RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 PRPF3O43395 683 aaKnown RBP13.89□□□□□ -0.19
UPF3A-210ENST00000493727 NR3C2P08235 984 aa13.89□□□□□ -0.19
UPF3A-210ENST00000493727 SMARCA1P28370 1054 aa13.89□□□□□ -0.19
UPF3A-210ENST00000493727 MRPS5P82675 430 aaKnown RBP13.89□□□□□ -0.19
UPF3A-210ENST00000493727 NNTQ13423 1086 aa13.89□□□□□ -0.19
UPF3A-210ENST00000493727 ITGA7Q13683 1181 aa13.89□□□□□ -0.19
UPF3A-210ENST00000493727 BAATQ14032 418 aaPredicted RBP13.89□□□□□ -0.19
UPF3A-210ENST00000493727 DUSP28Q4G0W2 176 aa13.89□□□□□ -0.19
UPF3A-210ENST00000493727 BRDTQ58F21 947 aaPredicted RBP13.89□□□□□ -0.19
UPF3A-210ENST00000493727 RNF207Q6ZRF8 634 aa13.89□□□□□ -0.19
UPF3A-210ENST00000493727 EEPD1Q7L9B9 569 aa13.89□□□□□ -0.19
UPF3A-210ENST00000493727 ADGRF4Q8IZF3 695 aa13.89□□□□□ -0.19
UPF3A-210ENST00000493727 DNERQ8NFT8 737 aa13.89□□□□□ -0.19
UPF3A-210ENST00000493727 VWCEQ96DN2 955 aa13.89□□□□□ -0.19
UPF3A-210ENST00000493727 KCTD15Q96SI1 283 aaPredicted RBP13.89□□□□□ -0.19
UPF3A-210ENST00000493727 UHRF1Q96T88 793 aaPredicted RBP13.89□□□□□ -0.19
UPF3A-210ENST00000493727 NKX2-4Q9H2Z4 354 aa13.89□□□□□ -0.19
UPF3A-210ENST00000493727 PCDHB9Q9Y5E1 797 aa13.89□□□□□ -0.19
UPF3A-210ENST00000493727 GRIN2DO15399 1336 aa13.89□□□□□ -0.19
UPF3A-210ENST00000493727 SCN5AQ14524 2016 aa13.88□□□□□ -0.19
UPF3A-210ENST00000493727 NFIBO00712 420 aa13.88□□□□□ -0.19
UPF3A-210ENST00000493727 NKRFO15226 690 aaKnown RBP eCLIP13.88□□□□□ -0.19
UPF3A-210ENST00000493727 TRIM29Q14134 588 aa13.88□□□□□ -0.19
UPF3A-210ENST00000493727 CDC37Q16543 378 aaPredicted RBP13.88□□□□□ -0.19
UPF3A-210ENST00000493727 PIGSQ96S52 555 aa13.88□□□□□ -0.19
UPF3A-210ENST00000493727 ALG1Q9BT22 464 aa13.88□□□□□ -0.19
UPF3A-210ENST00000493727 WDR11Q9BZH6 1224 aa13.88□□□□□ -0.19
UPF3A-210ENST00000493727 WNT8AQ9H1J5 351 aa13.88□□□□□ -0.19
UPF3A-210ENST00000493727 RIOX1Q9H6W3 641 aa13.88□□□□□ -0.19
UPF3A-210ENST00000493727 PDGFCQ9NRA1 345 aa13.88□□□□□ -0.19
UPF3A-210ENST00000493727 MSRAQ9UJ68 235 aa13.88□□□□□ -0.19
UPF3A-210ENST00000493727 SCN10AQ9Y5Y9 1956 aa13.88□□□□□ -0.19
UPF3A-210ENST00000493727 RBM47A0AV96 593 aaKnown RBP13.87□□□□□ -0.19
UPF3A-210ENST00000493727 H3BQV1 296 aa13.87□□□□□ -0.19
UPF3A-210ENST00000493727 CYTH3O43739 400 aa13.87□□□□□ -0.19
UPF3A-210ENST00000493727 SCG2P13521 617 aa13.87□□□□□ -0.19
UPF3A-210ENST00000493727 XBP1P17861 261 aa13.87□□□□□ -0.19
UPF3A-210ENST00000493727 PDCP20941 246 aa13.87□□□□□ -0.19
UPF3A-210ENST00000493727 FSHRP23945 695 aa13.87□□□□□ -0.19
UPF3A-210ENST00000493727 CALML3P27482 149 aa13.87□□□□□ -0.19
UPF3A-210ENST00000493727 CPT1AP50416 773 aa13.87□□□□□ -0.19
UPF3A-210ENST00000493727 CCDC85BQ15834 202 aaPredicted RBP13.87□□□□□ -0.19
UPF3A-210ENST00000493727 HEATR3Q7Z4Q2 680 aa13.87□□□□□ -0.19
UPF3A-210ENST00000493727 RGS22Q8NE09 1264 aa13.87□□□□□ -0.19
UPF3A-210ENST00000493727 CLEC4DQ8WXI8 215 aa13.87□□□□□ -0.19
UPF3A-210ENST00000493727 C8orf76Q96K31 380 aa13.87□□□□□ -0.19
UPF3A-210ENST00000493727 NOC4LQ9BVI4 516 aaKnown RBP13.87□□□□□ -0.19
UPF3A-210ENST00000493727 HIPK3Q9H422 1215 aa13.87□□□□□ -0.19
UPF3A-210ENST00000493727 JMJD4Q9H9V9 463 aa13.87□□□□□ -0.19
UPF3A-210ENST00000493727 KIAA1217Q5T5P2 1943 aa13.87□□□□□ -0.19
UPF3A-210ENST00000493727 TET1Q8NFU7 2136 aa13.87□□□□□ -0.19
UPF3A-210ENST00000493727 TANC1Q9C0D5 1861 aa13.87□□□□□ -0.19
UPF3A-210ENST00000493727 A6NJR5 290 aa13.86□□□□□ -0.19
UPF3A-210ENST00000493727 ESPNB1AK53 854 aa13.86□□□□□ -0.19
UPF3A-210ENST00000493727 ZBTB5O15062 677 aa13.86□□□□□ -0.19
UPF3A-210ENST00000493727 KPNA6O60684 536 aa13.86□□□□□ -0.19
UPF3A-210ENST00000493727 FGBP02675 491 aa13.86□□□□□ -0.19
UPF3A-210ENST00000493727 SUPT20HL2P0C7V6 817 aa13.86□□□□□ -0.19
UPF3A-210ENST00000493727 PTGS1P23219 599 aa13.86□□□□□ -0.19
UPF3A-210ENST00000493727 PLA2G5P39877 138 aa13.86□□□□□ -0.19
UPF3A-210ENST00000493727 MCCD1P59942 119 aaPredicted RBP13.86□□□□□ -0.19
UPF3A-210ENST00000493727 RPS6P62753 249 aaKnown RBP13.86□□□□□ -0.19
UPF3A-210ENST00000493727 TRAF1Q13077 416 aa13.86□□□□□ -0.19
UPF3A-210ENST00000493727 PFKFB3Q16875 520 aaPredicted RBP13.86□□□□□ -0.19
UPF3A-210ENST00000493727 SLC35G1Q2M3R5 365 aa13.86□□□□□ -0.19
UPF3A-210ENST00000493727 LARP1BQ659C4 914 aaKnown RBP13.86□□□□□ -0.19
UPF3A-210ENST00000493727 SLC30A10Q6XR72 485 aa13.86□□□□□ -0.19
UPF3A-210ENST00000493727 SCFD2Q8WU76 684 aa13.86□□□□□ -0.19
UPF3A-210ENST00000493727 KLF16Q9BXK1 252 aaPredicted RBP13.86□□□□□ -0.19
UPF3A-210ENST00000493727 SLC28A3Q9HAS3 691 aa13.86□□□□□ -0.19
UPF3A-210ENST00000493727 PIEZO1Q92508 2521 aa13.85□□□□□ -0.19
UPF3A-210ENST00000493727 PNMA6FA0A0J9YX94 578 aa13.85□□□□□ -0.19
UPF3A-210ENST00000493727 VPS37CA5D8V6 355 aaPredicted RBP13.85□□□□□ -0.19
UPF3A-210ENST00000493727 B4GALT4O60513 344 aa13.85□□□□□ -0.19
UPF3A-210ENST00000493727 FDPSP14324 419 aaKnown RBP13.85□□□□□ -0.19
UPF3A-210ENST00000493727 IGFBP4P22692 258 aa13.85□□□□□ -0.19
UPF3A-210ENST00000493727 EDNRBP24530 442 aa13.85□□□□□ -0.19
UPF3A-210ENST00000493727 QRICH1Q2TAL8 776 aa13.85□□□□□ -0.19
UPF3A-210ENST00000493727 NBPF20Q3BBV1 942 aa13.85□□□□□ -0.19
UPF3A-210ENST00000493727 OTOP2Q7RTS6 562 aa13.85□□□□□ -0.19
UPF3A-210ENST00000493727 RPUSD2Q8IZ73 545 aaKnown RBP13.85□□□□□ -0.19
UPF3A-210ENST00000493727 CRIPAKQ8N1N5 446 aa13.85□□□□□ -0.19
UPF3A-210ENST00000493727 OR6J1Q8NGC5 347 aa13.85□□□□□ -0.19
UPF3A-210ENST00000493727 CCDC12Q8WUD4 166 aaPredicted RBP13.85□□□□□ -0.19
UPF3A-210ENST00000493727 PURBQ96QR8 312 aaKnown RBP13.85□□□□□ -0.19
UPF3A-210ENST00000493727 DDX49Q9Y6V7 483 aaKnown RBP13.85□□□□□ -0.19
UPF3A-210ENST00000493727 ABCB11O95342 1321 aa13.85□□□□□ -0.19
UPF3A-210ENST00000493727 PTPRSQ13332 1948 aa13.84□□□□□ -0.19
UPF3A-210ENST00000493727 hCG_1984214I3L0E3 225 aa13.84□□□□□ -0.19
UPF3A-210ENST00000493727 PFKMP08237 780 aa13.84□□□□□ -0.19
UPF3A-210ENST00000493727 BMP1P13497 986 aa13.84□□□□□ -0.19
UPF3A-210ENST00000493727 SMCPP49901 116 aaPredicted RBP13.84□□□□□ -0.19
UPF3A-210ENST00000493727 RABGGTBP53611 331 aa13.84□□□□□ -0.19
UPF3A-210ENST00000493727 NAPAP54920 295 aa13.84□□□□□ -0.19
UPF3A-210ENST00000493727 CCL23P55773 120 aa13.84□□□□□ -0.19
UPF3A-210ENST00000493727 TTLL4Q14679 1199 aa13.84□□□□□ -0.19
UPF3A-210ENST00000493727 PKN1Q16512 942 aa13.84□□□□□ -0.19
UPF3A-210ENST00000493727 INTS6LQ5JSJ4 861 aaKnown RBP13.84□□□□□ -0.19
UPF3A-210ENST00000493727 FBXO11Q86XK2 927 aa13.84□□□□□ -0.19
UPF3A-210ENST00000493727 MCF2L2Q86YR7 1114 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 456.3 ms