CMSS1-208ENST00000496116 KCND2Q9NZV8 630 aa12.17□□□□□ -0.46
CMSS1-208ENST00000496116 TSKSQ9UJT2 592 aa12.17□□□□□ -0.46
CMSS1-208ENST00000496116 ZBTB12Q9Y330 459 aaPredicted RBP12.17□□□□□ -0.46
CMSS1-208ENST00000496116 HYOU1Q9Y4L1 999 aa12.17□□□□□ -0.46
CMSS1-208ENST00000496116 RSPH10B2B2RC85 870 aa12.16□□□□□ -0.46
CMSS1-208ENST00000496116 CHMP2AO43633 222 aa12.16□□□□□ -0.46
CMSS1-208ENST00000496116 PPP1R12BO60237 982 aaPredicted RBP12.16□□□□□ -0.46
CMSS1-208ENST00000496116 NR3C1P04150 777 aa12.16□□□□□ -0.46
CMSS1-208ENST00000496116 ASNSP08243 561 aa12.16□□□□□ -0.46
CMSS1-208ENST00000496116 RSPH10BP0C881 870 aa12.16□□□□□ -0.46
CMSS1-208ENST00000496116 NAP1L1P55209 391 aaKnown RBP12.16□□□□□ -0.46
CMSS1-208ENST00000496116 ITIH3Q06033 890 aa12.16□□□□□ -0.46
CMSS1-208ENST00000496116 KLHL30Q0D2K2 578 aa12.16□□□□□ -0.46
CMSS1-208ENST00000496116 ZYXQ15942 572 aaKnown RBP12.16□□□□□ -0.46
CMSS1-208ENST00000496116 ASIC2Q16515 512 aa12.16□□□□□ -0.46
CMSS1-208ENST00000496116 SLC18A3Q16572 532 aa12.16□□□□□ -0.46
CMSS1-208ENST00000496116 NIM1KQ8IY84 436 aa12.16□□□□□ -0.46
CMSS1-208ENST00000496116 PIGOQ8TEQ8 1089 aa12.16□□□□□ -0.46
CMSS1-208ENST00000496116 TBC1D5Q92609 795 aa12.16□□□□□ -0.46
CMSS1-208ENST00000496116 DYDC2Q96IM9 177 aa12.16□□□□□ -0.46
CMSS1-208ENST00000496116 SPAG5Q96R06 1193 aa12.16□□□□□ -0.46
CMSS1-208ENST00000496116 NACC1Q96RE7 527 aa12.16□□□□□ -0.46
CMSS1-208ENST00000496116 ZNF577Q9BSK1 485 aa12.16□□□□□ -0.46
CMSS1-208ENST00000496116 TMEM39BQ9GZU3 492 aa12.16□□□□□ -0.46
CMSS1-208ENST00000496116 GANQ9H2C0 597 aa12.16□□□□□ -0.46
CMSS1-208ENST00000496116 PARVGQ9HBI0 331 aa12.16□□□□□ -0.46
CMSS1-208ENST00000496116 SEL1LQ9UBV2 794 aa12.16□□□□□ -0.46
CMSS1-208ENST00000496116 ZNRF3Q9ULT6 936 aa12.16□□□□□ -0.46
CMSS1-208ENST00000496116 BZW2Q9Y6E2 419 aaKnown RBP12.16□□□□□ -0.46
CMSS1-208ENST00000496116 MYH10P35580 1976 aa12.16□□□□□ -0.46
CMSS1-208ENST00000496116 SHTN1A0MZ66 631 aa12.16□□□□□ -0.46
CMSS1-208ENST00000496116 ZNF185O15231 689 aa12.16□□□□□ -0.46
CMSS1-208ENST00000496116 POLR3GO15318 223 aaPredicted RBP12.16□□□□□ -0.46
CMSS1-208ENST00000496116 TLR2O60603 784 aa12.16□□□□□ -0.46
CMSS1-208ENST00000496116 HOXD13P35453 343 aa12.16□□□□□ -0.46
CMSS1-208ENST00000496116 EXOC3L4Q17RC7 722 aa12.16□□□□□ -0.46
CMSS1-208ENST00000496116 DCAF17Q5H9S7 520 aaPredicted RBP12.16□□□□□ -0.46
CMSS1-208ENST00000496116 MIGA2Q7L4E1 593 aa12.16□□□□□ -0.46
CMSS1-208ENST00000496116 LDHDQ86WU2 507 aa12.16□□□□□ -0.46
CMSS1-208ENST00000496116 MYCT1Q8N699 235 aa12.16□□□□□ -0.46
CMSS1-208ENST00000496116 FAM133AQ8N9E0 248 aa12.16□□□□□ -0.46
CMSS1-208ENST00000496116 DRC1Q96MC2 740 aa12.16□□□□□ -0.46
CMSS1-208ENST00000496116 OSBPL9Q96SU4 736 aa12.16□□□□□ -0.46
CMSS1-208ENST00000496116 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.16□□□□□ -0.46
CMSS1-208ENST00000496116 TEKT3Q9BXF9 490 aa12.16□□□□□ -0.46
CMSS1-208ENST00000496116 ASTN1O14525 1302 aa12.15□□□□□ -0.46
CMSS1-208ENST00000496116 UBE4BO95155 1302 aa12.15□□□□□ -0.46
CMSS1-208ENST00000496116 LOXHD1Q8IVV2 1947 aa12.15□□□□□ -0.46
CMSS1-208ENST00000496116 AKAP3O75969 853 aa12.15□□□□□ -0.46
CMSS1-208ENST00000496116 UBXN2AP68543 259 aa12.15□□□□□ -0.46
CMSS1-208ENST00000496116 C10orf76Q5T2E6 689 aa12.15□□□□□ -0.46
CMSS1-208ENST00000496116 CCDC181Q5TID7 509 aa12.15□□□□□ -0.46
CMSS1-208ENST00000496116 TCERG1LQ5VWI1 586 aa12.15□□□□□ -0.46
CMSS1-208ENST00000496116 SAMD1Q6SPF0 538 aaPredicted RBP12.15□□□□□ -0.46
CMSS1-208ENST00000496116 C1orf186Q6ZWK4 172 aa12.15□□□□□ -0.46
CMSS1-208ENST00000496116 ZNF572Q7Z3I7 529 aaPredicted RBP12.15□□□□□ -0.46
CMSS1-208ENST00000496116 CREG2Q8IUH2 290 aa12.15□□□□□ -0.46
CMSS1-208ENST00000496116 GPIHBP1Q8IV16 184 aa12.15□□□□□ -0.46
CMSS1-208ENST00000496116 FBXL5Q9UKA1 691 aa12.15□□□□□ -0.46
CMSS1-208ENST00000496116 ODF2LQ9ULJ1 636 aa12.15□□□□□ -0.46
CMSS1-208ENST00000496116 FRMPD4Q14CM0 1322 aa12.15□□□□□ -0.46
CMSS1-208ENST00000496116 UCHL3P15374 230 aa12.14□□□□□ -0.47
CMSS1-208ENST00000496116 PAFAH1B1P43034 410 aa12.14□□□□□ -0.47
CMSS1-208ENST00000496116 ARID5AQ03989 594 aa12.14□□□□□ -0.47
CMSS1-208ENST00000496116 CASP8Q14790 479 aa12.14□□□□□ -0.47
CMSS1-208ENST00000496116 EPHA7Q15375 998 aa12.14□□□□□ -0.47
CMSS1-208ENST00000496116 NFIL3Q16649 462 aa12.14□□□□□ -0.47
CMSS1-208ENST00000496116 GBP6Q6ZN66 633 aa12.14□□□□□ -0.47
CMSS1-208ENST00000496116 NEK9Q8TD19 979 aa12.14□□□□□ -0.47
CMSS1-208ENST00000496116 RUBCNQ92622 972 aa12.14□□□□□ -0.47
CMSS1-208ENST00000496116 DEFB129Q9H1M3 183 aa12.14□□□□□ -0.47
CMSS1-208ENST00000496116 RNF216Q9NWF9 866 aaPredicted RBP12.14□□□□□ -0.47
CMSS1-208ENST00000496116 GTPBP10A4D1E9 387 aaKnown RBP12.14□□□□□ -0.47
CMSS1-208ENST00000496116 BUB1O43683 1085 aa12.14□□□□□ -0.47
CMSS1-208ENST00000496116 ICAM1P05362 532 aa12.14□□□□□ -0.47
CMSS1-208ENST00000496116 PSMC2P35998 433 aaKnown RBP12.14□□□□□ -0.47
CMSS1-208ENST00000496116 TNIP1Q15025 636 aa12.14□□□□□ -0.47
CMSS1-208ENST00000496116 KLHDC7AQ5VTJ3 777 aa12.14□□□□□ -0.47
CMSS1-208ENST00000496116 MMGT1Q8N4V1 131 aa12.14□□□□□ -0.47
CMSS1-208ENST00000496116 ANKRD13CQ8N6S4 541 aa12.14□□□□□ -0.47
CMSS1-208ENST00000496116 RIT2Q99578 217 aa12.14□□□□□ -0.47
CMSS1-208ENST00000496116 RNF14Q9UBS8 474 aa12.14□□□□□ -0.47
CMSS1-208ENST00000496116 ADAMTS1Q9UHI8 967 aa12.14□□□□□ -0.47
CMSS1-208ENST00000496116 CCPG1Q9ULG6 757 aa12.14□□□□□ -0.47
CMSS1-208ENST00000496116 RBBP6Q7Z6E9 1792 aaKnown RBP12.13□□□□□ -0.47
CMSS1-208ENST00000496116 SFI1A8K8P3 1242 aa12.13□□□□□ -0.47
CMSS1-208ENST00000496116 PDE2AO00408 941 aaPredicted RBP12.13□□□□□ -0.47
CMSS1-208ENST00000496116 IPO5O00410 1097 aaKnown RBP12.13□□□□□ -0.47
CMSS1-208ENST00000496116 CLIC2O15247 247 aa12.13□□□□□ -0.47
CMSS1-208ENST00000496116 SLC9A1P19634 815 aa12.13□□□□□ -0.47
CMSS1-208ENST00000496116 PON1P27169 355 aa12.13□□□□□ -0.47
CMSS1-208ENST00000496116 ANXA13P27216 316 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms