RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 MTUS1Q9ULD2 1270 aa9.72□□□□□ -0.85
LRCH3-219ENST00000494069 CYP46A1Q9Y6A2 500 aa9.72□□□□□ -0.85
LRCH3-219ENST00000494069 MTCH2Q9Y6C9 303 aa9.72□□□□□ -0.85
LRCH3-219ENST00000494069 EMSYQ7Z589 1322 aa9.72□□□□□ -0.85
LRCH3-219ENST00000494069 IGKV6D-21A0A0A0MT36 114 aa9.71□□□□□ -0.86
LRCH3-219ENST00000494069 LINC01553A4QN01 128 aa9.71□□□□□ -0.86
LRCH3-219ENST00000494069 EPB41L2O43491 1005 aaKnown RBP9.71□□□□□ -0.86
LRCH3-219ENST00000494069 LPXNO60711 386 aa9.71□□□□□ -0.86
LRCH3-219ENST00000494069 CAND2O75155 1236 aa9.71□□□□□ -0.86
LRCH3-219ENST00000494069 UPP2O95045 317 aa9.71□□□□□ -0.86
LRCH3-219ENST00000494069 AMHP03971 560 aa9.71□□□□□ -0.86
LRCH3-219ENST00000494069 ATP4AP20648 1035 aa9.71□□□□□ -0.86
LRCH3-219ENST00000494069 NLRP5P59047 1200 aa9.71□□□□□ -0.86
LRCH3-219ENST00000494069 PLCB2Q00722 1185 aa9.71□□□□□ -0.86
LRCH3-219ENST00000494069 TMEM62Q0P6H9 643 aa9.71□□□□□ -0.86
LRCH3-219ENST00000494069 LPIN1Q14693 890 aa9.71□□□□□ -0.86
LRCH3-219ENST00000494069 PRR16Q569H4 304 aa9.71□□□□□ -0.86
LRCH3-219ENST00000494069 ABHD15Q6UXT9 468 aa9.71□□□□□ -0.86
LRCH3-219ENST00000494069 NIPA1Q7RTP0 329 aa9.71□□□□□ -0.86
LRCH3-219ENST00000494069 PLPPR4Q7Z2D5 763 aa9.71□□□□□ -0.86
LRCH3-219ENST00000494069 RPAINQ86UA6 219 aa9.71□□□□□ -0.86
LRCH3-219ENST00000494069 CCDC60Q8IWA6 550 aaPredicted RBP9.71□□□□□ -0.86
LRCH3-219ENST00000494069 TEX2Q8IWB9 1127 aa9.71□□□□□ -0.86
LRCH3-219ENST00000494069 GDPD5Q8WTR4 605 aa9.71□□□□□ -0.86
LRCH3-219ENST00000494069 GJA10Q969M2 543 aa9.71□□□□□ -0.86
LRCH3-219ENST00000494069 LENG9Q96B70 501 aa9.71□□□□□ -0.86
LRCH3-219ENST00000494069 IFIH1Q9BYX4 1025 aaKnown RBP9.71□□□□□ -0.86
LRCH3-219ENST00000494069 AZI2Q9H6S1 392 aa9.71□□□□□ -0.86
LRCH3-219ENST00000494069 AGO3Q9H9G7 860 aaKnown RBP9.71□□□□□ -0.86
LRCH3-219ENST00000494069 CDY2AQ9Y6F7 541 aa9.71□□□□□ -0.86
LRCH3-219ENST00000494069 PRRC2BQ5JSZ5 2229 aaKnown RBP9.71□□□□□ -0.86
LRCH3-219ENST00000494069 TRANK1O15050 2925 aa9.7□□□□□ -0.86
LRCH3-219ENST00000494069 POTEB3A0JP26 581 aa9.7□□□□□ -0.86
LRCH3-219ENST00000494069 IPO5O00410 1097 aaKnown RBP9.7□□□□□ -0.86
LRCH3-219ENST00000494069 BACH1O14867 736 aa9.7□□□□□ -0.86
LRCH3-219ENST00000494069 EFCAB14O75071 495 aa9.7□□□□□ -0.86
LRCH3-219ENST00000494069 GNA11P29992 359 aa9.7□□□□□ -0.86
LRCH3-219ENST00000494069 CIITAP33076 1130 aa9.7□□□□□ -0.86
LRCH3-219ENST00000494069 SSRP1Q08945 709 aaKnown RBP9.7□□□□□ -0.86
LRCH3-219ENST00000494069 SCRN1Q12765 414 aa9.7□□□□□ -0.86
LRCH3-219ENST00000494069 NPY5RQ15761 445 aa9.7□□□□□ -0.86
LRCH3-219ENST00000494069 FBXO47Q5MNV8 452 aa9.7□□□□□ -0.86
LRCH3-219ENST00000494069 SWSAP1Q6NVH7 229 aa9.7□□□□□ -0.86
LRCH3-219ENST00000494069 TAF2Q6P1X5 1199 aa9.7□□□□□ -0.86
LRCH3-219ENST00000494069 POTEBQ6S5H4 581 aa9.7□□□□□ -0.86
LRCH3-219ENST00000494069 TRMT1LQ7Z2T5 733 aaKnown RBP9.7□□□□□ -0.86
LRCH3-219ENST00000494069 CCDC12Q8WUD4 166 aaPredicted RBP9.7□□□□□ -0.86
LRCH3-219ENST00000494069 ZNF274Q96GC6 653 aaPredicted RBP9.7□□□□□ -0.86
LRCH3-219ENST00000494069 C17orf80Q9BSJ5 609 aa9.7□□□□□ -0.86
LRCH3-219ENST00000494069 ZNF577Q9BSK1 485 aa9.7□□□□□ -0.86
LRCH3-219ENST00000494069 SUGCTQ9HAC7 445 aa9.7□□□□□ -0.86
LRCH3-219ENST00000494069 GJB4Q9NTQ9 266 aa9.7□□□□□ -0.86
LRCH3-219ENST00000494069 TPCN1Q9ULQ1 816 aa9.7□□□□□ -0.86
LRCH3-219ENST00000494069 MICAL3Q7RTP6 2002 aa9.7□□□□□ -0.86
LRCH3-219ENST00000494069 KAT6AQ92794 2004 aa9.7□□□□□ -0.86
LRCH3-219ENST00000494069 XIRP2A4UGR9 3374 aa9.69□□□□□ -0.86
LRCH3-219ENST00000494069 RRN3P2A6NIE6 340 aa9.69□□□□□ -0.86
LRCH3-219ENST00000494069 ZBTB42B2RXF5 422 aa9.69□□□□□ -0.86
LRCH3-219ENST00000494069 M0R2N6 131 aa9.69□□□□□ -0.86
LRCH3-219ENST00000494069 MSH4O15457 936 aa9.69□□□□□ -0.86
LRCH3-219ENST00000494069 SIP14410 1827 aa9.69□□□□□ -0.86
LRCH3-219ENST00000494069 KLRC1P26715 233 aa9.69□□□□□ -0.86
LRCH3-219ENST00000494069 CD52P31358 61 aa9.69□□□□□ -0.86
LRCH3-219ENST00000494069 ERVK-21P61565 698 aa9.69□□□□□ -0.86
LRCH3-219ENST00000494069 MRPS6P82932 125 aaKnown RBP9.69□□□□□ -0.86
LRCH3-219ENST00000494069 HTRA4P83105 476 aaPredicted RBP9.69□□□□□ -0.86
LRCH3-219ENST00000494069 TFF2Q03403 129 aa9.69□□□□□ -0.86
LRCH3-219ENST00000494069 PDXDC2PQ6P474 469 aa9.69□□□□□ -0.86
LRCH3-219ENST00000494069 MTHFD1LQ6UB35 978 aa9.69□□□□□ -0.86
LRCH3-219ENST00000494069 RTN4RL1Q86UN2 441 aaPredicted RBP9.69□□□□□ -0.86
LRCH3-219ENST00000494069 CUL9Q8IWT3 2517 aa9.69□□□□□ -0.86
LRCH3-219ENST00000494069 CCDC148Q8NFR7 591 aa9.69□□□□□ -0.86
LRCH3-219ENST00000494069 LINC01599Q8WXQ3 324 aa9.69□□□□□ -0.86
LRCH3-219ENST00000494069 TOP1MTQ969P6 601 aa9.69□□□□□ -0.86
LRCH3-219ENST00000494069 TGS1Q96RS0 853 aaKnown RBP9.69□□□□□ -0.86
LRCH3-219ENST00000494069 OCEL1Q9H607 264 aa9.69□□□□□ -0.86
LRCH3-219ENST00000494069 CDHR5Q9HBB8 845 aa9.69□□□□□ -0.86
LRCH3-219ENST00000494069 ZNF302Q9NR11 478 aa9.69□□□□□ -0.86
LRCH3-219ENST00000494069 KCNJ14Q9UNX9 436 aa9.69□□□□□ -0.86
LRCH3-219ENST00000494069 INSL6Q9Y581 213 aa9.69□□□□□ -0.86
LRCH3-219ENST00000494069 PCDHA2Q9Y5H9 948 aa9.69□□□□□ -0.86
LRCH3-219ENST00000494069 ENPP3O14638 875 aa9.68□□□□□ -0.86
LRCH3-219ENST00000494069 CPLX1O14810 134 aa9.68□□□□□ -0.86
LRCH3-219ENST00000494069 HBP1O60381 514 aa9.68□□□□□ -0.86
LRCH3-219ENST00000494069 CTDNEP1O95476 244 aa9.68□□□□□ -0.86
LRCH3-219ENST00000494069 TDP2O95551 362 aa9.68□□□□□ -0.86
LRCH3-219ENST00000494069 POU3F3P20264 500 aaPredicted RBP9.68□□□□□ -0.86
LRCH3-219ENST00000494069 SKIV2LQ15477 1246 aaKnown RBP9.68□□□□□ -0.86
LRCH3-219ENST00000494069 TMEM266Q2M3C6 531 aa9.68□□□□□ -0.86
LRCH3-219ENST00000494069 MIS18BP1Q6P0N0 1132 aa9.68□□□□□ -0.86
LRCH3-219ENST00000494069 RSPH3Q86UC2 560 aa9.68□□□□□ -0.86
LRCH3-219ENST00000494069 TRIM22Q8IYM9 498 aa9.68□□□□□ -0.86
LRCH3-219ENST00000494069 NECAB1Q8N987 351 aa9.68□□□□□ -0.86
LRCH3-219ENST00000494069 BICD2Q8TD16 824 aa9.68□□□□□ -0.86
LRCH3-219ENST00000494069 TBCKQ8TEA7 893 aa9.68□□□□□ -0.86
LRCH3-219ENST00000494069 ATP8B4Q8TF62 1192 aa9.68□□□□□ -0.86
LRCH3-219ENST00000494069 ASB2Q96Q27 587 aa9.68□□□□□ -0.86
LRCH3-219ENST00000494069 PPP1R16BQ96T49 567 aa9.68□□□□□ -0.86
LRCH3-219ENST00000494069 YME1L1Q96TA2 773 aa9.68□□□□□ -0.86
LRCH3-219ENST00000494069 SH3GLB2Q9NR46 395 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms