RNA–Protein interactions for RNA: ENST00000494672.1

CCDC66-222, Transcript of coiled-coil domain containing 66, humanhuman

TSL 4

Gene CCDC66, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-222ENST00000494672 PTGS1P23219 599 aa6.62□□□□□ -1.35
CCDC66-222ENST00000494672 SELENOPP49908 381 aa6.62□□□□□ -1.35
CCDC66-222ENST00000494672 HERVK_113P62684 666 aa6.62□□□□□ -1.35
CCDC66-222ENST00000494672 RASA3Q14644 834 aa6.62□□□□□ -1.35
CCDC66-222ENST00000494672 CDSNQ15517 529 aa6.62□□□□□ -1.35
CCDC66-222ENST00000494672 ZMAT1Q5H9K5 638 aa6.62□□□□□ -1.35
CCDC66-222ENST00000494672 TAF7LQ5H9L4 462 aa6.62□□□□□ -1.35
CCDC66-222ENST00000494672 CXXC5Q7LFL8 322 aaKnown RBP6.62□□□□□ -1.35
CCDC66-222ENST00000494672 SPRED1Q7Z699 444 aa6.62□□□□□ -1.35
CCDC66-222ENST00000494672 GIMAP8Q8ND71 665 aaPredicted RBP6.62□□□□□ -1.35
CCDC66-222ENST00000494672 WDR48Q8TAF3 677 aa6.62□□□□□ -1.35
CCDC66-222ENST00000494672 Q8TCH9 128 aa6.62□□□□□ -1.35
CCDC66-222ENST00000494672 INCENPQ9NQS7 918 aa6.62□□□□□ -1.35
CCDC66-222ENST00000494672 NDOR1Q9UHB4 597 aa6.62□□□□□ -1.35
CCDC66-222ENST00000494672 FBXO10Q9UK96 956 aa6.62□□□□□ -1.35
CCDC66-222ENST00000494672 CCDC163A0A0D9SF12 145 aa6.61□□□□□ -1.35
CCDC66-222ENST00000494672 FAM221BA6H8Z2 402 aa6.61□□□□□ -1.35
CCDC66-222ENST00000494672 PRAMEF25A6NGN4 478 aa6.61□□□□□ -1.35
CCDC66-222ENST00000494672 C4BPAP04003 597 aaKnown RBP6.61□□□□□ -1.35
CCDC66-222ENST00000494672 ZNF888P0CJ79 500 aaPredicted RBP6.61□□□□□ -1.35
CCDC66-222ENST00000494672 RAC3P60763 192 aa6.61□□□□□ -1.35
CCDC66-222ENST00000494672 TOP3AQ13472 1001 aaPredicted RBP6.61□□□□□ -1.35
CCDC66-222ENST00000494672 PALM2Q8IXS6 379 aa6.61□□□□□ -1.35
CCDC66-222ENST00000494672 NEIL1Q96FI4 390 aaPredicted RBP6.61□□□□□ -1.35
CCDC66-222ENST00000494672 SCYL1Q96KG9 808 aa6.61□□□□□ -1.35
CCDC66-222ENST00000494672 GNRHR2Q96P88 292 aa6.61□□□□□ -1.35
CCDC66-222ENST00000494672 DNAJC7Q99615 494 aa6.61□□□□□ -1.35
CCDC66-222ENST00000494672 CHMP4AQ9BY43 222 aa6.61□□□□□ -1.35
CCDC66-222ENST00000494672 TESMINQ9Y4I5 508 aa6.61□□□□□ -1.35
CCDC66-222ENST00000494672 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.6□□□□□ -1.35
CCDC66-222ENST00000494672 KCNK3O14649 394 aa6.6□□□□□ -1.35
CCDC66-222ENST00000494672 MUSKO15146 869 aa6.6□□□□□ -1.35
CCDC66-222ENST00000494672 CDK11BP21127 795 aaKnown RBP6.6□□□□□ -1.35
CCDC66-222ENST00000494672 AOAHP28039 575 aa6.6□□□□□ -1.35
CCDC66-222ENST00000494672 ETV4P43268 484 aa6.6□□□□□ -1.35
CCDC66-222ENST00000494672 TCTN3Q6NUS6 607 aa6.6□□□□□ -1.35
CCDC66-222ENST00000494672 MKL1Q969V6 931 aa6.6□□□□□ -1.35
CCDC66-222ENST00000494672 WWC2-AS2Q96NR7 200 aa6.6□□□□□ -1.35
CCDC66-222ENST00000494672 SRPK1Q96SB4 655 aaKnown RBP6.6□□□□□ -1.35
CCDC66-222ENST00000494672 BTBD2Q9BX70 525 aa6.6□□□□□ -1.35
CCDC66-222ENST00000494672 ZDHHC5Q9C0B5 715 aa6.6□□□□□ -1.35
CCDC66-222ENST00000494672 SLC52A2Q9HAB3 445 aa6.6□□□□□ -1.35
CCDC66-222ENST00000494672 SMURF1Q9HCE7 757 aa6.6□□□□□ -1.35
CCDC66-222ENST00000494672 SNTG2Q9NY99 539 aa6.6□□□□□ -1.35
CCDC66-222ENST00000494672 PTPN22Q9Y2R2 807 aa6.6□□□□□ -1.35
CCDC66-222ENST00000494672 FSHBP01225 129 aa6.59□□□□□ -1.35
CCDC66-222ENST00000494672 TAX1BP1Q86VP1 789 aa6.59□□□□□ -1.35
CCDC66-222ENST00000494672 WNK4Q96J92 1243 aa6.59□□□□□ -1.35
CCDC66-222ENST00000494672 ZFR2Q9UPR6 939 aaKnown RBP6.59□□□□□ -1.35
CCDC66-222ENST00000494672 FOXS1O43638 330 aa6.58□□□□□ -1.36
CCDC66-222ENST00000494672 AKAP8O43823 692 aaKnown RBP6.58□□□□□ -1.36
CCDC66-222ENST00000494672 RRADP55042 308 aa6.58□□□□□ -1.36
CCDC66-222ENST00000494672 IL13RA1P78552 427 aa6.58□□□□□ -1.36
CCDC66-222ENST00000494672 STILQ15468 1287 aa6.58□□□□□ -1.36
CCDC66-222ENST00000494672 CISD2Q8N5K1 135 aaKnown RBP6.58□□□□□ -1.36
CCDC66-222ENST00000494672 GSTCDQ8NEC7 633 aa6.58□□□□□ -1.36
CCDC66-222ENST00000494672 ZSWIM2Q8NEG5 633 aa6.58□□□□□ -1.36
CCDC66-222ENST00000494672 BTBD7Q9P203 1132 aa6.58□□□□□ -1.36
CCDC66-222ENST00000494672 SRRDQ9UH36 339 aa6.58□□□□□ -1.36
CCDC66-222ENST00000494672 SCDO00767 359 aa6.57□□□□□ -1.36
CCDC66-222ENST00000494672 NPTXRO95502 500 aa6.57□□□□□ -1.36
CCDC66-222ENST00000494672 HMGCRP04035 888 aa6.57□□□□□ -1.36
CCDC66-222ENST00000494672 HMGB1P09429 215 aaKnown RBP6.57□□□□□ -1.36
CCDC66-222ENST00000494672 C6P13671 934 aa6.57□□□□□ -1.36
CCDC66-222ENST00000494672 CR2P20023 1033 aa6.57□□□□□ -1.36
CCDC66-222ENST00000494672 MC4RP32245 332 aa6.57□□□□□ -1.36
CCDC66-222ENST00000494672 ECE1P42892 770 aa6.57□□□□□ -1.36
CCDC66-222ENST00000494672 R3HDM1Q15032 1099 aaKnown RBP6.57□□□□□ -1.36
CCDC66-222ENST00000494672 TRIM61Q5EBN2 209 aa6.57□□□□□ -1.36
CCDC66-222ENST00000494672 SLC7A14Q8TBB6 771 aa6.57□□□□□ -1.36
CCDC66-222ENST00000494672 THAP3Q8WTV1 239 aaPredicted RBP6.57□□□□□ -1.36
CCDC66-222ENST00000494672 CELF4Q9BZC1 486 aaKnown RBP6.57□□□□□ -1.36
CCDC66-222ENST00000494672 KCNH7Q9NS40 1196 aa6.57□□□□□ -1.36
CCDC66-222ENST00000494672 UCKL1Q9NWZ5 548 aa6.57□□□□□ -1.36
CCDC66-222ENST00000494672 COQ6Q9Y2Z9 468 aa6.57□□□□□ -1.36
CCDC66-222ENST00000494672 NR2E1Q9Y466 385 aa6.57□□□□□ -1.36
CCDC66-222ENST00000494672 SHROOM4Q9ULL8 1493 aa6.56□□□□□ -1.36
CCDC66-222ENST00000494672 AMHP03971 560 aa6.56□□□□□ -1.36
CCDC66-222ENST00000494672 TACR2P21452 398 aa6.56□□□□□ -1.36
CCDC66-222ENST00000494672 ADCY8P40145 1251 aa6.56□□□□□ -1.36
CCDC66-222ENST00000494672 GDF5P43026 501 aa6.56□□□□□ -1.36
CCDC66-222ENST00000494672 KCNQ1P51787 676 aa6.56□□□□□ -1.36
CCDC66-222ENST00000494672 EIF4HQ15056 248 aaKnown RBP6.56□□□□□ -1.36
CCDC66-222ENST00000494672 PRKD1Q15139 912 aaPredicted RBP6.56□□□□□ -1.36
CCDC66-222ENST00000494672 SEC23AQ15436 765 aa6.56□□□□□ -1.36
CCDC66-222ENST00000494672 RNF151Q2KHN1 245 aa6.56□□□□□ -1.36
CCDC66-222ENST00000494672 JMYQ8N9B5 988 aa6.56□□□□□ -1.36
CCDC66-222ENST00000494672 SLC16A11Q8NCK7 471 aa6.56□□□□□ -1.36
CCDC66-222ENST00000494672 GBP4Q96PP9 640 aa6.56□□□□□ -1.36
CCDC66-222ENST00000494672 MRPL4Q9BYD3 311 aaKnown RBP6.56□□□□□ -1.36
CCDC66-222ENST00000494672 VPS11Q9H270 941 aa6.56□□□□□ -1.36
CCDC66-222ENST00000494672 C12orf65Q9H3J6 166 aaKnown RBP6.56□□□□□ -1.36
CCDC66-222ENST00000494672 SFMBT1Q9UHJ3 866 aa6.56□□□□□ -1.36
CCDC66-222ENST00000494672 SLC12A8A0AV02 714 aa6.55□□□□□ -1.36
CCDC66-222ENST00000494672 KCNQ2O43526 872 aa6.55□□□□□ -1.36
CCDC66-222ENST00000494672 RASGRP1O95267 797 aa6.55□□□□□ -1.36
CCDC66-222ENST00000494672 MMEP08473 750 aa6.55□□□□□ -1.36
CCDC66-222ENST00000494672 COMTP21964 271 aa6.55□□□□□ -1.36
CCDC66-222ENST00000494672 NOLC1Q14978 699 aaKnown RBP eCLIP6.55□□□□□ -1.36
CCDC66-222ENST00000494672 SF3A1Q15459 793 aaKnown RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms