RNA–Protein interactions for RNA: ENST00000494571.1

ATG3-207, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 2,758 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-207ENST00000494571 TIPINQ9BVW5 301 aa4.37□□□□□ -1.71
ATG3-207ENST00000494571 TMBIM4Q9HC24 238 aa4.37□□□□□ -1.71
ATG3-207ENST00000494571 NCOA5Q9HCD5 579 aaKnown RBP4.37□□□□□ -1.71
ATG3-207ENST00000494571 RBM12Q9NTZ6 932 aaKnown RBP4.37□□□□□ -1.71
ATG3-207ENST00000494571 TCP11L1Q9NUJ3 509 aa4.37□□□□□ -1.71
ATG3-207ENST00000494571 WWC3Q9ULE0 1092 aa4.37□□□□□ -1.71
ATG3-207ENST00000494571 PCDHA5Q9Y5H7 936 aa4.37□□□□□ -1.71
ATG3-207ENST00000494571 EID1Q9Y6B2 187 aa4.37□□□□□ -1.71
ATG3-207ENST00000494571 AFF2P51816 1311 aa4.37□□□□□ -1.71
ATG3-207ENST00000494571 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.37□□□□□ -1.71
ATG3-207ENST00000494571 NPHP4O75161 1426 aaPredicted RBP4.37□□□□□ -1.71
ATG3-207ENST00000494571 TROQ12816 1431 aaPredicted RBP4.37□□□□□ -1.71
ATG3-207ENST00000494571 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.37□□□□□ -1.71
ATG3-207ENST00000494571 C5orf60A6NFR6 353 aa4.37□□□□□ -1.71
ATG3-207ENST00000494571 A6NL46 340 aa4.37□□□□□ -1.71
ATG3-207ENST00000494571 RGL2O15211 777 aa4.37□□□□□ -1.71
ATG3-207ENST00000494571 SPTLC2O15270 562 aa4.37□□□□□ -1.71
ATG3-207ENST00000494571 SH3BP5O60239 455 aa4.37□□□□□ -1.71
ATG3-207ENST00000494571 TMCC2O75069 709 aa4.37□□□□□ -1.71
ATG3-207ENST00000494571 GIGYF1O75420 1035 aaPredicted RBP4.37□□□□□ -1.71
ATG3-207ENST00000494571 HMOX1P09601 288 aa4.37□□□□□ -1.71
ATG3-207ENST00000494571 CHN1P15882 459 aa4.37□□□□□ -1.71
ATG3-207ENST00000494571 GM2AP17900 193 aa4.37□□□□□ -1.71
ATG3-207ENST00000494571 FBLN1P23142 703 aa4.37□□□□□ -1.71
ATG3-207ENST00000494571 PSMA5P28066 241 aa4.37□□□□□ -1.71
ATG3-207ENST00000494571 IARSP41252 1262 aaKnown RBP4.37□□□□□ -1.71
ATG3-207ENST00000494571 PAFAH1B1P43034 410 aa4.37□□□□□ -1.71
ATG3-207ENST00000494571 MSLNQ13421 630 aaPredicted RBP4.37□□□□□ -1.71
ATG3-207ENST00000494571 ACAP1Q15027 740 aa4.37□□□□□ -1.71
ATG3-207ENST00000494571 LRRC14Q15048 493 aa4.37□□□□□ -1.71
ATG3-207ENST00000494571 CCDC153Q494R4 210 aa4.37□□□□□ -1.71
ATG3-207ENST00000494571 ZCWPW2Q504Y3 356 aa4.37□□□□□ -1.71
ATG3-207ENST00000494571 WDR45BQ5MNZ6 344 aa4.37□□□□□ -1.71
ATG3-207ENST00000494571 SNX30Q5VWJ9 437 aa4.37□□□□□ -1.71
ATG3-207ENST00000494571 TBC1D9BQ66K14 1250 aa4.37□□□□□ -1.71
ATG3-207ENST00000494571 KLHL35Q6PF15 583 aa4.37□□□□□ -1.71
ATG3-207ENST00000494571 VASH1Q7L8A9 365 aaPredicted RBP4.37□□□□□ -1.71
ATG3-207ENST00000494571 SATL1Q86VE3 508 aa4.37□□□□□ -1.71
ATG3-207ENST00000494571 CNGA4Q8IV77 575 aa4.37□□□□□ -1.71
ATG3-207ENST00000494571 KLHL7Q8IXQ5 586 aa4.37□□□□□ -1.71
ATG3-207ENST00000494571 GRAMD1CQ8IYS0 662 aa4.37□□□□□ -1.71
ATG3-207ENST00000494571 RBM46Q8TBY0 533 aaKnown RBP4.37□□□□□ -1.71
ATG3-207ENST00000494571 ASAP3Q8TDY4 903 aa4.37□□□□□ -1.71
ATG3-207ENST00000494571 APPBP2Q92624 585 aa4.37□□□□□ -1.71
ATG3-207ENST00000494571 ARHGEF2Q92974 986 aaKnown RBP4.37□□□□□ -1.71
ATG3-207ENST00000494571 MS4A14Q96JA4 679 aa4.37□□□□□ -1.71
ATG3-207ENST00000494571 FERD3LQ96RJ6 166 aa4.37□□□□□ -1.71
ATG3-207ENST00000494571 VPS16Q9H269 839 aa4.37□□□□□ -1.71
ATG3-207ENST00000494571 PALMDQ9NP74 551 aa4.37□□□□□ -1.71
ATG3-207ENST00000494571 CYP39A1Q9NYL5 469 aa4.37□□□□□ -1.71
ATG3-207ENST00000494571 FAM32AQ9Y421 112 aaKnown RBP4.37□□□□□ -1.71
ATG3-207ENST00000494571 EPN1Q9Y6I3 576 aaPredicted RBP4.37□□□□□ -1.71
ATG3-207ENST00000494571 DCCP43146 1447 aa4.37□□□□□ -1.71
ATG3-207ENST00000494571 NSD3Q9BZ95 1437 aa4.37□□□□□ -1.71
ATG3-207ENST00000494571 ATP10DQ9P241 1426 aa4.37□□□□□ -1.71
ATG3-207ENST00000494571 PTPDC1A2A3K4 754 aa4.36□□□□□ -1.71
ATG3-207ENST00000494571 WDR91A4D1P6 747 aa4.36□□□□□ -1.71
ATG3-207ENST00000494571 GOLGA8IPA6NC78 632 aa4.36□□□□□ -1.71
ATG3-207ENST00000494571 RNF225M0QZC1 329 aaPredicted RBP4.36□□□□□ -1.71
ATG3-207ENST00000494571 NDUFA10O95299 355 aa4.36□□□□□ -1.71
ATG3-207ENST00000494571 PGM3O95394 542 aa4.36□□□□□ -1.71
ATG3-207ENST00000494571 ZBTB11O95625 1053 aaPredicted RBP4.36□□□□□ -1.71
ATG3-207ENST00000494571 BAG3O95817 575 aa4.36□□□□□ -1.71
ATG3-207ENST00000494571 GYPCP04921 128 aa4.36□□□□□ -1.71
ATG3-207ENST00000494571 LYNP07948 512 aa4.36□□□□□ -1.71
ATG3-207ENST00000494571 VDRP11473 427 aa4.36□□□□□ -1.71
ATG3-207ENST00000494571 IDO1P14902 403 aa4.36□□□□□ -1.71
ATG3-207ENST00000494571 PRKACBP22694 351 aa4.36□□□□□ -1.71
ATG3-207ENST00000494571 S100A1P23297 94 aa4.36□□□□□ -1.71
ATG3-207ENST00000494571 TARSP26639 723 aaKnown RBP4.36□□□□□ -1.71
ATG3-207ENST00000494571 NEK3P51956 506 aa4.36□□□□□ -1.71
ATG3-207ENST00000494571 CCNG1P51959 295 aa4.36□□□□□ -1.71
ATG3-207ENST00000494571 BNIP1Q12981 228 aa4.36□□□□□ -1.71
ATG3-207ENST00000494571 DCTN2Q13561 401 aaKnown RBP4.36□□□□□ -1.71
ATG3-207ENST00000494571 TOB2Q14106 344 aaPredicted RBP4.36□□□□□ -1.71
ATG3-207ENST00000494571 ARHGEF6Q15052 776 aa4.36□□□□□ -1.71
ATG3-207ENST00000494571 CTC1Q2NKJ3 1217 aa4.36□□□□□ -1.71
ATG3-207ENST00000494571 SLC9C2Q5TAH2 1124 aa4.36□□□□□ -1.71
ATG3-207ENST00000494571 UTS2BQ765I0 119 aa4.36□□□□□ -1.71
ATG3-207ENST00000494571 UBE3BQ7Z3V4 1068 aa4.36□□□□□ -1.71
ATG3-207ENST00000494571 HDGFL2Q7Z4V5 671 aaPredicted RBP4.36□□□□□ -1.71
ATG3-207ENST00000494571 PATL1Q86TB9 770 aaKnown RBP4.36□□□□□ -1.71
ATG3-207ENST00000494571 VSIG1Q86XK7 387 aa4.36□□□□□ -1.71
ATG3-207ENST00000494571 DDX42Q86XP3 938 aaKnown RBP eCLIP4.36□□□□□ -1.71
ATG3-207ENST00000494571 NUTM2AQ8IVF1 878 aaPredicted RBP4.36□□□□□ -1.71
ATG3-207ENST00000494571 BRSK2Q8IWQ3 736 aa4.36□□□□□ -1.71
ATG3-207ENST00000494571 FAM20CQ8IXL6 584 aa4.36□□□□□ -1.71
ATG3-207ENST00000494571 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.36□□□□□ -1.71
ATG3-207ENST00000494571 CAVIN3Q969G5 261 aa4.36□□□□□ -1.71
ATG3-207ENST00000494571 FAM136AQ96C01 138 aa4.36□□□□□ -1.71
ATG3-207ENST00000494571 VMP1Q96GC9 406 aa4.36□□□□□ -1.71
ATG3-207ENST00000494571 VPS50Q96JG6 964 aa4.36□□□□□ -1.71
ATG3-207ENST00000494571 ZNF333Q96JL9 665 aa4.36□□□□□ -1.71
ATG3-207ENST00000494571 NSMCE3Q96MG7 304 aa4.36□□□□□ -1.71
ATG3-207ENST00000494571 PPP1R10Q96QC0 940 aaKnown RBP4.36□□□□□ -1.71
ATG3-207ENST00000494571 RAB3IPQ96QF0 476 aaPredicted RBP4.36□□□□□ -1.71
ATG3-207ENST00000494571 KRT12Q99456 494 aa4.36□□□□□ -1.71
ATG3-207ENST00000494571 ERP44Q9BS26 406 aa4.36□□□□□ -1.71
ATG3-207ENST00000494571 SEZ6LQ9BYH1 1024 aa4.36□□□□□ -1.71
ATG3-207ENST00000494571 KRT23Q9C075 422 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms