RNA–Protein interactions for RNA: ENST00000494913.5

COL20A1-207, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 2

Gene COL20A1, Length 1,497 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-207ENST00000494913 ZBED2Q9BTP6 218 aa20.36■□□□□ 0.85
COL20A1-207ENST00000494913 FAM49AQ9H0Q0 323 aaPredicted RBP20.36■□□□□ 0.85
COL20A1-207ENST00000494913 A0A0C4DFX4 3053 aa20.35■□□□□ 0.85
COL20A1-207ENST00000494913 CCDC194A0A1B0GVG4 234 aa20.35■□□□□ 0.85
COL20A1-207ENST00000494913 TLL1O43897 1013 aa20.35■□□□□ 0.85
COL20A1-207ENST00000494913 HBP1O60381 514 aa20.35■□□□□ 0.85
COL20A1-207ENST00000494913 GAS7O60861 476 aa20.35■□□□□ 0.85
COL20A1-207ENST00000494913 TRMT1LQ7Z2T5 733 aaKnown RBP20.35■□□□□ 0.85
COL20A1-207ENST00000494913 CKAP2LQ8IYA6 745 aa20.35■□□□□ 0.85
COL20A1-207ENST00000494913 SLC17A8Q8NDX2 589 aa20.35■□□□□ 0.85
COL20A1-207ENST00000494913 NSUN7Q8NE18 718 aaKnown RBP20.35■□□□□ 0.85
COL20A1-207ENST00000494913 OXER1Q8TDS5 423 aa20.35■□□□□ 0.85
COL20A1-207ENST00000494913 SLC5A5Q92911 643 aa20.35■□□□□ 0.85
COL20A1-207ENST00000494913 ATP4AP20648 1035 aa20.34■□□□□ 0.85
COL20A1-207ENST00000494913 LRCH2Q5VUJ6 765 aa20.34■□□□□ 0.85
COL20A1-207ENST00000494913 MTHFD1LQ6UB35 978 aa20.34■□□□□ 0.85
COL20A1-207ENST00000494913 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.34■□□□□ 0.85
COL20A1-207ENST00000494913 MAFAQ8NHW3 353 aaPredicted RBP20.34■□□□□ 0.85
COL20A1-207ENST00000494913 DISC1Q9NRI5 854 aa20.34■□□□□ 0.85
COL20A1-207ENST00000494913 GABBR1Q9UBS5 961 aa20.34■□□□□ 0.85
COL20A1-207ENST00000494913 LIMCH1Q9UPQ0 1083 aa20.34■□□□□ 0.85
COL20A1-207ENST00000494913 PCDHA2Q9Y5H9 948 aa20.34■□□□□ 0.85
COL20A1-207ENST00000494913 MAFBQ9Y5Q3 323 aaPredicted RBP20.34■□□□□ 0.85
COL20A1-207ENST00000494913 WDR64B1ANS9 1081 aa20.33■□□□□ 0.85
COL20A1-207ENST00000494913 CHMP2AO43633 222 aa20.33■□□□□ 0.85
COL20A1-207ENST00000494913 JAK2O60674 1132 aa20.33■□□□□ 0.85
COL20A1-207ENST00000494913 GHRP10912 638 aa20.33■□□□□ 0.85
COL20A1-207ENST00000494913 KLRC1P26715 233 aa20.33■□□□□ 0.85
COL20A1-207ENST00000494913 MGAT3Q09327 533 aa20.33■□□□□ 0.85
COL20A1-207ENST00000494913 LETM2Q2VYF4 491 aa20.33■□□□□ 0.85
COL20A1-207ENST00000494913 FAM117BQ6P1L5 589 aa20.33■□□□□ 0.85
COL20A1-207ENST00000494913 MOXD1Q6UVY6 613 aa20.33■□□□□ 0.85
COL20A1-207ENST00000494913 PIK3AP1Q6ZUJ8 805 aa20.33■□□□□ 0.85
COL20A1-207ENST00000494913 GAS2L1Q99501 681 aaPredicted RBP20.33■□□□□ 0.85
COL20A1-207ENST00000494913 TEKT3Q9BXF9 490 aa20.33■□□□□ 0.85
COL20A1-207ENST00000494913 IFIH1Q9BYX4 1025 aaKnown RBP20.33■□□□□ 0.85
COL20A1-207ENST00000494913 DDX25Q9UHL0 483 aaKnown RBP20.33■□□□□ 0.85
COL20A1-207ENST00000494913 GTF3C3Q9Y5Q9 886 aa20.33■□□□□ 0.85
COL20A1-207ENST00000494913 CDY2AQ9Y6F7 541 aa20.33■□□□□ 0.85
COL20A1-207ENST00000494913 PRUNE2Q8WUY3 3088 aa20.33■□□□□ 0.84
COL20A1-207ENST00000494913 PSMD10O75832 226 aa20.32■□□□□ 0.84
COL20A1-207ENST00000494913 RPLP2P05387 115 aaKnown RBP20.32■□□□□ 0.84
COL20A1-207ENST00000494913 MRPS6P82932 125 aaKnown RBP20.32■□□□□ 0.84
COL20A1-207ENST00000494913 ZNF484Q5JVG2 852 aa20.32■□□□□ 0.84
COL20A1-207ENST00000494913 IER5Q5VY09 327 aa20.32■□□□□ 0.84
COL20A1-207ENST00000494913 MBOAT7Q96N66 472 aa20.32■□□□□ 0.84
COL20A1-207ENST00000494913 KIF2CQ99661 725 aa20.32■□□□□ 0.84
COL20A1-207ENST00000494913 UNC45AQ9H3U1 944 aa20.32■□□□□ 0.84
COL20A1-207ENST00000494913 SMIM35A0A1B0GVV1 85 aa20.31■□□□□ 0.84
COL20A1-207ENST00000494913 GJB5O95377 273 aa20.31■□□□□ 0.84
COL20A1-207ENST00000494913 AMHP03971 560 aa20.31■□□□□ 0.84
COL20A1-207ENST00000494913 TMEM62Q0P6H9 643 aa20.31■□□□□ 0.84
COL20A1-207ENST00000494913 MKRN4PQ13434 485 aaPredicted RBP20.31■□□□□ 0.84
COL20A1-207ENST00000494913 LPIN1Q14693 890 aa20.31■□□□□ 0.84
COL20A1-207ENST00000494913 NEK8Q86SG6 692 aa20.31■□□□□ 0.84
COL20A1-207ENST00000494913 MYOCDQ8IZQ8 938 aa20.31■□□□□ 0.84
COL20A1-207ENST00000494913 BBXQ8WY36 941 aaPredicted RBP20.31■□□□□ 0.84
COL20A1-207ENST00000494913 APBB2Q92870 758 aa20.31■□□□□ 0.84
COL20A1-207ENST00000494913 CERS4Q9HA82 394 aa20.31■□□□□ 0.84
COL20A1-207ENST00000494913 PTPRSQ13332 1948 aa20.31■□□□□ 0.84
COL20A1-207ENST00000494913 ZBTB42B2RXF5 422 aa20.3■□□□□ 0.84
COL20A1-207ENST00000494913 SLC37A4O43826 429 aa20.3■□□□□ 0.84
COL20A1-207ENST00000494913 ARHGEF15O94989 841 aa20.3■□□□□ 0.84
COL20A1-207ENST00000494913 SFNP31947 248 aa20.3■□□□□ 0.84
COL20A1-207ENST00000494913 KRT2P35908 639 aa20.3■□□□□ 0.84
COL20A1-207ENST00000494913 JAK3P52333 1124 aa20.3■□□□□ 0.84
COL20A1-207ENST00000494913 FOSBP53539 338 aa20.3■□□□□ 0.84
COL20A1-207ENST00000494913 TAP1Q03518 808 aa20.3■□□□□ 0.84
COL20A1-207ENST00000494913 ST3GAL1Q11201 340 aa20.3■□□□□ 0.84
COL20A1-207ENST00000494913 FBXO47Q5MNV8 452 aa20.3■□□□□ 0.84
COL20A1-207ENST00000494913 ETNPPLQ8TBG4 499 aa20.3■□□□□ 0.84
COL20A1-207ENST00000494913 RAD9AQ99638 391 aa20.3■□□□□ 0.84
COL20A1-207ENST00000494913 BRMS1Q9HCU9 246 aa20.3■□□□□ 0.84
COL20A1-207ENST00000494913 COL1A2P08123 1366 aa20.3■□□□□ 0.84
COL20A1-207ENST00000494913 MYH9P35579 1960 aaKnown RBP20.3■□□□□ 0.84
COL20A1-207ENST00000494913 LCHNA4D1U4 455 aa20.3■□□□□ 0.84
COL20A1-207ENST00000494913 M0QZ92 97 aa20.3■□□□□ 0.84
COL20A1-207ENST00000494913 IGFBP4P22692 258 aa20.3■□□□□ 0.84
COL20A1-207ENST00000494913 NR5A1Q13285 461 aa20.3■□□□□ 0.84
COL20A1-207ENST00000494913 ADGRE1Q14246 886 aa20.3■□□□□ 0.84
COL20A1-207ENST00000494913 EARS2Q5JPH6 523 aaKnown RBP20.3■□□□□ 0.84
COL20A1-207ENST00000494913 MIER3Q7Z3K6 550 aa20.3■□□□□ 0.84
COL20A1-207ENST00000494913 CCDC83Q8IWF9 413 aa20.3■□□□□ 0.84
COL20A1-207ENST00000494913 NME8Q8N427 588 aa20.3■□□□□ 0.84
COL20A1-207ENST00000494913 UNC80Q8N2C7 3258 aa20.29■□□□□ 0.84
COL20A1-207ENST00000494913 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.29■□□□□ 0.84
COL20A1-207ENST00000494913 CCNT1O60563 726 aaKnown RBP20.29■□□□□ 0.84
COL20A1-207ENST00000494913 TRIM29Q14134 588 aa20.29■□□□□ 0.84
COL20A1-207ENST00000494913 PPP4R3AQ6IN85 833 aa20.29■□□□□ 0.84
COL20A1-207ENST00000494913 KIAA0319LQ8IZA0 1049 aa20.29■□□□□ 0.84
COL20A1-207ENST00000494913 FAM167AQ96KS9 214 aa20.29■□□□□ 0.84
COL20A1-207ENST00000494913 CELF4Q9BZC1 486 aaKnown RBP20.29■□□□□ 0.84
COL20A1-207ENST00000494913 NRBP2Q9NSY0 501 aa20.29■□□□□ 0.84
COL20A1-207ENST00000494913 TRPV2Q9Y5S1 764 aa20.29■□□□□ 0.84
COL20A1-207ENST00000494913 IGSF9BQ9UPX0 1349 aa20.29■□□□□ 0.84
COL20A1-207ENST00000494913 MICAL3Q7RTP6 2002 aa20.28■□□□□ 0.84
COL20A1-207ENST00000494913 FAM205CA6NFA0 338 aa20.28■□□□□ 0.84
COL20A1-207ENST00000494913 ZNF862O60290 1169 aa20.28■□□□□ 0.84
COL20A1-207ENST00000494913 UPP2O95045 317 aa20.28■□□□□ 0.84
COL20A1-207ENST00000494913 GCFC2P16383 781 aaKnown RBP20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms