RNA–Protein interactions for RNA: ENST00000494054.1

UFD1-210, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-210ENST00000494054 NLRP5P59047 1200 aa11.08□□□□□ -0.64
UFD1-210ENST00000494054 TFF2Q03403 129 aa11.08□□□□□ -0.64
UFD1-210ENST00000494054 SSRP1Q08945 709 aaKnown RBP11.08□□□□□ -0.64
UFD1-210ENST00000494054 MTHFD1LQ6UB35 978 aa11.08□□□□□ -0.64
UFD1-210ENST00000494054 CCDC148Q8NFR7 591 aa11.08□□□□□ -0.64
UFD1-210ENST00000494054 BICD2Q8TD16 824 aa11.08□□□□□ -0.64
UFD1-210ENST00000494054 ATP8B4Q8TF62 1192 aa11.08□□□□□ -0.64
UFD1-210ENST00000494054 AIFM3Q96NN9 605 aa11.08□□□□□ -0.64
UFD1-210ENST00000494054 ASB2Q96Q27 587 aa11.08□□□□□ -0.64
UFD1-210ENST00000494054 ZNF577Q9BSK1 485 aa11.08□□□□□ -0.64
UFD1-210ENST00000494054 ZNF302Q9NR11 478 aa11.08□□□□□ -0.64
UFD1-210ENST00000494054 SH3GLB2Q9NR46 395 aa11.08□□□□□ -0.64
UFD1-210ENST00000494054 TBC1D22BQ9NU19 505 aa11.08□□□□□ -0.64
UFD1-210ENST00000494054 PRUNE2Q8WUY3 3088 aa11.07□□□□□ -0.64
UFD1-210ENST00000494054 SMIM35A0A1B0GVV1 85 aa11.07□□□□□ -0.64
UFD1-210ENST00000494054 ZBTB42B2RXF5 422 aa11.07□□□□□ -0.64
UFD1-210ENST00000494054 CPLX1O14810 134 aa11.07□□□□□ -0.64
UFD1-210ENST00000494054 KLRC1P26715 233 aa11.07□□□□□ -0.64
UFD1-210ENST00000494054 CD52P31358 61 aa11.07□□□□□ -0.64
UFD1-210ENST00000494054 SLC26A2P50443 739 aa11.07□□□□□ -0.64
UFD1-210ENST00000494054 MRPS5P82675 430 aaKnown RBP11.07□□□□□ -0.64
UFD1-210ENST00000494054 SETQ01105 290 aaPredicted RBP11.07□□□□□ -0.64
UFD1-210ENST00000494054 SKIV2LQ15477 1246 aaKnown RBP11.07□□□□□ -0.64
UFD1-210ENST00000494054 NPY5RQ15761 445 aa11.07□□□□□ -0.64
UFD1-210ENST00000494054 FAM160B1Q5W0V3 765 aa11.07□□□□□ -0.64
UFD1-210ENST00000494054 ZNF746Q6NUN9 644 aaPredicted RBP11.07□□□□□ -0.64
UFD1-210ENST00000494054 MIS18BP1Q6P0N0 1132 aa11.07□□□□□ -0.64
UFD1-210ENST00000494054 PDXDC2PQ6P474 469 aa11.07□□□□□ -0.64
UFD1-210ENST00000494054 RTN4RL1Q86UN2 441 aaPredicted RBP11.07□□□□□ -0.64
UFD1-210ENST00000494054 TRIM22Q8IYM9 498 aa11.07□□□□□ -0.64
UFD1-210ENST00000494054 LINC01599Q8WXQ3 324 aa11.07□□□□□ -0.64
UFD1-210ENST00000494054 SYMPKQ92797 1274 aaKnown RBP11.07□□□□□ -0.64
UFD1-210ENST00000494054 TNPO1Q92973 898 aaKnown RBP11.07□□□□□ -0.64
UFD1-210ENST00000494054 GJA10Q969M2 543 aa11.07□□□□□ -0.64
UFD1-210ENST00000494054 YME1L1Q96TA2 773 aa11.07□□□□□ -0.64
UFD1-210ENST00000494054 CDHR5Q9HBB8 845 aa11.07□□□□□ -0.64
UFD1-210ENST00000494054 PCDHA4Q9UN74 947 aa11.07□□□□□ -0.64
UFD1-210ENST00000494054 MAFBQ9Y5Q3 323 aaPredicted RBP11.07□□□□□ -0.64
UFD1-210ENST00000494054 TRPV2Q9Y5S1 764 aa11.07□□□□□ -0.64
UFD1-210ENST00000494054 COL4A4P53420 1690 aaPredicted RBP11.07□□□□□ -0.64
UFD1-210ENST00000494054 VCANP13611 3396 aa11.07□□□□□ -0.64
UFD1-210ENST00000494054 M0R2N6 131 aa11.06□□□□□ -0.64
UFD1-210ENST00000494054 MSH4O15457 936 aa11.06□□□□□ -0.64
UFD1-210ENST00000494054 HBP1O60381 514 aa11.06□□□□□ -0.64
UFD1-210ENST00000494054 DEXIO95424 95 aa11.06□□□□□ -0.64
UFD1-210ENST00000494054 USP11P51784 963 aa11.06□□□□□ -0.64
UFD1-210ENST00000494054 SCRN1Q12765 414 aa11.06□□□□□ -0.64
UFD1-210ENST00000494054 IER5Q5VY09 327 aa11.06□□□□□ -0.64
UFD1-210ENST00000494054 ERICH6BQ5W0A0 696 aa11.06□□□□□ -0.64
UFD1-210ENST00000494054 TSHZ1Q6ZSZ6 1077 aa11.06□□□□□ -0.64
UFD1-210ENST00000494054 TRMT1LQ7Z2T5 733 aaKnown RBP11.06□□□□□ -0.64
UFD1-210ENST00000494054 KIAA0319LQ8IZA0 1049 aa11.06□□□□□ -0.64
UFD1-210ENST00000494054 TBCKQ8TEA7 893 aa11.06□□□□□ -0.64
UFD1-210ENST00000494054 CELF4Q9BZC1 486 aaKnown RBP11.06□□□□□ -0.64
UFD1-210ENST00000494054 TSPYL2Q9H2G4 693 aaPredicted RBP11.06□□□□□ -0.64
UFD1-210ENST00000494054 LMCD1Q9NZU5 365 aa11.06□□□□□ -0.64
UFD1-210ENST00000494054 GABBR1Q9UBS5 961 aa11.06□□□□□ -0.64
UFD1-210ENST00000494054 TPCN1Q9ULQ1 816 aa11.06□□□□□ -0.64
UFD1-210ENST00000494054 PADI3Q9ULW8 664 aa11.06□□□□□ -0.64
UFD1-210ENST00000494054 COL1A2P08123 1366 aa11.05□□□□□ -0.64
UFD1-210ENST00000494054 TRANK1O15050 2925 aa11.05□□□□□ -0.64
UFD1-210ENST00000494054 RPLP2P05387 115 aaKnown RBP11.05□□□□□ -0.64
UFD1-210ENST00000494054 PSAPP07602 524 aa11.05□□□□□ -0.64
UFD1-210ENST00000494054 BMP1P13497 986 aa11.05□□□□□ -0.64
UFD1-210ENST00000494054 KRT76Q01546 638 aa11.05□□□□□ -0.64
UFD1-210ENST00000494054 EPC2Q52LR7 807 aa11.05□□□□□ -0.64
UFD1-210ENST00000494054 ZNF484Q5JVG2 852 aa11.05□□□□□ -0.64
UFD1-210ENST00000494054 CKAP2LQ8IYA6 745 aa11.05□□□□□ -0.64
UFD1-210ENST00000494054 SMAP1Q8IYB5 467 aaPredicted RBP11.05□□□□□ -0.64
UFD1-210ENST00000494054 BLIDQ8IZY5 108 aa11.05□□□□□ -0.64
UFD1-210ENST00000494054 NME8Q8N427 588 aa11.05□□□□□ -0.64
UFD1-210ENST00000494054 FBXO22Q8NEZ5 403 aa11.05□□□□□ -0.64
UFD1-210ENST00000494054 SLC5A5Q92911 643 aa11.05□□□□□ -0.64
UFD1-210ENST00000494054 IL17RAQ96F46 866 aa11.05□□□□□ -0.64
UFD1-210ENST00000494054 TMX1Q9H3N1 280 aa11.05□□□□□ -0.64
UFD1-210ENST00000494054 RC3H2Q9HBD1 1191 aaKnown RBP11.05□□□□□ -0.64
UFD1-210ENST00000494054 GJB4Q9NTQ9 266 aa11.05□□□□□ -0.64
UFD1-210ENST00000494054 KCNJ14Q9UNX9 436 aa11.05□□□□□ -0.64
UFD1-210ENST00000494054 PCDHA10Q9Y5I2 948 aa11.05□□□□□ -0.64
UFD1-210ENST00000494054 SQORQ9Y6N5 450 aa11.05□□□□□ -0.64
UFD1-210ENST00000494054 IGSF9BQ9UPX0 1349 aa11.05□□□□□ -0.64
UFD1-210ENST00000494054 KDM3AQ9Y4C1 1321 aa11.05□□□□□ -0.64
UFD1-210ENST00000494054 CYP3A7-CYP3A51PA0A087WV96 503 aa11.04□□□□□ -0.64
UFD1-210ENST00000494054 ZNF862O60290 1169 aa11.04□□□□□ -0.64
UFD1-210ENST00000494054 PFKFB2O60825 505 aa11.04□□□□□ -0.64
UFD1-210ENST00000494054 CTDNEP1O95476 244 aa11.04□□□□□ -0.64
UFD1-210ENST00000494054 TDP2O95551 362 aa11.04□□□□□ -0.64
UFD1-210ENST00000494054 C22orf31O95567 290 aa11.04□□□□□ -0.64
UFD1-210ENST00000494054 LINC00271P0C7V0 271 aa11.04□□□□□ -0.64
UFD1-210ENST00000494054 CYP3A7P24462 503 aa11.04□□□□□ -0.64
UFD1-210ENST00000494054 KCNQ1P51787 676 aa11.04□□□□□ -0.64
UFD1-210ENST00000494054 TMEM266Q2M3C6 531 aa11.04□□□□□ -0.64
UFD1-210ENST00000494054 Q4G0T1 1027 aa11.04□□□□□ -0.64
UFD1-210ENST00000494054 CPLX2Q6PUV4 134 aaKnown RBP11.04□□□□□ -0.64
UFD1-210ENST00000494054 TMEM192Q8IY95 271 aa11.04□□□□□ -0.64
UFD1-210ENST00000494054 CRIPAKQ8N1N5 446 aa11.04□□□□□ -0.64
UFD1-210ENST00000494054 FIBCD1Q8N539 461 aa11.04□□□□□ -0.64
UFD1-210ENST00000494054 DAGLBQ8NCG7 672 aa11.04□□□□□ -0.64
UFD1-210ENST00000494054 ADAMTS19Q8TE59 1207 aa11.04□□□□□ -0.64
UFD1-210ENST00000494054 TMEM40Q8WWA1 233 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms