RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 TARS2Q9BW92 718 aaKnown RBP6.3□□□□□ -1.4
SMC4-224ENST00000494612 JAM3Q9BX67 310 aa6.3□□□□□ -1.4
SMC4-224ENST00000494612 SPC25Q9HBM1 224 aa6.3□□□□□ -1.4
SMC4-224ENST00000494612 ASH2LQ9UBL3 628 aa6.3□□□□□ -1.4
SMC4-224ENST00000494612 ADAM29Q9UKF5 820 aa6.3□□□□□ -1.4
SMC4-224ENST00000494612 PLAAQ9Y263 795 aa6.3□□□□□ -1.4
SMC4-224ENST00000494612 KPNA6O60684 536 aa6.29□□□□□ -1.4
SMC4-224ENST00000494612 KLHL18O94889 574 aa6.29□□□□□ -1.4
SMC4-224ENST00000494612 TM4SF20Q53R12 229 aa6.29□□□□□ -1.4
SMC4-224ENST00000494612 TMC5Q6UXY8 1006 aa6.29□□□□□ -1.4
SMC4-224ENST00000494612 LBX2Q6XYB7 198 aa6.29□□□□□ -1.4
SMC4-224ENST00000494612 LRRTM3Q86VH5 581 aa6.29□□□□□ -1.4
SMC4-224ENST00000494612 TTLL11Q8NHH1 800 aa6.29□□□□□ -1.4
SMC4-224ENST00000494612 GPATCH3Q96I76 525 aa6.29□□□□□ -1.4
SMC4-224ENST00000494612 PDGFDQ9GZP0 370 aaPredicted RBP6.29□□□□□ -1.4
SMC4-224ENST00000494612 MEGF9Q9H1U4 602 aa6.29□□□□□ -1.4
SMC4-224ENST00000494612 IPPKQ9H8X2 491 aa6.29□□□□□ -1.4
SMC4-224ENST00000494612 SLC6A20Q9NP91 592 aa6.29□□□□□ -1.4
SMC4-224ENST00000494612 FTSJ1Q9UET6 329 aa6.29□□□□□ -1.4
SMC4-224ENST00000494612 COQ6Q9Y2Z9 468 aa6.29□□□□□ -1.4
SMC4-224ENST00000494612 TCAF1Q9Y4C2 921 aa6.29□□□□□ -1.4
SMC4-224ENST00000494612 A0A087X0B3 334 aa6.28□□□□□ -1.4
SMC4-224ENST00000494612 TCRBV16S1A1N1A0A5B0 115 aa6.28□□□□□ -1.4
SMC4-224ENST00000494612 PDE8AO60658 829 aa6.28□□□□□ -1.4
SMC4-224ENST00000494612 JMJD7P0C870 316 aa6.28□□□□□ -1.4
SMC4-224ENST00000494612 COL6A2P12110 1019 aa6.28□□□□□ -1.4
SMC4-224ENST00000494612 DNM2P50570 870 aa6.28□□□□□ -1.4
SMC4-224ENST00000494612 PCBP1Q15365 356 aaKnown RBP eCLIP6.28□□□□□ -1.4
SMC4-224ENST00000494612 TRMT10BQ6PF06 316 aaKnown RBP6.28□□□□□ -1.4
SMC4-224ENST00000494612 RSPO2Q6UXX9 243 aaPredicted RBP6.28□□□□□ -1.4
SMC4-224ENST00000494612 NUDT10Q8NFP7 164 aa6.28□□□□□ -1.4
SMC4-224ENST00000494612 LEO1Q8WVC0 666 aaPredicted RBP6.28□□□□□ -1.4
SMC4-224ENST00000494612 CLEC4DQ8WXI8 215 aa6.28□□□□□ -1.4
SMC4-224ENST00000494612 NUDT11Q96G61 164 aa6.28□□□□□ -1.4
SMC4-224ENST00000494612 ALG1Q9BT22 464 aa6.28□□□□□ -1.4
SMC4-224ENST00000494612 ZNF341Q9BYN7 854 aa6.28□□□□□ -1.4
SMC4-224ENST00000494612 BARX1Q9HBU1 254 aaPredicted RBP6.28□□□□□ -1.4
SMC4-224ENST00000494612 MAGEC2Q9UBF1 373 aaPredicted RBP6.28□□□□□ -1.4
SMC4-224ENST00000494612 ZDHHC9Q9Y397 364 aa6.28□□□□□ -1.4
SMC4-224ENST00000494612 ZNF623O75123 536 aa6.27□□□□□ -1.41
SMC4-224ENST00000494612 SOD2P04179 222 aa6.27□□□□□ -1.41
SMC4-224ENST00000494612 APPP05067 770 aa6.27□□□□□ -1.41
SMC4-224ENST00000494612 NCLP19338 710 aaKnown RBP6.27□□□□□ -1.41
SMC4-224ENST00000494612 TGM1P22735 817 aa6.27□□□□□ -1.41
SMC4-224ENST00000494612 FHL2Q14192 279 aa6.27□□□□□ -1.41
SMC4-224ENST00000494612 SMN1Q16637 294 aaKnown RBP6.27□□□□□ -1.41
SMC4-224ENST00000494612 PTPROQ16827 1216 aa6.27□□□□□ -1.41
SMC4-224ENST00000494612 CFAP100Q494V2 611 aa6.27□□□□□ -1.41
SMC4-224ENST00000494612 ABHD17CQ6PCB6 329 aa6.27□□□□□ -1.41
SMC4-224ENST00000494612 TRIM48Q8IWZ4 208 aa6.27□□□□□ -1.41
SMC4-224ENST00000494612 DTX3Q8N9I9 347 aa6.27□□□□□ -1.41
SMC4-224ENST00000494612 PCDH19Q8TAB3 1148 aa6.27□□□□□ -1.41
SMC4-224ENST00000494612 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.27□□□□□ -1.41
SMC4-224ENST00000494612 Q8TCH9 128 aa6.27□□□□□ -1.41
SMC4-224ENST00000494612 FAM126AQ9BYI3 521 aaPredicted RBP6.27□□□□□ -1.41
SMC4-224ENST00000494612 SEMA4AQ9H3S1 761 aa6.27□□□□□ -1.41
SMC4-224ENST00000494612 JADE2Q9NQC1 790 aa6.27□□□□□ -1.41
SMC4-224ENST00000494612 TESMINQ9Y4I5 508 aa6.27□□□□□ -1.41
SMC4-224ENST00000494612 MUSKO15146 869 aa6.26□□□□□ -1.41
SMC4-224ENST00000494612 PPM1GO15355 546 aaPredicted RBP6.26□□□□□ -1.41
SMC4-224ENST00000494612 KCNQ2O43526 872 aa6.26□□□□□ -1.41
SMC4-224ENST00000494612 MAFKO60675 156 aa6.26□□□□□ -1.41
SMC4-224ENST00000494612 KNG1P01042 644 aa6.26□□□□□ -1.41
SMC4-224ENST00000494612 ASLP04424 464 aa6.26□□□□□ -1.41
SMC4-224ENST00000494612 CHGBP05060 677 aa6.26□□□□□ -1.41
SMC4-224ENST00000494612 PYGMP11217 842 aa6.26□□□□□ -1.41
SMC4-224ENST00000494612 KCNA6P17658 529 aa6.26□□□□□ -1.41
SMC4-224ENST00000494612 IGFALSP35858 605 aa6.26□□□□□ -1.41
SMC4-224ENST00000494612 SELENOPP49908 381 aa6.26□□□□□ -1.41
SMC4-224ENST00000494612 PAK1Q13153 545 aa6.26□□□□□ -1.41
SMC4-224ENST00000494612 CT47A1Q5JQC4 288 aaPredicted RBP6.26□□□□□ -1.41
SMC4-224ENST00000494612 PIK3R6Q5UE93 754 aa6.26□□□□□ -1.41
SMC4-224ENST00000494612 CDCA2Q69YH5 1023 aaPredicted RBP6.26□□□□□ -1.41
SMC4-224ENST00000494612 THNSL2Q86YJ6 484 aa6.26□□□□□ -1.41
SMC4-224ENST00000494612 IGSF22Q8N9C0 903 aa6.26□□□□□ -1.41
SMC4-224ENST00000494612 PIP4K2CQ8TBX8 421 aa6.26□□□□□ -1.41
SMC4-224ENST00000494612 ZFYVE21Q9BQ24 234 aa6.26□□□□□ -1.41
SMC4-224ENST00000494612 WDR26Q9H7D7 661 aa6.26□□□□□ -1.41
SMC4-224ENST00000494612 CATSPERZQ9NTU4 200 aa6.26□□□□□ -1.41
SMC4-224ENST00000494612 SAMD15Q9P1V8 674 aa6.26□□□□□ -1.41
SMC4-224ENST00000494612 PRKAB1Q9Y478 270 aa6.26□□□□□ -1.41
SMC4-224ENST00000494612 GSG1L2A8MUP6 293 aa6.25□□□□□ -1.41
SMC4-224ENST00000494612 KRIT1O00522 736 aa6.25□□□□□ -1.41
SMC4-224ENST00000494612 KCNK3O14649 394 aa6.25□□□□□ -1.41
SMC4-224ENST00000494612 SLC27A2O14975 620 aa6.25□□□□□ -1.41
SMC4-224ENST00000494612 CNOT4O95628 575 aaKnown RBP6.25□□□□□ -1.41
SMC4-224ENST00000494612 GRK2P25098 689 aa6.25□□□□□ -1.41
SMC4-224ENST00000494612 GRK3P35626 688 aa6.25□□□□□ -1.41
SMC4-224ENST00000494612 ST5P78524 1137 aa6.25□□□□□ -1.41
SMC4-224ENST00000494612 KIZQ2M2Z5 673 aa6.25□□□□□ -1.41
SMC4-224ENST00000494612 PHF19Q5T6S3 580 aa6.25□□□□□ -1.41
SMC4-224ENST00000494612 Q6ZUG5 572 aa6.25□□□□□ -1.41
SMC4-224ENST00000494612 CISD2Q8N5K1 135 aaKnown RBP6.25□□□□□ -1.41
SMC4-224ENST00000494612 AJUBAQ96IF1 538 aa6.25□□□□□ -1.41
SMC4-224ENST00000494612 SEC61A2Q9H9S3 476 aa6.25□□□□□ -1.41
SMC4-224ENST00000494612 DLL4Q9NR61 685 aa6.25□□□□□ -1.41
SMC4-224ENST00000494612 COL4A3BPQ9Y5P4 624 aa6.25□□□□□ -1.41
SMC4-224ENST00000494612 FAM83GA6ND36 823 aa6.24□□□□□ -1.41
SMC4-224ENST00000494612 FAM47E-STBD1D6RA91 191 aa6.24□□□□□ -1.41
SMC4-224ENST00000494612 M0R2C6 588 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms