RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 ZNF862O60290 1169 aa12.72□□□□□ -0.37
MCF2L-231ENST00000494043 SMC2O95347 1197 aa12.72□□□□□ -0.37
MCF2L-231ENST00000494043 SSBP05455 408 aaKnown RBP eCLIP12.72□□□□□ -0.37
MCF2L-231ENST00000494043 HOXD8P13378 290 aaPredicted RBP12.72□□□□□ -0.37
MCF2L-231ENST00000494043 PRKAR2AP13861 404 aaKnown RBP12.72□□□□□ -0.37
MCF2L-231ENST00000494043 CASP1P29466 404 aa12.72□□□□□ -0.37
MCF2L-231ENST00000494043 YWHABP31946 246 aaKnown RBP12.72□□□□□ -0.37
MCF2L-231ENST00000494043 SLC12A3P55017 1021 aa12.72□□□□□ -0.37
MCF2L-231ENST00000494043 ZNF445P59923 1031 aa12.72□□□□□ -0.37
MCF2L-231ENST00000494043 PRKCEQ02156 737 aa12.72□□□□□ -0.37
MCF2L-231ENST00000494043 CUL4BQ13620 913 aa12.72□□□□□ -0.37
MCF2L-231ENST00000494043 DHX8Q14562 1220 aaKnown RBP12.72□□□□□ -0.37
MCF2L-231ENST00000494043 MAP3K21Q5TCX8 1036 aa12.72□□□□□ -0.37
MCF2L-231ENST00000494043 TLK2Q86UE8 772 aa12.72□□□□□ -0.37
MCF2L-231ENST00000494043 GPBP1Q86WP2 473 aa12.72□□□□□ -0.37
MCF2L-231ENST00000494043 SYT2Q8N9I0 419 aaPredicted RBP12.72□□□□□ -0.37
MCF2L-231ENST00000494043 SLAIN1Q8ND83 568 aa12.72□□□□□ -0.37
MCF2L-231ENST00000494043 AFG1LQ8WV93 481 aa12.72□□□□□ -0.37
MCF2L-231ENST00000494043 LENG1Q96BZ8 264 aaPredicted RBP12.72□□□□□ -0.37
MCF2L-231ENST00000494043 C7orf25Q9BPX7 421 aa12.72□□□□□ -0.37
MCF2L-231ENST00000494043 TRIM9Q9C026 710 aa12.72□□□□□ -0.37
MCF2L-231ENST00000494043 LRRC27Q9C0I9 530 aa12.72□□□□□ -0.37
MCF2L-231ENST00000494043 BLZF1Q9H2G9 400 aa12.72□□□□□ -0.37
MCF2L-231ENST00000494043 BHMT2Q9H2M3 363 aa12.72□□□□□ -0.37
MCF2L-231ENST00000494043 AZI2Q9H6S1 392 aa12.72□□□□□ -0.37
MCF2L-231ENST00000494043 TUBE1Q9UJT0 475 aa12.72□□□□□ -0.37
MCF2L-231ENST00000494043 DBR1Q9UK59 544 aaKnown RBP12.72□□□□□ -0.37
MCF2L-231ENST00000494043 Q9Y3F1 56 aa12.72□□□□□ -0.37
MCF2L-231ENST00000494043 PCDHA5Q9Y5H7 936 aa12.72□□□□□ -0.37
MCF2L-231ENST00000494043 ARHGEF35A5YM69 484 aa12.71□□□□□ -0.37
MCF2L-231ENST00000494043 MYMKA6NI61 221 aa12.71□□□□□ -0.37
MCF2L-231ENST00000494043 SEPT4O43236 478 aa12.71□□□□□ -0.37
MCF2L-231ENST00000494043 DYNC1LI2O43237 492 aaPredicted RBP12.71□□□□□ -0.37
MCF2L-231ENST00000494043 STBD1O95210 358 aa12.71□□□□□ -0.37
MCF2L-231ENST00000494043 MMP3P08254 477 aa12.71□□□□□ -0.37
MCF2L-231ENST00000494043 XRCC6P12956 609 aaKnown RBP eCLIP12.71□□□□□ -0.37
MCF2L-231ENST00000494043 STAT5BP51692 787 aa12.71□□□□□ -0.37
MCF2L-231ENST00000494043 XKR3Q5GH77 459 aa12.71□□□□□ -0.37
MCF2L-231ENST00000494043 UTP14CQ5TAP6 766 aaKnown RBP12.71□□□□□ -0.37
MCF2L-231ENST00000494043 NT5DC1Q5TFE4 455 aa12.71□□□□□ -0.37
MCF2L-231ENST00000494043 CNNM4Q6P4Q7 775 aa12.71□□□□□ -0.37
MCF2L-231ENST00000494043 SPATA20Q8TB22 786 aa12.71□□□□□ -0.37
MCF2L-231ENST00000494043 SMARCE1Q969G3 411 aa12.71□□□□□ -0.37
MCF2L-231ENST00000494043 ANKEF1Q9NU02 776 aa12.71□□□□□ -0.37
MCF2L-231ENST00000494043 PTCH2Q9Y6C5 1203 aa12.71□□□□□ -0.37
MCF2L-231ENST00000494043 A6NJR5 290 aa12.7□□□□□ -0.38
MCF2L-231ENST00000494043 DUSP11O75319 330 aaKnown RBP12.7□□□□□ -0.38
MCF2L-231ENST00000494043 PPFIA4O75335 1185 aa12.7□□□□□ -0.38
MCF2L-231ENST00000494043 OATP04181 439 aa12.7□□□□□ -0.38
MCF2L-231ENST00000494043 INHAP05111 366 aa12.7□□□□□ -0.38
MCF2L-231ENST00000494043 LGALS2P05162 132 aa12.7□□□□□ -0.38
MCF2L-231ENST00000494043 HSPA8P11142 646 aaKnown RBP12.7□□□□□ -0.38
MCF2L-231ENST00000494043 CYP11B2P19099 503 aa12.7□□□□□ -0.38
MCF2L-231ENST00000494043 ATP4AP20648 1035 aa12.7□□□□□ -0.38
MCF2L-231ENST00000494043 CCND3P30281 292 aaPredicted RBP12.7□□□□□ -0.38
MCF2L-231ENST00000494043 GRK4P32298 578 aa12.7□□□□□ -0.38
MCF2L-231ENST00000494043 SARSP49591 514 aaKnown RBP12.7□□□□□ -0.38
MCF2L-231ENST00000494043 RARRES1P49788 294 aa12.7□□□□□ -0.38
MCF2L-231ENST00000494043 ASIC1P78348 528 aa12.7□□□□□ -0.38
MCF2L-231ENST00000494043 PLA2G4FQ68DD2 849 aa12.7□□□□□ -0.38
MCF2L-231ENST00000494043 LRSAM1Q6UWE0 723 aa12.7□□□□□ -0.38
MCF2L-231ENST00000494043 ANO5Q75V66 913 aa12.7□□□□□ -0.38
MCF2L-231ENST00000494043 OTUD6AQ7L8S5 288 aa12.7□□□□□ -0.38
MCF2L-231ENST00000494043 PLPPR4Q7Z2D5 763 aa12.7□□□□□ -0.38
MCF2L-231ENST00000494043 TRIM50Q86XT4 487 aa12.7□□□□□ -0.38
MCF2L-231ENST00000494043 DDX12PQ92771 950 aa12.7□□□□□ -0.38
MCF2L-231ENST00000494043 GLG1Q92896 1179 aa12.7□□□□□ -0.38
MCF2L-231ENST00000494043 FAM167AQ96KS9 214 aa12.7□□□□□ -0.38
MCF2L-231ENST00000494043 CCDC43Q96MW1 224 aaKnown RBP12.7□□□□□ -0.38
MCF2L-231ENST00000494043 GSDMAQ96QA5 445 aa12.7□□□□□ -0.38
MCF2L-231ENST00000494043 FUCA2Q9BTY2 467 aa12.7□□□□□ -0.38
MCF2L-231ENST00000494043 RUSC1Q9BVN2 902 aa12.7□□□□□ -0.38
MCF2L-231ENST00000494043 AP5M1Q9H0R1 490 aa12.7□□□□□ -0.38
MCF2L-231ENST00000494043 SMARCAD1Q9H4L7 1026 aa12.7□□□□□ -0.38
MCF2L-231ENST00000494043 SEPT9Q9UHD8 586 aaPredicted RBP12.7□□□□□ -0.38
MCF2L-231ENST00000494043 WDR81Q562E7 1941 aa12.69□□□□□ -0.38
MCF2L-231ENST00000494043 LOXHD1Q8IVV2 1947 aa12.69□□□□□ -0.38
MCF2L-231ENST00000494043 TMEM150BA6NC51 233 aa12.69□□□□□ -0.38
MCF2L-231ENST00000494043 KLRC4O43908 158 aa12.69□□□□□ -0.38
MCF2L-231ENST00000494043 RPN1P04843 607 aaKnown RBP12.69□□□□□ -0.38
MCF2L-231ENST00000494043 CCDC192P0DO97 292 aa12.69□□□□□ -0.38
MCF2L-231ENST00000494043 CNGA1P29973 690 aa12.69□□□□□ -0.38
MCF2L-231ENST00000494043 CPT1AP50416 773 aa12.69□□□□□ -0.38
MCF2L-231ENST00000494043 SLC26A2P50443 739 aa12.69□□□□□ -0.38
MCF2L-231ENST00000494043 TYRO3Q06418 890 aa12.69□□□□□ -0.38
MCF2L-231ENST00000494043 DGKDQ16760 1214 aa12.69□□□□□ -0.38
MCF2L-231ENST00000494043 BRDTQ58F21 947 aaPredicted RBP12.69□□□□□ -0.38
MCF2L-231ENST00000494043 ARSHQ5FYA8 562 aa12.69□□□□□ -0.38
MCF2L-231ENST00000494043 XKR9Q5GH70 373 aa12.69□□□□□ -0.38
MCF2L-231ENST00000494043 RINT1Q6NUQ1 792 aa12.69□□□□□ -0.38
MCF2L-231ENST00000494043 PADI6Q6TGC4 694 aa12.69□□□□□ -0.38
MCF2L-231ENST00000494043 SASS6Q6UVJ0 657 aa12.69□□□□□ -0.38
MCF2L-231ENST00000494043 C1orf186Q6ZWK4 172 aa12.69□□□□□ -0.38
MCF2L-231ENST00000494043 DNAJC19Q96DA6 116 aa12.69□□□□□ -0.38
MCF2L-231ENST00000494043 UPF3AQ9H1J1 476 aaKnown RBP12.69□□□□□ -0.38
MCF2L-231ENST00000494043 BMP2KQ9NSY1 1161 aaPredicted RBP12.69□□□□□ -0.38
MCF2L-231ENST00000494043 RMND1Q9NWS8 449 aa12.69□□□□□ -0.38
MCF2L-231ENST00000494043 KCND2Q9NZV8 630 aa12.69□□□□□ -0.38
MCF2L-231ENST00000494043 MAN1B1Q9UKM7 699 aa12.69□□□□□ -0.38
MCF2L-231ENST00000494043 PTPN22Q9Y2R2 807 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms