RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 ZCCHC17Q9NP64 241 aaKnown RBP12.59□□□□□ -0.39
RFC4-214ENST00000494047 OLFML3Q9NRN5 406 aa12.59□□□□□ -0.39
RFC4-214ENST00000494047 EMILIN3Q9NT22 766 aa12.59□□□□□ -0.39
RFC4-214ENST00000494047 TYW1Q9NV66 732 aaKnown RBP12.59□□□□□ -0.39
RFC4-214ENST00000494047 ARMCX3Q9UH62 379 aaPredicted RBP12.59□□□□□ -0.39
RFC4-214ENST00000494047 ZBTB12Q9Y330 459 aaPredicted RBP12.59□□□□□ -0.39
RFC4-214ENST00000494047 CAPN6Q9Y6Q1 641 aa12.59□□□□□ -0.39
RFC4-214ENST00000494047 WTIPA6NIX2 430 aaPredicted RBP12.58□□□□□ -0.4
RFC4-214ENST00000494047 TMEM88BA6NKF7 163 aa12.58□□□□□ -0.4
RFC4-214ENST00000494047 SPDYE3A6NKU9 549 aa12.58□□□□□ -0.4
RFC4-214ENST00000494047 HMGB1P1B2RPK0 211 aaPredicted RBP12.58□□□□□ -0.4
RFC4-214ENST00000494047 MYO1CO00159 1063 aa12.58□□□□□ -0.4
RFC4-214ENST00000494047 EBAG9O00559 213 aa12.58□□□□□ -0.4
RFC4-214ENST00000494047 ZNF263O14978 683 aa12.58□□□□□ -0.4
RFC4-214ENST00000494047 ADAMTS3O15072 1205 aa12.58□□□□□ -0.4
RFC4-214ENST00000494047 COBLO75128 1261 aa12.58□□□□□ -0.4
RFC4-214ENST00000494047 AFPP02771 609 aaKnown RBP12.58□□□□□ -0.4
RFC4-214ENST00000494047 FERP16591 822 aa12.58□□□□□ -0.4
RFC4-214ENST00000494047 CIITAP33076 1130 aa12.58□□□□□ -0.4
RFC4-214ENST00000494047 USP8P40818 1118 aa12.58□□□□□ -0.4
RFC4-214ENST00000494047 MAGEA9P43362 315 aa12.58□□□□□ -0.4
RFC4-214ENST00000494047 CYP27A1Q02318 531 aa12.58□□□□□ -0.4
RFC4-214ENST00000494047 EVX2Q03828 476 aa12.58□□□□□ -0.4
RFC4-214ENST00000494047 ALCAMQ13740 583 aa12.58□□□□□ -0.4
RFC4-214ENST00000494047 MYBPC2Q14324 1141 aa12.58□□□□□ -0.4
RFC4-214ENST00000494047 HERC4Q5GLZ8 1057 aaPredicted RBP12.58□□□□□ -0.4
RFC4-214ENST00000494047 CFAP58Q5T655 872 aa12.58□□□□□ -0.4
RFC4-214ENST00000494047 MAP1SQ66K74 1059 aaPredicted RBP12.58□□□□□ -0.4
RFC4-214ENST00000494047 GPBP1Q86WP2 473 aa12.58□□□□□ -0.4
RFC4-214ENST00000494047 OGFOD1Q8N543 542 aa12.58□□□□□ -0.4
RFC4-214ENST00000494047 LRRC15Q8TF66 581 aa12.58□□□□□ -0.4
RFC4-214ENST00000494047 KLRG1Q96E93 195 aa12.58□□□□□ -0.4
RFC4-214ENST00000494047 GMCL1Q96IK5 515 aa12.58□□□□□ -0.4
RFC4-214ENST00000494047 SPAG5Q96R06 1193 aa12.58□□□□□ -0.4
RFC4-214ENST00000494047 POLR3CQ9BUI4 534 aaPredicted RBP12.58□□□□□ -0.4
RFC4-214ENST00000494047 LSM14BQ9BX40 385 aaKnown RBP12.58□□□□□ -0.4
RFC4-214ENST00000494047 AMNQ9BXJ7 453 aa12.58□□□□□ -0.4
RFC4-214ENST00000494047 ANO3Q9BYT9 981 aa12.58□□□□□ -0.4
RFC4-214ENST00000494047 VAT1LQ9HCJ6 419 aa12.58□□□□□ -0.4
RFC4-214ENST00000494047 GDF3Q9NR23 364 aa12.58□□□□□ -0.4
RFC4-214ENST00000494047 KCNQ5Q9NR82 932 aa12.58□□□□□ -0.4
RFC4-214ENST00000494047 CEP350Q5VT06 3117 aa12.58□□□□□ -0.4
RFC4-214ENST00000494047 RCCD1A6NED2 376 aa12.57□□□□□ -0.4
RFC4-214ENST00000494047 TBCAO75347 108 aaKnown RBP12.57□□□□□ -0.4
RFC4-214ENST00000494047 MOCS3O95396 460 aa12.57□□□□□ -0.4
RFC4-214ENST00000494047 ABL1P00519 1130 aa12.57□□□□□ -0.4
RFC4-214ENST00000494047 GGCXP38435 758 aa12.57□□□□□ -0.4
RFC4-214ENST00000494047 ZNF280AP59817 542 aaPredicted RBP12.57□□□□□ -0.4
RFC4-214ENST00000494047 C2orf54Q08AI8 447 aa12.57□□□□□ -0.4
RFC4-214ENST00000494047 ADAM9Q13443 819 aa12.57□□□□□ -0.4
RFC4-214ENST00000494047 KNOP1Q1ED39 458 aaKnown RBP12.57□□□□□ -0.4
RFC4-214ENST00000494047 MEI1Q5TIA1 1274 aa12.57□□□□□ -0.4
RFC4-214ENST00000494047 KLHDC7AQ5VTJ3 777 aa12.57□□□□□ -0.4
RFC4-214ENST00000494047 TMEM179Q6ZVK1 233 aa12.57□□□□□ -0.4
RFC4-214ENST00000494047 SND1Q7KZF4 910 aaKnown RBP eCLIP12.57□□□□□ -0.4
RFC4-214ENST00000494047 SYT2Q8N9I0 419 aaPredicted RBP12.57□□□□□ -0.4
RFC4-214ENST00000494047 ACTRT1Q8TDG2 376 aa12.57□□□□□ -0.4
RFC4-214ENST00000494047 HAS1Q92839 578 aa12.57□□□□□ -0.4
RFC4-214ENST00000494047 GMLQ99445 158 aa12.57□□□□□ -0.4
RFC4-214ENST00000494047 TLR10Q9BXR5 811 aa12.57□□□□□ -0.4
RFC4-214ENST00000494047 CAPS2Q9BXY5 557 aa12.57□□□□□ -0.4
RFC4-214ENST00000494047 FAM129AQ9BZQ8 928 aa12.57□□□□□ -0.4
RFC4-214ENST00000494047 KCTD10Q9H3F6 313 aa12.57□□□□□ -0.4
RFC4-214ENST00000494047 SLITRK6Q9H5Y7 841 aa12.57□□□□□ -0.4
RFC4-214ENST00000494047 TUFT1Q9NNX1 390 aa12.57□□□□□ -0.4
RFC4-214ENST00000494047 GGA2Q9UJY4 613 aa12.57□□□□□ -0.4
RFC4-214ENST00000494047 MTMR7Q9Y216 660 aa12.57□□□□□ -0.4
RFC4-214ENST00000494047 TRPM7Q96QT4 1865 aa12.57□□□□□ -0.4
RFC4-214ENST00000494047 MYH10P35580 1976 aa12.57□□□□□ -0.4
RFC4-214ENST00000494047 PIK3CDO00329 1044 aa12.56□□□□□ -0.4
RFC4-214ENST00000494047 SRGAP2O75044 1071 aa12.56□□□□□ -0.4
RFC4-214ENST00000494047 ERLIN2O94905 339 aa12.56□□□□□ -0.4
RFC4-214ENST00000494047 CYP3A4P08684 503 aa12.56□□□□□ -0.4
RFC4-214ENST00000494047 AKR1B1P15121 316 aa12.56□□□□□ -0.4
RFC4-214ENST00000494047 CYP11B2P19099 503 aa12.56□□□□□ -0.4
RFC4-214ENST00000494047 NR2F2P24468 414 aa12.56□□□□□ -0.4
RFC4-214ENST00000494047 SREBF1P36956 1147 aa12.56□□□□□ -0.4
RFC4-214ENST00000494047 SLC1A4P43007 532 aa12.56□□□□□ -0.4
RFC4-214ENST00000494047 KLK7P49862 253 aa12.56□□□□□ -0.4
RFC4-214ENST00000494047 IRX5P78411 483 aaPredicted RBP12.56□□□□□ -0.4
RFC4-214ENST00000494047 RAPGEF1Q13905 1077 aa12.56□□□□□ -0.4
RFC4-214ENST00000494047 RPS6KA1Q15418 735 aa12.56□□□□□ -0.4
RFC4-214ENST00000494047 EXOC3L4Q17RC7 722 aa12.56□□□□□ -0.4
RFC4-214ENST00000494047 DACT2Q5SW24 774 aa12.56□□□□□ -0.4
RFC4-214ENST00000494047 RUFY4Q6ZNE9 571 aa12.56□□□□□ -0.4
RFC4-214ENST00000494047 MAATS1Q7Z4T9 603 aa12.56□□□□□ -0.4
RFC4-214ENST00000494047 LRRC47Q8N1G4 583 aaKnown RBP12.56□□□□□ -0.4
RFC4-214ENST00000494047 NEK9Q8TD19 979 aa12.56□□□□□ -0.4
RFC4-214ENST00000494047 COA7Q96BR5 231 aa12.56□□□□□ -0.4
RFC4-214ENST00000494047 UBA5Q9GZZ9 404 aa12.56□□□□□ -0.4
RFC4-214ENST00000494047 EFCC1Q9HA90 598 aa12.56□□□□□ -0.4
RFC4-214ENST00000494047 TMEM260Q9NX78 707 aa12.56□□□□□ -0.4
RFC4-214ENST00000494047 PI4KBQ9UBF8 816 aa12.56□□□□□ -0.4
RFC4-214ENST00000494047 KIAA1024Q9UPX6 916 aa12.56□□□□□ -0.4
RFC4-214ENST00000494047 PCDHA2Q9Y5H9 948 aa12.56□□□□□ -0.4
RFC4-214ENST00000494047 FRMPD2Q68DX3 1309 aaPredicted RBP12.56□□□□□ -0.4
RFC4-214ENST00000494047 PGRMC1O00264 195 aaKnown RBP12.56□□□□□ -0.4
RFC4-214ENST00000494047 EIF3HO15372 352 aaKnown RBP eCLIP12.56□□□□□ -0.4
RFC4-214ENST00000494047 N4BP1O75113 896 aaKnown RBP12.56□□□□□ -0.4
RFC4-214ENST00000494047 SHMT1P34896 483 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms