RNA–Protein interactions for RNA: ENST00000496030.1

APTX-233, Transcript of aprataxin, human

TSL 3

Gene APTX, Length 633 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-233	ENST00000496030	PSEN2	P49810	448 aa		13.41	□□□□□ -0.26
APTX-233	ENST00000496030	ITGA7	Q13683	1181 aa		13.41	□□□□□ -0.26
APTX-233	ENST00000496030	HIC1	Q14526	733 aa		13.41	□□□□□ -0.26
APTX-233	ENST00000496030	UTP14C	Q5TAP6	766 aa	Known RBP	13.41	□□□□□ -0.26
APTX-233	ENST00000496030	ALYREF	Q86V81	257 aa	Known RBP	13.41	□□□□□ -0.26
APTX-233	ENST00000496030	CCDC60	Q8IWA6	550 aa	Predicted RBP	13.41	□□□□□ -0.26
APTX-233	ENST00000496030	SLFN12	Q8IYM2	578 aa		13.41	□□□□□ -0.26
APTX-233	ENST00000496030	MICALL1	Q8N3F8	863 aa		13.41	□□□□□ -0.26
APTX-233	ENST00000496030	KHSRP	Q92945	711 aa	Known RBP eCLIP	13.41	□□□□□ -0.26
APTX-233	ENST00000496030	RNPEP	Q9H4A4	650 aa		13.41	□□□□□ -0.26
APTX-233	ENST00000496030	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	13.41	□□□□□ -0.26
APTX-233	ENST00000496030	TUT1	Q9H6E5	874 aa	Known RBP	13.41	□□□□□ -0.26
APTX-233	ENST00000496030	DISC1	Q9NRI5	854 aa		13.41	□□□□□ -0.26
APTX-233	ENST00000496030	YBX2	Q9Y2T7	364 aa	Known RBP	13.41	□□□□□ -0.26
APTX-233	ENST00000496030	RBM19	Q9Y4C8	960 aa	Known RBP	13.41	□□□□□ -0.26
APTX-233	ENST00000496030	PCDHA10	Q9Y5I2	948 aa		13.41	□□□□□ -0.26
APTX-233	ENST00000496030	EMSY	Q7Z589	1322 aa		13.4	□□□□□ -0.26
APTX-233	ENST00000496030	TRIP12	Q14669	1992 aa	Predicted RBP	13.4	□□□□□ -0.26
APTX-233	ENST00000496030		A0A0U1RQG5	324 aa	Predicted RBP	13.4	□□□□□ -0.26
APTX-233	ENST00000496030	WDR64	B1ANS9	1081 aa		13.4	□□□□□ -0.26
APTX-233	ENST00000496030	BAG4	O95429	457 aa	Known RBP	13.4	□□□□□ -0.26
APTX-233	ENST00000496030	OR52Z1	P0C646	297 aa		13.4	□□□□□ -0.26
APTX-233	ENST00000496030	CSF2RA	P15509	400 aa		13.4	□□□□□ -0.26
APTX-233	ENST00000496030	HOXC8	P31273	242 aa		13.4	□□□□□ -0.26
APTX-233	ENST00000496030	TXK	P42681	527 aa		13.4	□□□□□ -0.26
APTX-233	ENST00000496030	ATP2C1	P98194	919 aa	Predicted RBP	13.4	□□□□□ -0.26
APTX-233	ENST00000496030	MFSD10	Q14728	455 aa		13.4	□□□□□ -0.26
APTX-233	ENST00000496030	PTPA	Q15257	358 aa		13.4	□□□□□ -0.26
APTX-233	ENST00000496030	KIAA0753	Q2KHM9	967 aa		13.4	□□□□□ -0.26
APTX-233	ENST00000496030	FOXD4L5	Q5VV16	416 aa	Predicted RBP	13.4	□□□□□ -0.26
APTX-233	ENST00000496030	MFSD5	Q6N075	450 aa		13.4	□□□□□ -0.26
APTX-233	ENST00000496030	SWSAP1	Q6NVH7	229 aa		13.4	□□□□□ -0.26
APTX-233	ENST00000496030	ZNF365	Q70YC5	407 aa		13.4	□□□□□ -0.26
APTX-233	ENST00000496030	PLPPR4	Q7Z2D5	763 aa		13.4	□□□□□ -0.26
APTX-233	ENST00000496030	SESTD1	Q86VW0	696 aa		13.4	□□□□□ -0.26
APTX-233	ENST00000496030	SMAP1	Q8IYB5	467 aa	Predicted RBP	13.4	□□□□□ -0.26
APTX-233	ENST00000496030	AFAP1L1	Q8TED9	768 aa		13.4	□□□□□ -0.26
APTX-233	ENST00000496030	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	13.4	□□□□□ -0.26
APTX-233	ENST00000496030	VTI1A	Q96AJ9	217 aa		13.4	□□□□□ -0.26
APTX-233	ENST00000496030	TOX2	Q96NM4	488 aa		13.4	□□□□□ -0.26
APTX-233	ENST00000496030	CTAGE1	Q96RT6	745 aa		13.4	□□□□□ -0.26
APTX-233	ENST00000496030	FTO	Q9C0B1	505 aa	Known RBP eCLIP	13.4	□□□□□ -0.26
APTX-233	ENST00000496030	SMARCAD1	Q9H4L7	1026 aa		13.4	□□□□□ -0.26
APTX-233	ENST00000496030	TTC12	Q9H892	705 aa	Predicted RBP	13.4	□□□□□ -0.26
APTX-233	ENST00000496030	PCDHA12	Q9UN75	941 aa		13.4	□□□□□ -0.26
APTX-233	ENST00000496030	MAFB	Q9Y5Q3	323 aa	Predicted RBP	13.4	□□□□□ -0.26
APTX-233	ENST00000496030	CLIC4	Q9Y696	253 aa		13.4	□□□□□ -0.26
APTX-233	ENST00000496030	MYH9	P35579	1960 aa	Known RBP	13.4	□□□□□ -0.27
APTX-233	ENST00000496030	FAM86C2P	A6NEL3	165 aa		13.39	□□□□□ -0.27
APTX-233	ENST00000496030	DCDC2C	A8MYV0	355 aa		13.39	□□□□□ -0.27
APTX-233	ENST00000496030	CHMP2A	O43633	222 aa		13.39	□□□□□ -0.27
APTX-233	ENST00000496030	ZNF862	O60290	1169 aa		13.39	□□□□□ -0.27
APTX-233	ENST00000496030	STBD1	O95210	358 aa		13.39	□□□□□ -0.27
APTX-233	ENST00000496030	F13A1	P00488	732 aa		13.39	□□□□□ -0.27
APTX-233	ENST00000496030	PSAP	P07602	524 aa		13.39	□□□□□ -0.27
APTX-233	ENST00000496030	SFN	P31947	248 aa		13.39	□□□□□ -0.27
APTX-233	ENST00000496030	STAT5B	P51692	787 aa		13.39	□□□□□ -0.27
APTX-233	ENST00000496030	JAK3	P52333	1124 aa		13.39	□□□□□ -0.27
APTX-233	ENST00000496030	PPIG	Q13427	754 aa	Known RBP eCLIP	13.39	□□□□□ -0.27
APTX-233	ENST00000496030	UGCG	Q16739	394 aa		13.39	□□□□□ -0.27
APTX-233	ENST00000496030	TMEM31	Q5JXX7	168 aa		13.39	□□□□□ -0.27
APTX-233	ENST00000496030	MIS18BP1	Q6P0N0	1132 aa		13.39	□□□□□ -0.27
APTX-233	ENST00000496030	NFRKB	Q6P4R8	1299 aa		13.39	□□□□□ -0.27
APTX-233	ENST00000496030	MIER3	Q7Z3K6	550 aa		13.39	□□□□□ -0.27
APTX-233	ENST00000496030	RDM1	Q8NG50	284 aa		13.39	□□□□□ -0.27
APTX-233	ENST00000496030	HDAC6	Q9UBN7	1215 aa		13.39	□□□□□ -0.27
APTX-233	ENST00000496030	MARCH6	O60337	910 aa		13.38	□□□□□ -0.27
APTX-233	ENST00000496030	CD4	P01730	458 aa		13.38	□□□□□ -0.27
APTX-233	ENST00000496030	PRPH	P41219	470 aa		13.38	□□□□□ -0.27
APTX-233	ENST00000496030	FXR2	P51116	673 aa	Known RBP eCLIP	13.38	□□□□□ -0.27
APTX-233	ENST00000496030	ADAM17	P78536	824 aa		13.38	□□□□□ -0.27
APTX-233	ENST00000496030	PTPN11	Q06124	597 aa	Predicted RBP	13.38	□□□□□ -0.27
APTX-233	ENST00000496030	PLCB4	Q15147	1175 aa		13.38	□□□□□ -0.27
APTX-233	ENST00000496030	EPHA7	Q15375	998 aa		13.38	□□□□□ -0.27
APTX-233	ENST00000496030	SF3A1	Q15459	793 aa	Known RBP	13.38	□□□□□ -0.27
APTX-233	ENST00000496030	FAM126B	Q8IXS8	530 aa		13.38	□□□□□ -0.27
APTX-233	ENST00000496030	GLG1	Q92896	1179 aa		13.38	□□□□□ -0.27
APTX-233	ENST00000496030	USP28	Q96RU2	1077 aa		13.38	□□□□□ -0.27
APTX-233	ENST00000496030	HSD17B14	Q9BPX1	270 aa		13.38	□□□□□ -0.27
APTX-233	ENST00000496030	SEZ6L	Q9BYH1	1024 aa		13.38	□□□□□ -0.27
APTX-233	ENST00000496030	TRPV6	Q9H1D0	765 aa		13.38	□□□□□ -0.27
APTX-233	ENST00000496030	ZNF302	Q9NR11	478 aa		13.38	□□□□□ -0.27
APTX-233	ENST00000496030	ERAP1	Q9NZ08	941 aa		13.38	□□□□□ -0.27
APTX-233	ENST00000496030	WRAP73	Q9P2S5	460 aa	Predicted RBP	13.38	□□□□□ -0.27
APTX-233	ENST00000496030	GABBR1	Q9UBS5	961 aa		13.38	□□□□□ -0.27
APTX-233	ENST00000496030	MSRA	Q9UJ68	235 aa		13.38	□□□□□ -0.27
APTX-233	ENST00000496030	MYH15	Q9Y2K3	1946 aa		13.38	□□□□□ -0.27
APTX-233	ENST00000496030	IGSF9B	Q9UPX0	1349 aa		13.38	□□□□□ -0.27
APTX-233	ENST00000496030	POTEM	A6NI47	508 aa		13.37	□□□□□ -0.27
APTX-233	ENST00000496030	ZBTB42	B2RXF5	422 aa		13.37	□□□□□ -0.27
APTX-233	ENST00000496030	LAD1	O00515	517 aa		13.37	□□□□□ -0.27
APTX-233	ENST00000496030	BACH1	O14867	736 aa		13.37	□□□□□ -0.27
APTX-233	ENST00000496030	SLITRK3	O94933	977 aa		13.37	□□□□□ -0.27
APTX-233	ENST00000496030	SMIM10L2A	P0DMW4	78 aa		13.37	□□□□□ -0.27
APTX-233	ENST00000496030	SMIM10L2B	P0DMW5	78 aa		13.37	□□□□□ -0.27
APTX-233	ENST00000496030	MARK3	P27448	753 aa		13.37	□□□□□ -0.27
APTX-233	ENST00000496030	ANP32A	P39687	249 aa	Known RBP	13.37	□□□□□ -0.27
APTX-233	ENST00000496030	TEC	P42680	631 aa		13.37	□□□□□ -0.27
APTX-233	ENST00000496030	CHMP4BP1	P59074	171 aa		13.37	□□□□□ -0.27
APTX-233	ENST00000496030	ZNF200	P98182	395 aa	Predicted RBP	13.37	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms