RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 SLC37A4O43826 429 aa25.57■■□□□ 1.68
SNIP1-203ENST00000493916 JAK3P52333 1124 aa25.57■■□□□ 1.68
SNIP1-203ENST00000493916 WDR5P61964 334 aaKnown RBP25.57■■□□□ 1.68
SNIP1-203ENST00000493916 NR5A1Q13285 461 aa25.57■■□□□ 1.68
SNIP1-203ENST00000493916 TCTN1Q2MV58 587 aa25.57■■□□□ 1.68
SNIP1-203ENST00000493916 RDM1Q8NG50 284 aa25.57■■□□□ 1.68
SNIP1-203ENST00000493916 FAM161BQ96MY7 647 aa25.57■■□□□ 1.68
SNIP1-203ENST00000493916 DISC1Q9NRI5 854 aa25.57■■□□□ 1.68
SNIP1-203ENST00000493916 SAMM50Q9Y512 469 aa25.57■■□□□ 1.68
SNIP1-203ENST00000493916 PCDHA2Q9Y5H9 948 aa25.57■■□□□ 1.68
SNIP1-203ENST00000493916 PCDHA11Q9Y5I1 949 aa25.57■■□□□ 1.68
SNIP1-203ENST00000493916 KAT6AQ92794 2004 aa25.57■■□□□ 1.68
SNIP1-203ENST00000493916 ATP4AP20648 1035 aa25.56■■□□□ 1.68
SNIP1-203ENST00000493916 KCNJ6P48051 423 aa25.56■■□□□ 1.68
SNIP1-203ENST00000493916 MGAT3Q09327 533 aa25.56■■□□□ 1.68
SNIP1-203ENST00000493916 PLEKHG4Q58EX7 1191 aa25.56■■□□□ 1.68
SNIP1-203ENST00000493916 EARS2Q5JPH6 523 aaKnown RBP25.56■■□□□ 1.68
SNIP1-203ENST00000493916 KRT40Q6A162 431 aa25.56■■□□□ 1.68
SNIP1-203ENST00000493916 B3GNT9Q6UX72 402 aa25.56■■□□□ 1.68
SNIP1-203ENST00000493916 TRAPPC12Q8WVT3 735 aa25.56■■□□□ 1.68
SNIP1-203ENST00000493916 UNC45AQ9H3U1 944 aa25.56■■□□□ 1.68
SNIP1-203ENST00000493916 GABBR1Q9UBS5 961 aa25.56■■□□□ 1.68
SNIP1-203ENST00000493916 STXBP5LQ9Y2K9 1186 aa25.56■■□□□ 1.68
SNIP1-203ENST00000493916 ST18O60284 1047 aa25.55■■□□□ 1.68
SNIP1-203ENST00000493916 CHRNA1P02708 482 aa25.55■■□□□ 1.68
SNIP1-203ENST00000493916 HMGN5P82970 282 aaKnown RBP25.55■■□□□ 1.68
SNIP1-203ENST00000493916 IKBKEQ14164 716 aa25.55■■□□□ 1.68
SNIP1-203ENST00000493916 ZNF484Q5JVG2 852 aa25.55■■□□□ 1.68
SNIP1-203ENST00000493916 MTHFD1LQ6UB35 978 aa25.55■■□□□ 1.68
SNIP1-203ENST00000493916 DIS3L2Q8IYB7 885 aaKnown RBP25.55■■□□□ 1.68
SNIP1-203ENST00000493916 DNAJB3Q8WWF6 145 aa25.55■■□□□ 1.68
SNIP1-203ENST00000493916 BBXQ8WY36 941 aaPredicted RBP25.55■■□□□ 1.68
SNIP1-203ENST00000493916 GJA10Q969M2 543 aa25.55■■□□□ 1.68
SNIP1-203ENST00000493916 TBC1D32Q96NH3 1257 aa25.55■■□□□ 1.68
SNIP1-203ENST00000493916 KCNMB3Q9NPA1 279 aa25.55■■□□□ 1.68
SNIP1-203ENST00000493916 YBX2Q9Y2T7 364 aaKnown RBP25.55■■□□□ 1.68
SNIP1-203ENST00000493916 CDH23Q9H251 3354 aa25.55■■□□□ 1.68
SNIP1-203ENST00000493916 GBF1Q92538 1859 aa25.55■■□□□ 1.68
SNIP1-203ENST00000493916 ZBTB42B2RXF5 422 aa25.54■■□□□ 1.68
SNIP1-203ENST00000493916 CHMP2AO43633 222 aa25.54■■□□□ 1.68
SNIP1-203ENST00000493916 CCNT1O60563 726 aaKnown RBP25.54■■□□□ 1.68
SNIP1-203ENST00000493916 RABGGTBP53611 331 aa25.54■■□□□ 1.68
SNIP1-203ENST00000493916 MKRN4PQ13434 485 aaPredicted RBP25.54■■□□□ 1.68
SNIP1-203ENST00000493916 HERC6Q8IVU3 1022 aa25.54■■□□□ 1.68
SNIP1-203ENST00000493916 CKAP2LQ8IYA6 745 aa25.54■■□□□ 1.68
SNIP1-203ENST00000493916 DBF4BQ8NFT6 615 aa25.54■■□□□ 1.68
SNIP1-203ENST00000493916 ZBTB10Q96DT7 871 aa25.54■■□□□ 1.68
SNIP1-203ENST00000493916 FAM167AQ96KS9 214 aa25.54■■□□□ 1.68
SNIP1-203ENST00000493916 FAM20AQ96MK3 541 aa25.54■■□□□ 1.68
SNIP1-203ENST00000493916 ZNF576Q9H609 170 aa25.54■■□□□ 1.68
SNIP1-203ENST00000493916 SIP14410 1827 aa25.53■■□□□ 1.68
SNIP1-203ENST00000493916 COL6A3P12111 3177 aa25.53■■□□□ 1.68
SNIP1-203ENST00000493916 SMIM35A0A1B0GVV1 85 aa25.53■■□□□ 1.68
SNIP1-203ENST00000493916 FAM205CA6NFA0 338 aa25.53■■□□□ 1.68
SNIP1-203ENST00000493916 BTBD18B2RXH4 712 aa25.53■■□□□ 1.68
SNIP1-203ENST00000493916 TBX3O15119 743 aa25.53■■□□□ 1.68
SNIP1-203ENST00000493916 SEPT8Q92599 483 aa25.53■■□□□ 1.68
SNIP1-203ENST00000493916 FOSBP53539 338 aa25.52■■□□□ 1.68
SNIP1-203ENST00000493916 MRPS6P82932 125 aaKnown RBP25.52■■□□□ 1.68
SNIP1-203ENST00000493916 APBB2Q92870 758 aa25.52■■□□□ 1.68
SNIP1-203ENST00000493916 CDX2Q99626 313 aaPredicted RBP25.52■■□□□ 1.68
SNIP1-203ENST00000493916 OSBPL7Q9BZF2 842 aa25.52■■□□□ 1.68
SNIP1-203ENST00000493916 FAM49AQ9H0Q0 323 aaPredicted RBP25.52■■□□□ 1.68
SNIP1-203ENST00000493916 NKX2-4Q9H2Z4 354 aa25.52■■□□□ 1.68
SNIP1-203ENST00000493916 CEP131Q9UPN4 1083 aa25.52■■□□□ 1.68
SNIP1-203ENST00000493916 PTPRSQ13332 1948 aa25.52■■□□□ 1.68
SNIP1-203ENST00000493916 ZNF862O60290 1169 aa25.51■■□□□ 1.67
SNIP1-203ENST00000493916 KLRC1P26715 233 aa25.51■■□□□ 1.67
SNIP1-203ENST00000493916 DEFB103AP81534 67 aa25.51■■□□□ 1.67
SNIP1-203ENST00000493916 IER5Q5VY09 327 aa25.51■■□□□ 1.67
SNIP1-203ENST00000493916 MIER3Q7Z3K6 550 aa25.51■■□□□ 1.67
SNIP1-203ENST00000493916 NME8Q8N427 588 aa25.51■■□□□ 1.67
SNIP1-203ENST00000493916 C8orf76Q96K31 380 aa25.51■■□□□ 1.67
SNIP1-203ENST00000493916 VAV3Q9UKW4 847 aa25.51■■□□□ 1.67
SNIP1-203ENST00000493916 CDY2AQ9Y6F7 541 aa25.51■■□□□ 1.67
SNIP1-203ENST00000493916 C22orf31O95567 290 aa25.5■■□□□ 1.67
SNIP1-203ENST00000493916 OATP04181 439 aa25.5■■□□□ 1.67
SNIP1-203ENST00000493916 PRKCEQ02156 737 aa25.5■■□□□ 1.67
SNIP1-203ENST00000493916 PPP2R5CQ13362 524 aa25.5■■□□□ 1.67
SNIP1-203ENST00000493916 SAFBQ15424 915 aaKnown RBP eCLIP25.5■■□□□ 1.67
SNIP1-203ENST00000493916 UGCGQ16739 394 aa25.5■■□□□ 1.67
SNIP1-203ENST00000493916 IFIH1Q9BYX4 1025 aaKnown RBP25.5■■□□□ 1.67
SNIP1-203ENST00000493916 SLC28A3Q9HAS3 691 aa25.5■■□□□ 1.67
SNIP1-203ENST00000493916 CHD7Q9P2D1 2997 aa25.5■■□□□ 1.67
SNIP1-203ENST00000493916 MYH9P35579 1960 aaKnown RBP25.49■■□□□ 1.67
SNIP1-203ENST00000493916 GHRP10912 638 aa25.49■■□□□ 1.67
SNIP1-203ENST00000493916 MYOGP15173 224 aa25.49■■□□□ 1.67
SNIP1-203ENST00000493916 LPIN1Q14693 890 aa25.49■■□□□ 1.67
SNIP1-203ENST00000493916 GRIN2CQ14957 1233 aa25.49■■□□□ 1.67
SNIP1-203ENST00000493916 FBXO47Q5MNV8 452 aa25.49■■□□□ 1.67
SNIP1-203ENST00000493916 POTEDQ86YR6 584 aa25.49■■□□□ 1.67
SNIP1-203ENST00000493916 HAS1Q92839 578 aa25.49■■□□□ 1.67
SNIP1-203ENST00000493916 TRPV2Q9Y5S1 764 aa25.49■■□□□ 1.67
SNIP1-203ENST00000493916 SQORQ9Y6N5 450 aa25.49■■□□□ 1.67
SNIP1-203ENST00000493916 MICAL3Q7RTP6 2002 aa25.49■■□□□ 1.67
SNIP1-203ENST00000493916 WDR81Q562E7 1941 aa25.49■■□□□ 1.67
SNIP1-203ENST00000493916 KDM3AQ9Y4C1 1321 aa25.48■■□□□ 1.67
SNIP1-203ENST00000493916 KIF28PB7ZC32 967 aa25.48■■□□□ 1.67
SNIP1-203ENST00000493916 RBAK-RBAKDNI3L0D1 243 aa25.48■■□□□ 1.67
SNIP1-203ENST00000493916 M0QZ92 97 aa25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms