RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 WDR18Q9BV38 432 aa12.31□□□□□ -0.44
CHMP3-209ENST00000494623 GANQ9H2C0 597 aa12.31□□□□□ -0.44
CHMP3-209ENST00000494623 HERC5Q9UII4 1024 aaKnown RBP12.31□□□□□ -0.44
CHMP3-209ENST00000494623 FAN1Q9Y2M0 1017 aa12.31□□□□□ -0.44
CHMP3-209ENST00000494623 IGLV3-22A0A075B6J6 115 aa12.31□□□□□ -0.44
CHMP3-209ENST00000494623 GCOM1H8Y6P7 765 aaPredicted RBP12.31□□□□□ -0.44
CHMP3-209ENST00000494623 RBAK-RBAKDNI3L0D1 243 aa12.31□□□□□ -0.44
CHMP3-209ENST00000494623 PIK3CDO00329 1044 aa12.31□□□□□ -0.44
CHMP3-209ENST00000494623 PDXKO00764 312 aa12.31□□□□□ -0.44
CHMP3-209ENST00000494623 SLITRK3O94933 977 aa12.31□□□□□ -0.44
CHMP3-209ENST00000494623 AFPP02771 609 aaKnown RBP12.31□□□□□ -0.44
CHMP3-209ENST00000494623 POLR2MP0CAP2 368 aa12.31□□□□□ -0.44
CHMP3-209ENST00000494623 MYBL2P10244 700 aa12.31□□□□□ -0.44
CHMP3-209ENST00000494623 XRCC5P13010 732 aaKnown RBP12.31□□□□□ -0.44
CHMP3-209ENST00000494623 POLD1P28340 1107 aa12.31□□□□□ -0.44
CHMP3-209ENST00000494623 SLC7A5Q01650 507 aa12.31□□□□□ -0.44
CHMP3-209ENST00000494623 LRCH2Q5VUJ6 765 aa12.31□□□□□ -0.44
CHMP3-209ENST00000494623 MIGA2Q7L4E1 593 aa12.31□□□□□ -0.44
CHMP3-209ENST00000494623 RNF10Q8N5U6 811 aaKnown RBP12.31□□□□□ -0.44
CHMP3-209ENST00000494623 MYCT1Q8N699 235 aa12.31□□□□□ -0.44
CHMP3-209ENST00000494623 TLR10Q9BXR5 811 aa12.31□□□□□ -0.44
CHMP3-209ENST00000494623 IKZF4Q9H2S9 585 aa12.31□□□□□ -0.44
CHMP3-209ENST00000494623 VEZTQ9HBM0 779 aa12.31□□□□□ -0.44
CHMP3-209ENST00000494623 AIPL1Q9NZN9 384 aa12.31□□□□□ -0.44
CHMP3-209ENST00000494623 TMX2Q9Y320 296 aa12.31□□□□□ -0.44
CHMP3-209ENST00000494623 PCDHB13Q9Y5F0 798 aa12.31□□□□□ -0.44
CHMP3-209ENST00000494623 MYH10P35580 1976 aa12.31□□□□□ -0.44
CHMP3-209ENST00000494623 PALMO75781 387 aa12.31□□□□□ -0.44
CHMP3-209ENST00000494623 NR3C1P04150 777 aa12.31□□□□□ -0.44
CHMP3-209ENST00000494623 KLRC1P26715 233 aa12.31□□□□□ -0.44
CHMP3-209ENST00000494623 PAFAH1B1P43034 410 aa12.31□□□□□ -0.44
CHMP3-209ENST00000494623 LMAN1P49257 510 aa12.31□□□□□ -0.44
CHMP3-209ENST00000494623 DLGAP5Q15398 846 aa12.31□□□□□ -0.44
CHMP3-209ENST00000494623 SLC18A3Q16572 532 aa12.31□□□□□ -0.44
CHMP3-209ENST00000494623 KIAA0753Q2KHM9 967 aa12.31□□□□□ -0.44
CHMP3-209ENST00000494623 MS4A14Q96JA4 679 aa12.31□□□□□ -0.44
CHMP3-209ENST00000494623 SPAG5Q96R06 1193 aa12.31□□□□□ -0.44
CHMP3-209ENST00000494623 PACSIN1Q9BY11 444 aa12.31□□□□□ -0.44
CHMP3-209ENST00000494623 ACBD3Q9H3P7 528 aa12.31□□□□□ -0.44
CHMP3-209ENST00000494623 GOPCQ9HD26 462 aa12.31□□□□□ -0.44
CHMP3-209ENST00000494623 LUC7LQ9NQ29 371 aaKnown RBP12.31□□□□□ -0.44
CHMP3-209ENST00000494623 ZBTB12Q9Y330 459 aaPredicted RBP12.31□□□□□ -0.44
CHMP3-209ENST00000494623 SMCHD1A6NHR9 2005 aa12.3□□□□□ -0.44
CHMP3-209ENST00000494623 SPDYE2BA6NHP3 402 aa12.3□□□□□ -0.44
CHMP3-209ENST00000494623 FAM13AO94988 1023 aa12.3□□□□□ -0.44
CHMP3-209ENST00000494623 SPDYE6P0CI01 402 aa12.3□□□□□ -0.44
CHMP3-209ENST00000494623 NMT1P30419 496 aaKnown RBP12.3□□□□□ -0.44
CHMP3-209ENST00000494623 EXOC3L4Q17RC7 722 aa12.3□□□□□ -0.44
CHMP3-209ENST00000494623 MMGT1Q8N4V1 131 aa12.3□□□□□ -0.44
CHMP3-209ENST00000494623 MSL3Q8N5Y2 521 aaKnown RBP12.3□□□□□ -0.44
CHMP3-209ENST00000494623 SUPT20HQ8NEM7 779 aa12.3□□□□□ -0.44
CHMP3-209ENST00000494623 HSD17B14Q9BPX1 270 aa12.3□□□□□ -0.44
CHMP3-209ENST00000494623 TYW1Q9NV66 732 aaKnown RBP12.3□□□□□ -0.44
CHMP3-209ENST00000494623 ZNF70Q9UC06 446 aaPredicted RBP12.3□□□□□ -0.44
CHMP3-209ENST00000494623 DMGDHQ9UI17 866 aaKnown RBP12.3□□□□□ -0.44
CHMP3-209ENST00000494623 CCDC66A2RUB6 948 aa12.3□□□□□ -0.44
CHMP3-209ENST00000494623 FTCDO95954 541 aa12.3□□□□□ -0.44
CHMP3-209ENST00000494623 UCHL3P15374 230 aa12.3□□□□□ -0.44
CHMP3-209ENST00000494623 RPL13P26373 211 aaKnown RBP12.3□□□□□ -0.44
CHMP3-209ENST00000494623 PON1P27169 355 aa12.3□□□□□ -0.44
CHMP3-209ENST00000494623 NAB2Q15742 525 aa12.3□□□□□ -0.44
CHMP3-209ENST00000494623 ZC2HC1CQ53FD0 456 aaPredicted RBP12.3□□□□□ -0.44
CHMP3-209ENST00000494623 DNAAF5Q86Y56 855 aa12.3□□□□□ -0.44
CHMP3-209ENST00000494623 KSR1Q8IVT5 923 aa12.3□□□□□ -0.44
CHMP3-209ENST00000494623 CDAN1Q8IWY9 1227 aa12.3□□□□□ -0.44
CHMP3-209ENST00000494623 EPB41P11171 864 aaKnown RBP12.29□□□□□ -0.44
CHMP3-209ENST00000494623 PTK2Q05397 1052 aa12.29□□□□□ -0.44
CHMP3-209ENST00000494623 RSBN1LQ6PCB5 846 aaPredicted RBP12.29□□□□□ -0.44
CHMP3-209ENST00000494623 FAM151AQ8WW52 585 aa12.29□□□□□ -0.44
CHMP3-209ENST00000494623 EXOC4Q96A65 974 aa12.29□□□□□ -0.44
CHMP3-209ENST00000494623 ZBTB21Q9ULJ3 1066 aa12.29□□□□□ -0.44
CHMP3-209ENST00000494623 ASTN1O14525 1302 aa12.29□□□□□ -0.44
CHMP3-209ENST00000494623 GAS7O60861 476 aa12.29□□□□□ -0.44
CHMP3-209ENST00000494623 PSMD10O75832 226 aa12.29□□□□□ -0.44
CHMP3-209ENST00000494623 DPY19L2P1Q6NXN4 242 aa12.29□□□□□ -0.44
CHMP3-209ENST00000494623 ZNF571Q7Z3V5 609 aaPredicted RBP12.29□□□□□ -0.44
CHMP3-209ENST00000494623 IRF2BP2Q7Z5L9 587 aa12.29□□□□□ -0.44
CHMP3-209ENST00000494623 OGFOD1Q8N543 542 aa12.29□□□□□ -0.44
CHMP3-209ENST00000494623 CHURC1Q8WUH1 139 aa12.29□□□□□ -0.44
CHMP3-209ENST00000494623 SELENOOQ9BVL4 669 aa12.29□□□□□ -0.44
CHMP3-209ENST00000494623 FBXO28Q9NVF7 368 aa12.29□□□□□ -0.44
CHMP3-209ENST00000494623 HPCAL4Q9UM19 191 aa12.29□□□□□ -0.44
CHMP3-209ENST00000494623 PACSIN2Q9UNF0 486 aaPredicted RBP12.29□□□□□ -0.44
CHMP3-209ENST00000494623 TGFB1I1O43294 461 aa12.28□□□□□ -0.44
CHMP3-209ENST00000494623 ARP10275 920 aa12.28□□□□□ -0.44
CHMP3-209ENST00000494623 HNRNPH2P55795 449 aaKnown RBP12.28□□□□□ -0.44
CHMP3-209ENST00000494623 RNASE9P60153 205 aaKnown RBP12.28□□□□□ -0.44
CHMP3-209ENST00000494623 TRAF1Q13077 416 aa12.28□□□□□ -0.44
CHMP3-209ENST00000494623 C1orf186Q6ZWK4 172 aa12.28□□□□□ -0.44
CHMP3-209ENST00000494623 FAM71BQ8TC56 605 aa12.28□□□□□ -0.44
CHMP3-209ENST00000494623 ZNF577Q9BSK1 485 aa12.28□□□□□ -0.44
CHMP3-209ENST00000494623 TMEM39BQ9GZU3 492 aa12.28□□□□□ -0.44
CHMP3-209ENST00000494623 VIPAS39Q9H9C1 493 aa12.28□□□□□ -0.44
CHMP3-209ENST00000494623 METTL14Q9HCE5 456 aaKnown RBP12.28□□□□□ -0.44
CHMP3-209ENST00000494623 TUFT1Q9NNX1 390 aa12.28□□□□□ -0.44
CHMP3-209ENST00000494623 PRELPP51888 382 aa12.28□□□□□ -0.44
CHMP3-209ENST00000494623 BMT2Q1RMZ1 405 aa12.28□□□□□ -0.44
CHMP3-209ENST00000494623 GJB7Q6PEY0 223 aa12.28□□□□□ -0.44
CHMP3-209ENST00000494623 GBP6Q6ZN66 633 aa12.28□□□□□ -0.44
CHMP3-209ENST00000494623 ZNF572Q7Z3I7 529 aaPredicted RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms