RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 LRIT3Q3SXY7 679 aa19.25■□□□□ 0.67
LIME1-208ENST00000493265 RESP18Q5W5W9 173 aa19.25■□□□□ 0.67
LIME1-208ENST00000493265 POTEGQ6S5H5 508 aa19.25■□□□□ 0.67
LIME1-208ENST00000493265 PDILTQ8N807 584 aa19.25■□□□□ 0.67
LIME1-208ENST00000493265 FSIP1Q8NA03 581 aa19.25■□□□□ 0.67
LIME1-208ENST00000493265 ZNF579Q8NAF0 562 aaKnown RBP19.25■□□□□ 0.67
LIME1-208ENST00000493265 PCSK9Q8NBP7 692 aaKnown RBP19.25■□□□□ 0.67
LIME1-208ENST00000493265 ATP6V0A1Q93050 837 aa19.25■□□□□ 0.67
LIME1-208ENST00000493265 VTI1AQ96AJ9 217 aa19.25■□□□□ 0.67
LIME1-208ENST00000493265 CALML4Q96GE6 196 aa19.25■□□□□ 0.67
LIME1-208ENST00000493265 HSD17B14Q9BPX1 270 aa19.25■□□□□ 0.67
LIME1-208ENST00000493265 SMARCAD1Q9H4L7 1026 aa19.25■□□□□ 0.67
LIME1-208ENST00000493265 FAM13BQ9NYF5 915 aa19.25■□□□□ 0.67
LIME1-208ENST00000493265 WRAP73Q9P2S5 460 aaPredicted RBP19.25■□□□□ 0.67
LIME1-208ENST00000493265 EMSYQ7Z589 1322 aa19.25■□□□□ 0.67
LIME1-208ENST00000493265 IGKV6D-21A0A0A0MT36 114 aa19.24■□□□□ 0.67
LIME1-208ENST00000493265 A0A1B0GVL5 298 aa19.24■□□□□ 0.67
LIME1-208ENST00000493265 GOLGA6L22H0YM25 854 aa19.24■□□□□ 0.67
LIME1-208ENST00000493265 H3BRB1 525 aa19.24■□□□□ 0.67
LIME1-208ENST00000493265 LGR5O75473 907 aa19.24■□□□□ 0.67
LIME1-208ENST00000493265 HOXD8P13378 290 aaPredicted RBP19.24■□□□□ 0.67
LIME1-208ENST00000493265 CST5P28325 142 aaPredicted RBP19.24■□□□□ 0.67
LIME1-208ENST00000493265 ACLYP53396 1101 aa19.24■□□□□ 0.67
LIME1-208ENST00000493265 PSMC5P62195 406 aa19.24■□□□□ 0.67
LIME1-208ENST00000493265 PSMC6P62333 389 aa19.24■□□□□ 0.67
LIME1-208ENST00000493265 PURAQ00577 322 aaKnown RBP19.24■□□□□ 0.67
LIME1-208ENST00000493265 MDM2Q00987 491 aaPredicted RBP19.24■□□□□ 0.67
LIME1-208ENST00000493265 GPR153Q6NV75 609 aa19.24■□□□□ 0.67
LIME1-208ENST00000493265 TMEM87AQ8NBN3 555 aa19.24■□□□□ 0.67
LIME1-208ENST00000493265 NEK9Q8TD19 979 aa19.24■□□□□ 0.67
LIME1-208ENST00000493265 C16orf70Q9BSU1 422 aa19.24■□□□□ 0.67
LIME1-208ENST00000493265 MTG1Q9BT17 334 aaPredicted RBP19.24■□□□□ 0.67
LIME1-208ENST00000493265 POLR3CQ9BUI4 534 aaPredicted RBP19.24■□□□□ 0.67
LIME1-208ENST00000493265 TUT1Q9H6E5 874 aaKnown RBP19.24■□□□□ 0.67
LIME1-208ENST00000493265 TUFT1Q9NNX1 390 aa19.24■□□□□ 0.67
LIME1-208ENST00000493265 DDX19AQ9NUU7 478 aaKnown RBP19.24■□□□□ 0.67
LIME1-208ENST00000493265 ZNF215Q9UL58 517 aaPredicted RBP19.24■□□□□ 0.67
LIME1-208ENST00000493265 KIAA1024Q9UPX6 916 aa19.24■□□□□ 0.67
LIME1-208ENST00000493265 STK24Q9Y6E0 443 aa19.24■□□□□ 0.67
LIME1-208ENST00000493265 TMEM150BA6NC51 233 aa19.23■□□□□ 0.67
LIME1-208ENST00000493265 DDX11L8A8MPP1 907 aa19.23■□□□□ 0.67
LIME1-208ENST00000493265 ZBTB39O15060 712 aa19.23■□□□□ 0.67
LIME1-208ENST00000493265 ZNF862O60290 1169 aa19.23■□□□□ 0.67
LIME1-208ENST00000493265 KPNA6O60684 536 aa19.23■□□□□ 0.67
LIME1-208ENST00000493265 CMA1P23946 247 aa19.23■□□□□ 0.67
LIME1-208ENST00000493265 RPA1P27694 616 aa19.23■□□□□ 0.67
LIME1-208ENST00000493265 PSEN2P49810 448 aa19.23■□□□□ 0.67
LIME1-208ENST00000493265 NKX3-2P78367 333 aa19.23■□□□□ 0.67
LIME1-208ENST00000493265 PRKCEQ02156 737 aa19.23■□□□□ 0.67
LIME1-208ENST00000493265 GRB10Q13322 594 aa19.23■□□□□ 0.67
LIME1-208ENST00000493265 CCSAPQ6IQ19 270 aaPredicted RBP19.23■□□□□ 0.67
LIME1-208ENST00000493265 PLPPR4Q7Z2D5 763 aa19.23■□□□□ 0.67
LIME1-208ENST00000493265 PIGOQ8TEQ8 1089 aa19.23■□□□□ 0.67
LIME1-208ENST00000493265 MRPS27Q92552 414 aaKnown RBP19.23■□□□□ 0.67
LIME1-208ENST00000493265 PNMA5Q96PV4 448 aa19.23■□□□□ 0.67
LIME1-208ENST00000493265 ZSWIM4Q9H7M6 989 aa19.23■□□□□ 0.67
LIME1-208ENST00000493265 ERAP1Q9NZ08 941 aa19.23■□□□□ 0.67
LIME1-208ENST00000493265 CCDC39Q9UFE4 941 aa19.23■□□□□ 0.67
LIME1-208ENST00000493265 TRPC6Q9Y210 931 aa19.23■□□□□ 0.67
LIME1-208ENST00000493265 MAFBQ9Y5Q3 323 aaPredicted RBP19.23■□□□□ 0.67
LIME1-208ENST00000493265 IGSF9BQ9UPX0 1349 aa19.23■□□□□ 0.67
LIME1-208ENST00000493265 KDM3AQ9Y4C1 1321 aa19.23■□□□□ 0.67
LIME1-208ENST00000493265 A0A1W2PQ27 194 aa19.22■□□□□ 0.67
LIME1-208ENST00000493265 A0A1W2PQ64 194 aa19.22■□□□□ 0.67
LIME1-208ENST00000493265 A0A1W2PQD8 194 aa19.22■□□□□ 0.67
LIME1-208ENST00000493265 PFKFB1P16118 471 aa19.22■□□□□ 0.67
LIME1-208ENST00000493265 PLCG1P19174 1290 aa19.22■□□□□ 0.67
LIME1-208ENST00000493265 ATP4AP20648 1035 aa19.22■□□□□ 0.67
LIME1-208ENST00000493265 MFSD10Q14728 455 aa19.22■□□□□ 0.67
LIME1-208ENST00000493265 PLCB4Q15147 1175 aa19.22■□□□□ 0.67
LIME1-208ENST00000493265 KIAA0753Q2KHM9 967 aa19.22■□□□□ 0.67
LIME1-208ENST00000493265 AFAP1L1Q8TED9 768 aa19.22■□□□□ 0.67
LIME1-208ENST00000493265 KAT2BQ92831 832 aa19.22■□□□□ 0.67
LIME1-208ENST00000493265 SH2D3AQ9BRG2 576 aa19.22■□□□□ 0.67
LIME1-208ENST00000493265 CCSER1Q9C0I3 900 aa19.22■□□□□ 0.67
LIME1-208ENST00000493265 SENP6Q9GZR1 1112 aaPredicted RBP19.22■□□□□ 0.67
LIME1-208ENST00000493265 RNPEPQ9H4A4 650 aa19.22■□□□□ 0.67
LIME1-208ENST00000493265 GOLPH3LQ9H4A5 285 aa19.22■□□□□ 0.67
LIME1-208ENST00000493265 SEPT9Q9UHD8 586 aaPredicted RBP19.22■□□□□ 0.67
LIME1-208ENST00000493265 A0A087X0B3 334 aa19.21■□□□□ 0.67
LIME1-208ENST00000493265 E9PMD0 336 aa19.21■□□□□ 0.67
LIME1-208ENST00000493265 DNM1LO00429 736 aa19.21■□□□□ 0.67
LIME1-208ENST00000493265 DKC1O60832 514 aaKnown RBP eCLIP19.21■□□□□ 0.67
LIME1-208ENST00000493265 F2P00734 622 aa19.21■□□□□ 0.67
LIME1-208ENST00000493265 OATP04181 439 aa19.21■□□□□ 0.67
LIME1-208ENST00000493265 DHX8Q14562 1220 aaKnown RBP19.21■□□□□ 0.67
LIME1-208ENST00000493265 RRAGBQ5VZM2 374 aa19.21■□□□□ 0.67
LIME1-208ENST00000493265 PLA2G4FQ68DD2 849 aa19.21■□□□□ 0.67
LIME1-208ENST00000493265 CCDC43Q96MW1 224 aaKnown RBP19.21■□□□□ 0.67
LIME1-208ENST00000493265 TSEN34Q9BSV6 310 aaKnown RBP19.21■□□□□ 0.67
LIME1-208ENST00000493265 KCNH3Q9ULD8 1083 aa19.21■□□□□ 0.67
LIME1-208ENST00000493265 DNAH12Q6ZR08 3092 aa19.2■□□□□ 0.66
LIME1-208ENST00000493265 A0A1W2PQ45 241 aaPredicted RBP19.2■□□□□ 0.66
LIME1-208ENST00000493265 A0A1W2PQY0 241 aa19.2■□□□□ 0.66
LIME1-208ENST00000493265 MOXD2PA6NHM9 499 aa19.2■□□□□ 0.66
LIME1-208ENST00000493265 POLR2DO15514 142 aaKnown RBP19.2■□□□□ 0.66
LIME1-208ENST00000493265 SSBP05455 408 aaKnown RBP eCLIP19.2■□□□□ 0.66
LIME1-208ENST00000493265 YWHABP31946 246 aaKnown RBP19.2■□□□□ 0.66
LIME1-208ENST00000493265 MCM4P33991 863 aa19.2■□□□□ 0.66
LIME1-208ENST00000493265 STAT6P42226 847 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms