RNA–Protein interactions for RNA: ENST00000493256.1

LYSMD4-208, Transcript of LysM domain containing 4, humanhuman

TSL 3

Gene LYSMD4, Length 880 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-208ENST00000493256 SLC26A2P50443 739 aa25.2■■□□□ 1.62
LYSMD4-208ENST00000493256 NTRK3Q16288 839 aa25.2■■□□□ 1.62
LYSMD4-208ENST00000493256 IER5Q5VY09 327 aa25.2■■□□□ 1.62
LYSMD4-208ENST00000493256 MCTP2Q6DN12 878 aa25.2■■□□□ 1.62
LYSMD4-208ENST00000493256 TMEM192Q8IY95 271 aa25.2■■□□□ 1.62
LYSMD4-208ENST00000493256 IL17RAQ96F46 866 aa25.2■■□□□ 1.62
LYSMD4-208ENST00000493256 TTC3P53804 2025 aa25.2■■□□□ 1.62
LYSMD4-208ENST00000493256 IPO5O00410 1097 aaKnown RBP25.19■■□□□ 1.62
LYSMD4-208ENST00000493256 BACH1O14867 736 aa25.19■■□□□ 1.62
LYSMD4-208ENST00000493256 CD52P31358 61 aa25.19■■□□□ 1.62
LYSMD4-208ENST00000493256 TMEM62Q0P6H9 643 aa25.19■■□□□ 1.62
LYSMD4-208ENST00000493256 CCDC60Q8IWA6 550 aaPredicted RBP25.19■■□□□ 1.62
LYSMD4-208ENST00000493256 MRPL38Q96DV4 380 aaKnown RBP25.19■■□□□ 1.62
LYSMD4-208ENST00000493256 TRPV2Q9Y5S1 764 aa25.19■■□□□ 1.62
LYSMD4-208ENST00000493256 LOXHD1Q8IVV2 1947 aa25.19■■□□□ 1.62
LYSMD4-208ENST00000493256 RALGAPA2Q2PPJ7 1873 aa25.19■■□□□ 1.62
LYSMD4-208ENST00000493256 H3BNC9 293 aa25.18■■□□□ 1.62
LYSMD4-208ENST00000493256 GNA11P29992 359 aa25.18■■□□□ 1.62
LYSMD4-208ENST00000493256 PDIA3P30101 505 aaKnown RBP25.18■■□□□ 1.62
LYSMD4-208ENST00000493256 AKAP17AQ02040 695 aaKnown RBP25.18■■□□□ 1.62
LYSMD4-208ENST00000493256 FAM160B1Q5W0V3 765 aa25.18■■□□□ 1.62
LYSMD4-208ENST00000493256 MTHFD1LQ6UB35 978 aa25.18■■□□□ 1.62
LYSMD4-208ENST00000493256 RASGRP4Q8TDF6 673 aa25.18■■□□□ 1.62
LYSMD4-208ENST00000493256 LINC01599Q8WXQ3 324 aa25.18■■□□□ 1.62
LYSMD4-208ENST00000493256 SLC26A6Q9BXS9 759 aa25.18■■□□□ 1.62
LYSMD4-208ENST00000493256 RNF26Q9BY78 433 aaPredicted RBP25.18■■□□□ 1.62
LYSMD4-208ENST00000493256 RC3H2Q9HBD1 1191 aaKnown RBP25.18■■□□□ 1.62
LYSMD4-208ENST00000493256 NCOA5Q9HCD5 579 aaKnown RBP25.18■■□□□ 1.62
LYSMD4-208ENST00000493256 SMIM35A0A1B0GVV1 85 aa25.17■■□□□ 1.62
LYSMD4-208ENST00000493256 M0QZ92 97 aa25.17■■□□□ 1.62
LYSMD4-208ENST00000493256 HBP1O60381 514 aa25.17■■□□□ 1.62
LYSMD4-208ENST00000493256 IFNAR1P17181 557 aa25.17■■□□□ 1.62
LYSMD4-208ENST00000493256 EVCP57679 992 aa25.17■■□□□ 1.62
LYSMD4-208ENST00000493256 CCT2P78371 535 aaKnown RBP25.17■■□□□ 1.62
LYSMD4-208ENST00000493256 SETQ01105 290 aaPredicted RBP25.17■■□□□ 1.62
LYSMD4-208ENST00000493256 GPM6BQ13491 265 aa25.17■■□□□ 1.62
LYSMD4-208ENST00000493256 PTPROQ16827 1216 aa25.17■■□□□ 1.62
LYSMD4-208ENST00000493256 PDXDC2PQ6P474 469 aa25.17■■□□□ 1.62
LYSMD4-208ENST00000493256 FIBCD1Q8N539 461 aa25.17■■□□□ 1.62
LYSMD4-208ENST00000493256 ATP8B4Q8TF62 1192 aa25.17■■□□□ 1.62
LYSMD4-208ENST00000493256 ZNF577Q9BSK1 485 aa25.17■■□□□ 1.62
LYSMD4-208ENST00000493256 ZNF302Q9NR11 478 aa25.17■■□□□ 1.62
LYSMD4-208ENST00000493256 SQORQ9Y6N5 450 aa25.17■■□□□ 1.62
LYSMD4-208ENST00000493256 MYO7AQ13402 2215 aa25.17■■□□□ 1.62
LYSMD4-208ENST00000493256 ADGRA3Q8IWK6 1321 aa25.16■■□□□ 1.62
LYSMD4-208ENST00000493256 IGSF9BQ9UPX0 1349 aa25.16■■□□□ 1.62
LYSMD4-208ENST00000493256 LINC00271P0C7V0 271 aa25.16■■□□□ 1.62
LYSMD4-208ENST00000493256 KLRC1P26715 233 aa25.16■■□□□ 1.62
LYSMD4-208ENST00000493256 SWSAP1Q6NVH7 229 aa25.16■■□□□ 1.62
LYSMD4-208ENST00000493256 MIS18BP1Q6P0N0 1132 aa25.16■■□□□ 1.62
LYSMD4-208ENST00000493256 CELF4Q9BZC1 486 aaKnown RBP25.16■■□□□ 1.62
LYSMD4-208ENST00000493256 UBE2ZQ9H832 354 aaPredicted RBP25.16■■□□□ 1.62
LYSMD4-208ENST00000493256 VPS54Q9P1Q0 977 aa25.16■■□□□ 1.62
LYSMD4-208ENST00000493256 KDM3AQ9Y4C1 1321 aa25.15■■□□□ 1.62
LYSMD4-208ENST00000493256 ATP4AP20648 1035 aa25.15■■□□□ 1.62
LYSMD4-208ENST00000493256 CTNNB1P35222 781 aa25.15■■□□□ 1.62
LYSMD4-208ENST00000493256 TOB2Q14106 344 aaPredicted RBP25.15■■□□□ 1.62
LYSMD4-208ENST00000493256 PRR16Q569H4 304 aa25.15■■□□□ 1.62
LYSMD4-208ENST00000493256 RUFY3Q7L099 469 aa25.15■■□□□ 1.62
LYSMD4-208ENST00000493256 RTN4RL1Q86UN2 441 aaPredicted RBP25.15■■□□□ 1.62
LYSMD4-208ENST00000493256 NME8Q8N427 588 aa25.15■■□□□ 1.62
LYSMD4-208ENST00000493256 CCDC148Q8NFR7 591 aa25.15■■□□□ 1.62
LYSMD4-208ENST00000493256 BICD2Q8TD16 824 aa25.15■■□□□ 1.62
LYSMD4-208ENST00000493256 ZSWIM6Q9HCJ5 1215 aa25.15■■□□□ 1.62
LYSMD4-208ENST00000493256 TBC1D22BQ9NU19 505 aa25.15■■□□□ 1.62
LYSMD4-208ENST00000493256 PADI3Q9ULW8 664 aa25.15■■□□□ 1.62
LYSMD4-208ENST00000493256 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP25.14■■□□□ 1.62
LYSMD4-208ENST00000493256 ZBTB42B2RXF5 422 aa25.14■■□□□ 1.62
LYSMD4-208ENST00000493256 CIITAP33076 1130 aa25.14■■□□□ 1.62
LYSMD4-208ENST00000493256 KRT76Q01546 638 aa25.14■■□□□ 1.62
LYSMD4-208ENST00000493256 ZNF746Q6NUN9 644 aaPredicted RBP25.14■■□□□ 1.62
LYSMD4-208ENST00000493256 ZNF689Q96CS4 500 aaPredicted RBP25.14■■□□□ 1.62
LYSMD4-208ENST00000493256 FTHL17Q9BXU8 183 aa25.14■■□□□ 1.62
LYSMD4-208ENST00000493256 MYH9P35579 1960 aaKnown RBP25.14■■□□□ 1.61
LYSMD4-208ENST00000493256 COL1A2P08123 1366 aa25.14■■□□□ 1.61
LYSMD4-208ENST00000493256 EVPLQ92817 2033 aa25.13■■□□□ 1.61
LYSMD4-208ENST00000493256 EPB41L2O43491 1005 aaKnown RBP25.13■■□□□ 1.61
LYSMD4-208ENST00000493256 PAK2Q13177 524 aa25.13■■□□□ 1.61
LYSMD4-208ENST00000493256 TIGD5Q53EQ6 642 aa25.13■■□□□ 1.61
LYSMD4-208ENST00000493256 ZNF484Q5JVG2 852 aa25.13■■□□□ 1.61
LYSMD4-208ENST00000493256 KIAA0319LQ8IZA0 1049 aa25.13■■□□□ 1.61
LYSMD4-208ENST00000493256 CLP1Q92989 425 aaKnown RBP25.13■■□□□ 1.61
LYSMD4-208ENST00000493256 LENG9Q96B70 501 aa25.13■■□□□ 1.61
LYSMD4-208ENST00000493256 C5orf67F2Z3F1 127 aa25.12■■□□□ 1.61
LYSMD4-208ENST00000493256 EDIL3O43854 480 aa25.12■■□□□ 1.61
LYSMD4-208ENST00000493256 DGKIO75912 1065 aa25.12■■□□□ 1.61
LYSMD4-208ENST00000493256 BMPR1AP36894 532 aa25.12■■□□□ 1.61
LYSMD4-208ENST00000493256 BTG3Q14201 252 aaPredicted RBP25.12■■□□□ 1.61
LYSMD4-208ENST00000493256 CKAP2LQ8IYA6 745 aa25.12■■□□□ 1.61
LYSMD4-208ENST00000493256 SMAP1Q8IYB5 467 aaPredicted RBP25.12■■□□□ 1.61
LYSMD4-208ENST00000493256 CRIPAKQ8N1N5 446 aa25.12■■□□□ 1.61
LYSMD4-208ENST00000493256 BANK1Q8NDB2 785 aa25.12■■□□□ 1.61
LYSMD4-208ENST00000493256 MAFBQ9Y5Q3 323 aaPredicted RBP25.12■■□□□ 1.61
LYSMD4-208ENST00000493256 RB1P06400 928 aa25.11■■□□□ 1.61
LYSMD4-208ENST00000493256 KCNA5P22460 613 aa25.11■■□□□ 1.61
LYSMD4-208ENST00000493256 TMEM266Q2M3C6 531 aa25.11■■□□□ 1.61
LYSMD4-208ENST00000493256 NPAS4Q8IUM7 802 aa25.11■■□□□ 1.61
LYSMD4-208ENST00000493256 TMX1Q9H3N1 280 aa25.11■■□□□ 1.61
LYSMD4-208ENST00000493256 CDHR5Q9HBB8 845 aa25.11■■□□□ 1.61
LYSMD4-208ENST00000493256 SH3GLB2Q9NR46 395 aa25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms