RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 STBD1O95210 358 aa19.3■□□□□ 0.68
SNX17-209ENST00000494893 GNAT1P11488 350 aa19.3■□□□□ 0.68
SNX17-209ENST00000494893 FXR1P51114 621 aaKnown RBP eCLIP19.3■□□□□ 0.68
SNX17-209ENST00000494893 TCTN1Q2MV58 587 aa19.3■□□□□ 0.68
SNX17-209ENST00000494893 RASIP1Q5U651 963 aa19.3■□□□□ 0.68
SNX17-209ENST00000494893 LRRC8DQ7L1W4 858 aa19.3■□□□□ 0.68
SNX17-209ENST00000494893 CCDC155Q8N6L0 562 aa19.3■□□□□ 0.68
SNX17-209ENST00000494893 RETREG2Q8NC44 543 aa19.3■□□□□ 0.68
SNX17-209ENST00000494893 RDM1Q8NG50 284 aa19.3■□□□□ 0.68
SNX17-209ENST00000494893 TCEAL9Q9UHQ7 104 aa19.3■□□□□ 0.68
SNX17-209ENST00000494893 TUBE1Q9UJT0 475 aa19.3■□□□□ 0.68
SNX17-209ENST00000494893 SCN5AQ14524 2016 aa19.3■□□□□ 0.68
SNX17-209ENST00000494893 HBP1O60381 514 aa19.29■□□□□ 0.68
SNX17-209ENST00000494893 NEMFO60524 1076 aa19.29■□□□□ 0.68
SNX17-209ENST00000494893 NBNO60934 754 aa19.29■□□□□ 0.68
SNX17-209ENST00000494893 MCM7P33993 719 aa19.29■□□□□ 0.68
SNX17-209ENST00000494893 THPOP40225 353 aa19.29■□□□□ 0.68
SNX17-209ENST00000494893 ZNF174Q15697 407 aa19.29■□□□□ 0.68
SNX17-209ENST00000494893 DEFB128Q7Z7B8 93 aa19.29■□□□□ 0.68
SNX17-209ENST00000494893 FOXD4L1Q9NU39 408 aa19.29■□□□□ 0.68
SNX17-209ENST00000494893 LAMA2P24043 3122 aaKnown RBP19.28■□□□□ 0.68
SNX17-209ENST00000494893 RRN3P2A6NIE6 340 aa19.28■□□□□ 0.68
SNX17-209ENST00000494893 PRKCEQ02156 737 aa19.28■□□□□ 0.68
SNX17-209ENST00000494893 CALCRLQ16602 461 aa19.28■□□□□ 0.68
SNX17-209ENST00000494893 LRIT3Q3SXY7 679 aa19.28■□□□□ 0.68
SNX17-209ENST00000494893 TTC38Q5R3I4 469 aa19.28■□□□□ 0.68
SNX17-209ENST00000494893 LARP1BQ659C4 914 aaKnown RBP19.28■□□□□ 0.68
SNX17-209ENST00000494893 TRMT1LQ7Z2T5 733 aaKnown RBP19.28■□□□□ 0.68
SNX17-209ENST00000494893 C4orf32Q8N8J7 132 aa19.28■□□□□ 0.68
SNX17-209ENST00000494893 CXXC1Q9P0U4 656 aaPredicted RBP19.28■□□□□ 0.68
SNX17-209ENST00000494893 WRAP73Q9P2S5 460 aaPredicted RBP19.28■□□□□ 0.68
SNX17-209ENST00000494893 TMEM150BA6NC51 233 aa19.27■□□□□ 0.68
SNX17-209ENST00000494893 CXCL10P02778 98 aa19.27■□□□□ 0.68
SNX17-209ENST00000494893 OATP04181 439 aa19.27■□□□□ 0.68
SNX17-209ENST00000494893 CTSHP09668 335 aa19.27■□□□□ 0.68
SNX17-209ENST00000494893 RFC2P35250 354 aa19.27■□□□□ 0.68
SNX17-209ENST00000494893 TRAPPC10P48553 1259 aa19.27■□□□□ 0.68
SNX17-209ENST00000494893 GNL2Q13823 731 aaKnown RBP19.27■□□□□ 0.68
SNX17-209ENST00000494893 PSRC1Q6PGN9 363 aaPredicted RBP19.27■□□□□ 0.68
SNX17-209ENST00000494893 MTHFD1LQ6UB35 978 aa19.27■□□□□ 0.68
SNX17-209ENST00000494893 RPAINQ86UA6 219 aa19.27■□□□□ 0.68
SNX17-209ENST00000494893 SLFN12Q8IYM2 578 aa19.27■□□□□ 0.68
SNX17-209ENST00000494893 BANK1Q8NDB2 785 aa19.27■□□□□ 0.68
SNX17-209ENST00000494893 BBXQ8WY36 941 aaPredicted RBP19.27■□□□□ 0.68
SNX17-209ENST00000494893 HERVK_113Q902F9 699 aa19.27■□□□□ 0.68
SNX17-209ENST00000494893 LRCH3Q96II8 777 aa19.27■□□□□ 0.68
SNX17-209ENST00000494893 PCDHB6Q9Y5E3 794 aa19.27■□□□□ 0.68
SNX17-209ENST00000494893 COL1A2P08123 1366 aa19.27■□□□□ 0.68
SNX17-209ENST00000494893 BAG4O95429 457 aaKnown RBP19.26■□□□□ 0.67
SNX17-209ENST00000494893 C22orf31O95567 290 aa19.26■□□□□ 0.67
SNX17-209ENST00000494893 FGBP02675 491 aa19.26■□□□□ 0.67
SNX17-209ENST00000494893 TXKP42681 527 aa19.26■□□□□ 0.67
SNX17-209ENST00000494893 MGAT3Q09327 533 aa19.26■□□□□ 0.67
SNX17-209ENST00000494893 EPHA7Q15375 998 aa19.26■□□□□ 0.67
SNX17-209ENST00000494893 ZNF484Q5JVG2 852 aa19.26■□□□□ 0.67
SNX17-209ENST00000494893 FAM26DQ5JW98 314 aa19.26■□□□□ 0.67
SNX17-209ENST00000494893 MCTP1Q6DN14 999 aa19.26■□□□□ 0.67
SNX17-209ENST00000494893 NCAPH2Q6IBW4 605 aa19.26■□□□□ 0.67
SNX17-209ENST00000494893 FAM109BQ6ICB4 259 aaPredicted RBP19.26■□□□□ 0.67
SNX17-209ENST00000494893 CKAP2LQ8IYA6 745 aa19.26■□□□□ 0.67
SNX17-209ENST00000494893 DNAJB3Q8WWF6 145 aa19.26■□□□□ 0.67
SNX17-209ENST00000494893 RNPC3Q96LT9 517 aaKnown RBP19.26■□□□□ 0.67
SNX17-209ENST00000494893 CEP89Q96ST8 783 aa19.26■□□□□ 0.67
SNX17-209ENST00000494893 TTC12Q9H892 705 aaPredicted RBP19.26■□□□□ 0.67
SNX17-209ENST00000494893 PCDHA2Q9Y5H9 948 aa19.26■□□□□ 0.67
SNX17-209ENST00000494893 WDR81Q562E7 1941 aa19.25■□□□□ 0.67
SNX17-209ENST00000494893 RSPH10B2B2RC85 870 aa19.25■□□□□ 0.67
SNX17-209ENST00000494893 H3BQV1 296 aa19.25■□□□□ 0.67
SNX17-209ENST00000494893 MARCH6O60337 910 aa19.25■□□□□ 0.67
SNX17-209ENST00000494893 CAND2O75155 1236 aa19.25■□□□□ 0.67
SNX17-209ENST00000494893 CHRNA1P02708 482 aa19.25■□□□□ 0.67
SNX17-209ENST00000494893 RSPH10BP0C881 870 aa19.25■□□□□ 0.67
SNX17-209ENST00000494893 KLRC1P26715 233 aa19.25■□□□□ 0.67
SNX17-209ENST00000494893 ORC2Q13416 577 aaPredicted RBP19.25■□□□□ 0.67
SNX17-209ENST00000494893 TARBP2Q15633 366 aaKnown RBP19.25■□□□□ 0.67
SNX17-209ENST00000494893 TAF2Q6P1X5 1199 aa19.25■□□□□ 0.67
SNX17-209ENST00000494893 OTOP2Q7RTS6 562 aa19.25■□□□□ 0.67
SNX17-209ENST00000494893 RPUSD2Q8IZ73 545 aaKnown RBP19.25■□□□□ 0.67
SNX17-209ENST00000494893 FAM167AQ96KS9 214 aa19.25■□□□□ 0.67
SNX17-209ENST00000494893 RGL1Q9NZL6 768 aa19.25■□□□□ 0.67
SNX17-209ENST00000494893 PCDHA12Q9UN75 941 aa19.25■□□□□ 0.67
SNX17-209ENST00000494893 TET1Q8NFU7 2136 aa19.25■□□□□ 0.67
SNX17-209ENST00000494893 PFKMP08237 780 aa19.24■□□□□ 0.67
SNX17-209ENST00000494893 DDIT3P35638 169 aa19.24■□□□□ 0.67
SNX17-209ENST00000494893 ANO5Q75V66 913 aa19.24■□□□□ 0.67
SNX17-209ENST00000494893 LINC01465Q8N7H1 131 aa19.24■□□□□ 0.67
SNX17-209ENST00000494893 TNPO1Q92973 898 aaKnown RBP19.24■□□□□ 0.67
SNX17-209ENST00000494893 DYDC2Q96IM9 177 aa19.24■□□□□ 0.67
SNX17-209ENST00000494893 SH2D3AQ9BRG2 576 aa19.24■□□□□ 0.67
SNX17-209ENST00000494893 FAM49AQ9H0Q0 323 aaPredicted RBP19.24■□□□□ 0.67
SNX17-209ENST00000494893 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.24■□□□□ 0.67
SNX17-209ENST00000494893 NOL7Q9UMY1 257 aaKnown RBP19.24■□□□□ 0.67
SNX17-209ENST00000494893 SIP14410 1827 aa19.23■□□□□ 0.67
SNX17-209ENST00000494893 SMIM35A0A1B0GVV1 85 aa19.23■□□□□ 0.67
SNX17-209ENST00000494893 POTEMA6NI47 508 aa19.23■□□□□ 0.67
SNX17-209ENST00000494893 P4HBP07237 508 aaKnown RBP19.23■□□□□ 0.67
SNX17-209ENST00000494893 OR52Z1P0C646 297 aa19.23■□□□□ 0.67
SNX17-209ENST00000494893 SYT1P21579 422 aa19.23■□□□□ 0.67
SNX17-209ENST00000494893 PSMC5P62195 406 aa19.23■□□□□ 0.67
SNX17-209ENST00000494893 XKR3Q5GH77 459 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms