RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 ZNF296Q8WUU4 475 aaPredicted RBP14.11□□□□□ -0.15
VPS52-220ENST00000493674 DDX12PQ92771 950 aa14.11□□□□□ -0.15
VPS52-220ENST00000493674 ERO1AQ96HE7 468 aa14.11□□□□□ -0.15
VPS52-220ENST00000493674 PCYT2Q99447 389 aa14.11□□□□□ -0.15
VPS52-220ENST00000493674 GPR20Q99678 358 aa14.11□□□□□ -0.15
VPS52-220ENST00000493674 BHMT2Q9H2M3 363 aa14.11□□□□□ -0.15
VPS52-220ENST00000493674 ANKEF1Q9NU02 776 aa14.11□□□□□ -0.15
VPS52-220ENST00000493674 KCND2Q9NZV8 630 aa14.11□□□□□ -0.15
VPS52-220ENST00000493674 SAMM50Q9Y512 469 aa14.11□□□□□ -0.15
VPS52-220ENST00000493674 EMSYQ7Z589 1322 aa14.11□□□□□ -0.15
VPS52-220ENST00000493674 GOLGA6L3A6NEY3 463 aa14.1□□□□□ -0.15
VPS52-220ENST00000493674 ZBTB39O15060 712 aa14.1□□□□□ -0.15
VPS52-220ENST00000493674 DKC1O60832 514 aaKnown RBP eCLIP14.1□□□□□ -0.15
VPS52-220ENST00000493674 ASIC1P78348 528 aa14.1□□□□□ -0.15
VPS52-220ENST00000493674 IQCB1Q15051 598 aa14.1□□□□□ -0.15
VPS52-220ENST00000493674 KMT5BQ4FZB7 885 aa14.1□□□□□ -0.15
VPS52-220ENST00000493674 DUSP28Q4G0W2 176 aa14.1□□□□□ -0.15
VPS52-220ENST00000493674 COBLL1Q53SF7 1204 aa14.1□□□□□ -0.15
VPS52-220ENST00000493674 CT47A1Q5JQC4 288 aaPredicted RBP14.1□□□□□ -0.15
VPS52-220ENST00000493674 ZNF658Q5TYW1 1059 aaPredicted RBP14.1□□□□□ -0.15
VPS52-220ENST00000493674 RINT1Q6NUQ1 792 aa14.1□□□□□ -0.15
VPS52-220ENST00000493674 C1orf186Q6ZWK4 172 aa14.1□□□□□ -0.15
VPS52-220ENST00000493674 MLKLQ8NB16 471 aa14.1□□□□□ -0.15
VPS52-220ENST00000493674 PIGOQ8TEQ8 1089 aa14.1□□□□□ -0.15
VPS52-220ENST00000493674 ATP6V0A1Q93050 837 aa14.1□□□□□ -0.15
VPS52-220ENST00000493674 RUSC1Q9BVN2 902 aa14.1□□□□□ -0.15
VPS52-220ENST00000493674 GABBR1Q9UBS5 961 aa14.1□□□□□ -0.15
VPS52-220ENST00000493674 NRBP1Q9UHY1 535 aa14.1□□□□□ -0.15
VPS52-220ENST00000493674 HTTP42858 3142 aa14.1□□□□□ -0.15
VPS52-220ENST00000493674 NKRFO15226 690 aaKnown RBP eCLIP14.09□□□□□ -0.15
VPS52-220ENST00000493674 ADCY6O43306 1168 aa14.09□□□□□ -0.15
VPS52-220ENST00000493674 GH1P01241 217 aa14.09□□□□□ -0.15
VPS52-220ENST00000493674 ATP4AP20648 1035 aa14.09□□□□□ -0.15
VPS52-220ENST00000493674 CYP2B6P20813 491 aa14.09□□□□□ -0.15
VPS52-220ENST00000493674 GUCY2CP25092 1073 aa14.09□□□□□ -0.15
VPS52-220ENST00000493674 YWHABP31946 246 aaKnown RBP14.09□□□□□ -0.15
VPS52-220ENST00000493674 ADCYAP1R1P41586 468 aa14.09□□□□□ -0.15
VPS52-220ENST00000493674 RARRES1P49788 294 aa14.09□□□□□ -0.15
VPS52-220ENST00000493674 GIT2Q14161 759 aa14.09□□□□□ -0.15
VPS52-220ENST00000493674 DHX8Q14562 1220 aaKnown RBP14.09□□□□□ -0.15
VPS52-220ENST00000493674 ARHGEF6Q15052 776 aa14.09□□□□□ -0.15
VPS52-220ENST00000493674 HSDL1Q3SXM5 330 aa14.09□□□□□ -0.15
VPS52-220ENST00000493674 COL13A1Q5TAT6 717 aaPredicted RBP14.09□□□□□ -0.15
VPS52-220ENST00000493674 IQSEC1Q6DN90 963 aa14.09□□□□□ -0.15
VPS52-220ENST00000493674 ANO5Q75V66 913 aa14.09□□□□□ -0.15
VPS52-220ENST00000493674 CTU1Q7Z7A3 348 aaKnown RBP14.09□□□□□ -0.15
VPS52-220ENST00000493674 SEPT1Q8WYJ6 367 aa14.09□□□□□ -0.15
VPS52-220ENST00000493674 COPS5Q92905 334 aa14.09□□□□□ -0.15
VPS52-220ENST00000493674 REEP2Q9BRK0 252 aa14.09□□□□□ -0.15
VPS52-220ENST00000493674 GTPBP4Q9BZE4 634 aaKnown RBP14.09□□□□□ -0.15
VPS52-220ENST00000493674 GRPEL1Q9HAV7 217 aa14.09□□□□□ -0.15
VPS52-220ENST00000493674 CBX8Q9HC52 389 aa14.09□□□□□ -0.15
VPS52-220ENST00000493674 GABRQQ9UN88 632 aa14.09□□□□□ -0.15
VPS52-220ENST00000493674 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.08□□□□□ -0.16
VPS52-220ENST00000493674 PPP1R3GB7ZBB8 358 aa14.08□□□□□ -0.16
VPS52-220ENST00000493674 SORBS3O60504 671 aa14.08□□□□□ -0.16
VPS52-220ENST00000493674 CD44P16070 742 aaKnown RBP14.08□□□□□ -0.16
VPS52-220ENST00000493674 SMPD1P17405 629 aa14.08□□□□□ -0.16
VPS52-220ENST00000493674 TCF7P36402 384 aaPredicted RBP14.08□□□□□ -0.16
VPS52-220ENST00000493674 FLT3LGP49771 235 aa14.08□□□□□ -0.16
VPS52-220ENST00000493674 ZNF165P49910 485 aa14.08□□□□□ -0.16
VPS52-220ENST00000493674 ZNF131P52739 623 aa14.08□□□□□ -0.16
VPS52-220ENST00000493674 PRKCEQ02156 737 aa14.08□□□□□ -0.16
VPS52-220ENST00000493674 PRKCZQ05513 592 aa14.08□□□□□ -0.16
VPS52-220ENST00000493674 LAMC2Q13753 1193 aa14.08□□□□□ -0.16
VPS52-220ENST00000493674 PKN2Q16513 984 aaKnown RBP14.08□□□□□ -0.16
VPS52-220ENST00000493674 CCDC144BQ3MJ40 725 aa14.08□□□□□ -0.16
VPS52-220ENST00000493674 SWSAP1Q6NVH7 229 aa14.08□□□□□ -0.16
VPS52-220ENST00000493674 DYMQ7RTS9 669 aa14.08□□□□□ -0.16
VPS52-220ENST00000493674 DHX40Q8IX18 779 aaKnown RBP14.08□□□□□ -0.16
VPS52-220ENST00000493674 DHX37Q8IY37 1157 aaKnown RBP14.08□□□□□ -0.16
VPS52-220ENST00000493674 MLXIPQ9HAP2 919 aa14.08□□□□□ -0.16
VPS52-220ENST00000493674 ZNF302Q9NR11 478 aa14.08□□□□□ -0.16
VPS52-220ENST00000493674 GNEQ9Y223 722 aaKnown RBP14.08□□□□□ -0.16
VPS52-220ENST00000493674 PCDHA2Q9Y5H9 948 aa14.08□□□□□ -0.16
VPS52-220ENST00000493674 NPHP3-ACAD11A0A0J9YXS1 232 aa14.07□□□□□ -0.16
VPS52-220ENST00000493674 IKBKBO14920 756 aa14.07□□□□□ -0.16
VPS52-220ENST00000493674 ECM2O94769 699 aaPredicted RBP14.07□□□□□ -0.16
VPS52-220ENST00000493674 GNRH1P01148 92 aa14.07□□□□□ -0.16
VPS52-220ENST00000493674 SSBP05455 408 aaKnown RBP eCLIP14.07□□□□□ -0.16
VPS52-220ENST00000493674 CYBAP13498 195 aa14.07□□□□□ -0.16
VPS52-220ENST00000493674 CYP2C19P33261 490 aa14.07□□□□□ -0.16
VPS52-220ENST00000493674 MRE11P49959 708 aa14.07□□□□□ -0.16
VPS52-220ENST00000493674 SP4Q02446 784 aa14.07□□□□□ -0.16
VPS52-220ENST00000493674 COASYQ13057 564 aa14.07□□□□□ -0.16
VPS52-220ENST00000493674 MAPK7Q13164 816 aa14.07□□□□□ -0.16
VPS52-220ENST00000493674 PSMD2Q13200 908 aa14.07□□□□□ -0.16
VPS52-220ENST00000493674 KIF22Q14807 665 aa14.07□□□□□ -0.16
VPS52-220ENST00000493674 NCAPHQ15003 741 aa14.07□□□□□ -0.16
VPS52-220ENST00000493674 UVSSAQ2YD98 709 aa14.07□□□□□ -0.16
VPS52-220ENST00000493674 XKR3Q5GH77 459 aa14.07□□□□□ -0.16
VPS52-220ENST00000493674 GJC2Q5T442 439 aaPredicted RBP14.07□□□□□ -0.16
VPS52-220ENST00000493674 FAM160B1Q5W0V3 765 aa14.07□□□□□ -0.16
VPS52-220ENST00000493674 ISM2Q6H9L7 571 aa14.07□□□□□ -0.16
VPS52-220ENST00000493674 PLPPR4Q7Z2D5 763 aa14.07□□□□□ -0.16
VPS52-220ENST00000493674 TRMT44Q8IYL2 757 aaKnown RBP14.07□□□□□ -0.16
VPS52-220ENST00000493674 KIAA0895Q8NCT3 520 aa14.07□□□□□ -0.16
VPS52-220ENST00000493674 PPTC7Q8NI37 304 aa14.07□□□□□ -0.16
VPS52-220ENST00000493674 TRIB2Q92519 343 aa14.07□□□□□ -0.16
VPS52-220ENST00000493674 CCDC47Q96A33 483 aaKnown RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms