RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 EIF4A3P38919 411 aaKnown RBP11.47□□□□□ -0.57
SAMM50-206ENST00000494795 ZBED6P86452 979 aa11.47□□□□□ -0.57
SAMM50-206ENST00000494795 PPP2R3AQ06190 1150 aa11.47□□□□□ -0.57
SAMM50-206ENST00000494795 PPP2R5CQ13362 524 aa11.47□□□□□ -0.57
SAMM50-206ENST00000494795 TEX35Q5T0J7 233 aa11.47□□□□□ -0.57
SAMM50-206ENST00000494795 FKBP15Q5T1M5 1219 aa11.47□□□□□ -0.57
SAMM50-206ENST00000494795 B3GNT9Q6UX72 402 aa11.47□□□□□ -0.57
SAMM50-206ENST00000494795 ARHGAP27Q6ZUM4 889 aa11.47□□□□□ -0.57
SAMM50-206ENST00000494795 MOB2Q70IA6 237 aa11.47□□□□□ -0.57
SAMM50-206ENST00000494795 TRIM59Q8IWR1 403 aa11.47□□□□□ -0.57
SAMM50-206ENST00000494795 RDH13Q8NBN7 331 aa11.47□□□□□ -0.57
SAMM50-206ENST00000494795 ERMNQ8TAM6 284 aa11.47□□□□□ -0.57
SAMM50-206ENST00000494795 FBXO41Q8TF61 875 aa11.47□□□□□ -0.57
SAMM50-206ENST00000494795 ZC3H15Q8WU90 426 aaKnown RBP11.47□□□□□ -0.57
SAMM50-206ENST00000494795 FAM84AQ96KN4 292 aa11.47□□□□□ -0.57
SAMM50-206ENST00000494795 TRERF1Q96PN7 1200 aa11.47□□□□□ -0.57
SAMM50-206ENST00000494795 PRDM10Q9NQV6 1147 aa11.47□□□□□ -0.57
SAMM50-206ENST00000494795 PCDHB13Q9Y5F0 798 aa11.47□□□□□ -0.57
SAMM50-206ENST00000494795 VWA5AO00534 786 aa11.47□□□□□ -0.57
SAMM50-206ENST00000494795 ZNF185O15231 689 aa11.47□□□□□ -0.57
SAMM50-206ENST00000494795 CCP110O43303 1012 aa11.47□□□□□ -0.57
SAMM50-206ENST00000494795 ATP1A1P05023 1023 aaKnown RBP11.47□□□□□ -0.57
SAMM50-206ENST00000494795 POLR2FP61218 127 aaKnown RBP11.47□□□□□ -0.57
SAMM50-206ENST00000494795 BAATQ14032 418 aaPredicted RBP11.47□□□□□ -0.57
SAMM50-206ENST00000494795 TKFCQ3LXA3 575 aa11.47□□□□□ -0.57
SAMM50-206ENST00000494795 FAM114A1Q8IWE2 563 aa11.47□□□□□ -0.57
SAMM50-206ENST00000494795 DRC1Q96MC2 740 aa11.47□□□□□ -0.57
SAMM50-206ENST00000494795 NAP1L4Q99733 375 aaKnown RBP11.47□□□□□ -0.57
SAMM50-206ENST00000494795 POLR3CQ9BUI4 534 aaPredicted RBP11.47□□□□□ -0.57
SAMM50-206ENST00000494795 LSM14BQ9BX40 385 aaKnown RBP11.47□□□□□ -0.57
SAMM50-206ENST00000494795 VPS33BQ9H267 617 aa11.47□□□□□ -0.57
SAMM50-206ENST00000494795 PPP1R9AQ9ULJ8 1098 aa11.47□□□□□ -0.57
SAMM50-206ENST00000494795 WDR46O15213 610 aaKnown RBP11.47□□□□□ -0.57
SAMM50-206ENST00000494795 CCNE2O96020 404 aa11.47□□□□□ -0.57
SAMM50-206ENST00000494795 NPEPPSP55786 919 aa11.47□□□□□ -0.57
SAMM50-206ENST00000494795 KCNH2Q12809 1159 aa11.47□□□□□ -0.57
SAMM50-206ENST00000494795 TRIM14Q14142 442 aa11.47□□□□□ -0.57
SAMM50-206ENST00000494795 KNOP1Q1ED39 458 aaKnown RBP11.47□□□□□ -0.57
SAMM50-206ENST00000494795 DCAF17Q5H9S7 520 aaPredicted RBP11.47□□□□□ -0.57
SAMM50-206ENST00000494795 PLA2G4FQ68DD2 849 aa11.47□□□□□ -0.57
SAMM50-206ENST00000494795 PSMB7Q99436 277 aa11.47□□□□□ -0.57
SAMM50-206ENST00000494795 SAMM50Q9Y512 469 aa11.47□□□□□ -0.57
SAMM50-206ENST00000494795 TESPA1A2RU30 521 aaPredicted RBP11.46□□□□□ -0.57
SAMM50-206ENST00000494795 MRPS25P82663 173 aaKnown RBP11.46□□□□□ -0.57
SAMM50-206ENST00000494795 PGM5Q15124 567 aa11.46□□□□□ -0.57
SAMM50-206ENST00000494795 CCDC122Q5T0U0 273 aa11.46□□□□□ -0.57
SAMM50-206ENST00000494795 HGSNATQ68CP4 663 aa11.46□□□□□ -0.57
SAMM50-206ENST00000494795 DPY19L2P1Q6NXN4 242 aa11.46□□□□□ -0.57
SAMM50-206ENST00000494795 TSG101Q99816 390 aa11.46□□□□□ -0.57
SAMM50-206ENST00000494795 SMARCAL1Q9NZC9 954 aa11.46□□□□□ -0.57
SAMM50-206ENST00000494795 SYNPO2Q9UMS6 1093 aa11.46□□□□□ -0.57
SAMM50-206ENST00000494795 USP20Q9Y2K6 914 aa11.46□□□□□ -0.57
SAMM50-206ENST00000494795 KIF5CO60282 957 aa11.46□□□□□ -0.58
SAMM50-206ENST00000494795 CLCN6P51797 869 aa11.46□□□□□ -0.58
SAMM50-206ENST00000494795 BACE1P56817 501 aa11.46□□□□□ -0.58
SAMM50-206ENST00000494795 MAPK7Q13164 816 aa11.46□□□□□ -0.58
SAMM50-206ENST00000494795 TMEM132BQ14DG7 1078 aa11.46□□□□□ -0.58
SAMM50-206ENST00000494795 KIFC3Q9BVG8 833 aa11.46□□□□□ -0.58
SAMM50-206ENST00000494795 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.46□□□□□ -0.58
SAMM50-206ENST00000494795 CAPN6Q9Y6Q1 641 aa11.46□□□□□ -0.58
SAMM50-206ENST00000494795 DOCK5Q9H7D0 1870 aa11.46□□□□□ -0.58
SAMM50-206ENST00000494795 RPTORQ8N122 1335 aa11.45□□□□□ -0.58
SAMM50-206ENST00000494795 PITPNM2Q9BZ72 1349 aa11.45□□□□□ -0.58
SAMM50-206ENST00000494795 PLA2G6O60733 806 aa11.45□□□□□ -0.58
SAMM50-206ENST00000494795 RGS20O76081 388 aa11.45□□□□□ -0.58
SAMM50-206ENST00000494795 PTPROQ16827 1216 aa11.45□□□□□ -0.58
SAMM50-206ENST00000494795 MNS1Q8NEH6 495 aa11.45□□□□□ -0.58
SAMM50-206ENST00000494795 RMDN3Q96TC7 470 aa11.45□□□□□ -0.58
SAMM50-206ENST00000494795 SH2D4AQ9H788 454 aa11.45□□□□□ -0.58
SAMM50-206ENST00000494795 PLAGL2Q9UPG8 496 aa11.45□□□□□ -0.58
SAMM50-206ENST00000494795 COL11A1P12107 1806 aaPredicted RBP11.45□□□□□ -0.58
SAMM50-206ENST00000494795 ADM5C9JUS6 153 aa11.45□□□□□ -0.58
SAMM50-206ENST00000494795 HIP1RO75146 1068 aa11.45□□□□□ -0.58
SAMM50-206ENST00000494795 SEMA3FQ13275 785 aa11.45□□□□□ -0.58
SAMM50-206ENST00000494795 TNFAIP1Q13829 316 aa11.45□□□□□ -0.58
SAMM50-206ENST00000494795 TCERG1LQ5VWI1 586 aa11.45□□□□□ -0.58
SAMM50-206ENST00000494795 CAPZA3Q96KX2 299 aa11.45□□□□□ -0.58
SAMM50-206ENST00000494795 PACSIN1Q9BY11 444 aa11.45□□□□□ -0.58
SAMM50-206ENST00000494795 AGO4Q9HCK5 861 aaKnown RBP11.45□□□□□ -0.58
SAMM50-206ENST00000494795 EHD2Q9NZN4 543 aa11.45□□□□□ -0.58
SAMM50-206ENST00000494795 TBCAO75347 108 aaKnown RBP11.45□□□□□ -0.58
SAMM50-206ENST00000494795 NR3C1P04150 777 aa11.45□□□□□ -0.58
SAMM50-206ENST00000494795 CYP2J2P51589 502 aa11.45□□□□□ -0.58
SAMM50-206ENST00000494795 MTMR1Q13613 665 aa11.45□□□□□ -0.58
SAMM50-206ENST00000494795 TREML2Q5T2D2 321 aa11.45□□□□□ -0.58
SAMM50-206ENST00000494795 SNRNP48Q6IEG0 339 aaKnown RBP11.45□□□□□ -0.58
SAMM50-206ENST00000494795 SCYL3Q8IZE3 742 aa11.45□□□□□ -0.58
SAMM50-206ENST00000494795 FAM133AQ8N9E0 248 aa11.45□□□□□ -0.58
SAMM50-206ENST00000494795 NOA1Q8NC60 698 aaKnown RBP11.45□□□□□ -0.58
SAMM50-206ENST00000494795 TEKT3Q9BXF9 490 aa11.45□□□□□ -0.58
SAMM50-206ENST00000494795 LRRC27Q9C0I9 530 aa11.45□□□□□ -0.58
SAMM50-206ENST00000494795 PCIF1Q9H4Z3 704 aa11.45□□□□□ -0.58
SAMM50-206ENST00000494795 GPRC5DQ9NZD1 345 aa11.45□□□□□ -0.58
SAMM50-206ENST00000494795 USO1O60763 962 aaKnown RBP11.44□□□□□ -0.58
SAMM50-206ENST00000494795 FAM13AO94988 1023 aa11.44□□□□□ -0.58
SAMM50-206ENST00000494795 TRIM49P0CI25 452 aa11.44□□□□□ -0.58
SAMM50-206ENST00000494795 TRIM49CP0CI26 452 aa11.44□□□□□ -0.58
SAMM50-206ENST00000494795 KIF11P52732 1056 aa11.44□□□□□ -0.58
SAMM50-206ENST00000494795 ODR4Q5SWX8 454 aa11.44□□□□□ -0.58
SAMM50-206ENST00000494795 RNF207Q6ZRF8 634 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms