RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 BBXQ8WY36 941 aaPredicted RBP17.95■□□□□ 0.46
LIME1-209ENST00000494776 HERVK_113Q902F9 699 aa17.95■□□□□ 0.46
LIME1-209ENST00000494776 LRCH3Q96II8 777 aa17.95■□□□□ 0.46
LIME1-209ENST00000494776 FAM167AQ96KS9 214 aa17.95■□□□□ 0.46
LIME1-209ENST00000494776 NRBP2Q9NSY0 501 aa17.95■□□□□ 0.46
LIME1-209ENST00000494776 NOL7Q9UMY1 257 aaKnown RBP17.95■□□□□ 0.46
LIME1-209ENST00000494776 MBLAC1A4D2B0 266 aaPredicted RBP17.94■□□□□ 0.46
LIME1-209ENST00000494776 NEMFO60524 1076 aa17.94■□□□□ 0.46
LIME1-209ENST00000494776 MCM7P33993 719 aa17.94■□□□□ 0.46
LIME1-209ENST00000494776 MARCH8Q5T0T0 291 aa17.94■□□□□ 0.46
LIME1-209ENST00000494776 DNAJB3Q8WWF6 145 aa17.94■□□□□ 0.46
LIME1-209ENST00000494776 HAS1Q92839 578 aa17.94■□□□□ 0.46
LIME1-209ENST00000494776 FAM49AQ9H0Q0 323 aaPredicted RBP17.94■□□□□ 0.46
LIME1-209ENST00000494776 CEP131Q9UPN4 1083 aa17.94■□□□□ 0.46
LIME1-209ENST00000494776 TRIP12Q14669 1992 aaPredicted RBP17.93■□□□□ 0.46
LIME1-209ENST00000494776 COL1A2P08123 1366 aa17.93■□□□□ 0.46
LIME1-209ENST00000494776 KAT6AQ92794 2004 aa17.93■□□□□ 0.46
LIME1-209ENST00000494776 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.93■□□□□ 0.46
LIME1-209ENST00000494776 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.93■□□□□ 0.46
LIME1-209ENST00000494776 RPLP2P05387 115 aaKnown RBP17.93■□□□□ 0.46
LIME1-209ENST00000494776 ATP4AP20648 1035 aa17.93■□□□□ 0.46
LIME1-209ENST00000494776 PRKCEQ02156 737 aa17.93■□□□□ 0.46
LIME1-209ENST00000494776 PPP2R5CQ13362 524 aa17.93■□□□□ 0.46
LIME1-209ENST00000494776 LARP1BQ659C4 914 aaKnown RBP17.93■□□□□ 0.46
LIME1-209ENST00000494776 NCAPH2Q6IBW4 605 aa17.93■□□□□ 0.46
LIME1-209ENST00000494776 MTHFD1LQ6UB35 978 aa17.93■□□□□ 0.46
LIME1-209ENST00000494776 ZBTB10Q96DT7 871 aa17.93■□□□□ 0.46
LIME1-209ENST00000494776 PCDHA12Q9UN75 941 aa17.93■□□□□ 0.46
LIME1-209ENST00000494776 IGSF9BQ9UPX0 1349 aa17.93■□□□□ 0.46
LIME1-209ENST00000494776 KIF28PB7ZC32 967 aa17.92■□□□□ 0.46
LIME1-209ENST00000494776 M0QZ92 97 aa17.92■□□□□ 0.46
LIME1-209ENST00000494776 NBNO60934 754 aa17.92■□□□□ 0.46
LIME1-209ENST00000494776 OATP04181 439 aa17.92■□□□□ 0.46
LIME1-209ENST00000494776 KLRC1P26715 233 aa17.92■□□□□ 0.46
LIME1-209ENST00000494776 TXKP42681 527 aa17.92■□□□□ 0.46
LIME1-209ENST00000494776 ZNF174Q15697 407 aa17.92■□□□□ 0.46
LIME1-209ENST00000494776 UGCGQ16739 394 aa17.92■□□□□ 0.46
LIME1-209ENST00000494776 GPR153Q6NV75 609 aa17.92■□□□□ 0.46
LIME1-209ENST00000494776 B3GNT9Q6UX72 402 aa17.92■□□□□ 0.46
LIME1-209ENST00000494776 BANK1Q8NDB2 785 aa17.92■□□□□ 0.46
LIME1-209ENST00000494776 VAV3Q9UKW4 847 aa17.92■□□□□ 0.46
LIME1-209ENST00000494776 PCDHA2Q9Y5H9 948 aa17.92■□□□□ 0.46
LIME1-209ENST00000494776 SLC4A7Q9Y6M7 1214 aa17.92■□□□□ 0.46
LIME1-209ENST00000494776 TANC1Q9C0D5 1861 aa17.91■□□□□ 0.46
LIME1-209ENST00000494776 EML1O00423 815 aa17.91■□□□□ 0.46
LIME1-209ENST00000494776 WNT7AO00755 349 aa17.91■□□□□ 0.46
LIME1-209ENST00000494776 DKC1O60832 514 aaKnown RBP eCLIP17.91■□□□□ 0.46
LIME1-209ENST00000494776 U2AF2P26368 475 aaKnown RBP eCLIP17.91■□□□□ 0.46
LIME1-209ENST00000494776 TRAPPC10P48553 1259 aa17.91■□□□□ 0.46
LIME1-209ENST00000494776 PSMC5P62195 406 aa17.91■□□□□ 0.46
LIME1-209ENST00000494776 SMAD3P84022 425 aaKnown RBP17.91■□□□□ 0.46
LIME1-209ENST00000494776 CUL4AQ13619 759 aa17.91■□□□□ 0.46
LIME1-209ENST00000494776 TTC38Q5R3I4 469 aa17.91■□□□□ 0.46
LIME1-209ENST00000494776 IER5Q5VY09 327 aa17.91■□□□□ 0.46
LIME1-209ENST00000494776 CNKSR3Q6P9H4 555 aa17.91■□□□□ 0.46
LIME1-209ENST00000494776 TRAF7Q6Q0C0 670 aa17.91■□□□□ 0.46
LIME1-209ENST00000494776 RPAINQ86UA6 219 aa17.91■□□□□ 0.46
LIME1-209ENST00000494776 VWCEQ96DN2 955 aa17.91■□□□□ 0.46
LIME1-209ENST00000494776 TTC12Q9H892 705 aaPredicted RBP17.91■□□□□ 0.46
LIME1-209ENST00000494776 CXXC1Q9P0U4 656 aaPredicted RBP17.91■□□□□ 0.46
LIME1-209ENST00000494776 SEPT9Q9UHD8 586 aaPredicted RBP17.91■□□□□ 0.46
LIME1-209ENST00000494776 SCN5AQ14524 2016 aa17.9■□□□□ 0.46
LIME1-209ENST00000494776 SMIM35A0A1B0GVV1 85 aa17.9■□□□□ 0.46
LIME1-209ENST00000494776 DDX11L8A8MPP1 907 aa17.9■□□□□ 0.46
LIME1-209ENST00000494776 K7ELQ4 463 aaPredicted RBP17.9■□□□□ 0.46
LIME1-209ENST00000494776 ZNF862O60290 1169 aa17.9■□□□□ 0.46
LIME1-209ENST00000494776 CXCL10P02778 98 aa17.9■□□□□ 0.46
LIME1-209ENST00000494776 P4HBP07237 508 aaKnown RBP17.9■□□□□ 0.46
LIME1-209ENST00000494776 QARSP47897 775 aaKnown RBP17.9■□□□□ 0.46
LIME1-209ENST00000494776 ORC2Q13416 577 aaPredicted RBP17.9■□□□□ 0.46
LIME1-209ENST00000494776 MBTPS1Q14703 1052 aa17.9■□□□□ 0.46
LIME1-209ENST00000494776 GPNMBQ14956 572 aa17.9■□□□□ 0.46
LIME1-209ENST00000494776 EPHA7Q15375 998 aa17.9■□□□□ 0.46
LIME1-209ENST00000494776 XKR3Q5GH77 459 aa17.9■□□□□ 0.46
LIME1-209ENST00000494776 FAM26DQ5JW98 314 aa17.9■□□□□ 0.46
LIME1-209ENST00000494776 RASIP1Q5U651 963 aa17.9■□□□□ 0.46
LIME1-209ENST00000494776 METTL13Q8N6R0 699 aa17.9■□□□□ 0.46
LIME1-209ENST00000494776 MAGEB2O15479 319 aa17.89■□□□□ 0.45
LIME1-209ENST00000494776 BAIAP3O94812 1187 aa17.89■□□□□ 0.45
LIME1-209ENST00000494776 CHRNA1P02708 482 aa17.89■□□□□ 0.45
LIME1-209ENST00000494776 KCNJ6P48051 423 aa17.89■□□□□ 0.45
LIME1-209ENST00000494776 MRPS6P82932 125 aaKnown RBP17.89■□□□□ 0.45
LIME1-209ENST00000494776 TMEM62Q0P6H9 643 aa17.89■□□□□ 0.45
LIME1-209ENST00000494776 IKBKEQ14164 716 aa17.89■□□□□ 0.45
LIME1-209ENST00000494776 NME8Q8N427 588 aa17.89■□□□□ 0.45
LIME1-209ENST00000494776 SEPT8Q92599 483 aa17.89■□□□□ 0.45
LIME1-209ENST00000494776 MTMR9Q96QG7 549 aa17.89■□□□□ 0.45
LIME1-209ENST00000494776 CDY2AQ9Y6F7 541 aa17.89■□□□□ 0.45
LIME1-209ENST00000494776 MYH9P35579 1960 aaKnown RBP17.88■□□□□ 0.45
LIME1-209ENST00000494776 GRXCR1A8MXD5 290 aa17.88■□□□□ 0.45
LIME1-209ENST00000494776 ZBTB42B2RXF5 422 aa17.88■□□□□ 0.45
LIME1-209ENST00000494776 C22orf31O95567 290 aa17.88■□□□□ 0.45
LIME1-209ENST00000494776 OR52Z1P0C646 297 aa17.88■□□□□ 0.45
LIME1-209ENST00000494776 ATP2A2P16615 1042 aaKnown RBP17.88■□□□□ 0.45
LIME1-209ENST00000494776 PDCP20941 246 aa17.88■□□□□ 0.45
LIME1-209ENST00000494776 TMOD1P28289 359 aa17.88■□□□□ 0.45
LIME1-209ENST00000494776 MTERF2Q49AM1 385 aa17.88■□□□□ 0.45
LIME1-209ENST00000494776 HSCBQ8IWL3 235 aa17.88■□□□□ 0.45
LIME1-209ENST00000494776 DBF4BQ8NFT6 615 aa17.88■□□□□ 0.45
LIME1-209ENST00000494776 TMEM60Q9H2L4 133 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms