RNA–Protein interactions for RNA: ENST00000492606.1

UBR4-215, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-215ENST00000492606 WDR78Q5VTH9 848 aa5.16□□□□□ -1.58
UBR4-215ENST00000492606 HIST2H2BCQ6DN03 193 aa5.16□□□□□ -1.58
UBR4-215ENST00000492606 SNRNP48Q6IEG0 339 aaKnown RBP5.16□□□□□ -1.58
UBR4-215ENST00000492606 KIAA1211LQ6NV74 962 aa5.16□□□□□ -1.58
UBR4-215ENST00000492606 KRT25Q7Z3Z0 450 aa5.16□□□□□ -1.58
UBR4-215ENST00000492606 TRIM22Q8IYM9 498 aa5.16□□□□□ -1.58
UBR4-215ENST00000492606 TTC16Q8NEE8 873 aa5.16□□□□□ -1.58
UBR4-215ENST00000492606 ABHD17AQ96GS6 310 aa5.16□□□□□ -1.58
UBR4-215ENST00000492606 TCF12Q99081 682 aa5.16□□□□□ -1.58
UBR4-215ENST00000492606 TGIF2Q9GZN2 237 aa5.16□□□□□ -1.58
UBR4-215ENST00000492606 CWC22Q9HCG8 908 aaKnown RBP5.16□□□□□ -1.58
UBR4-215ENST00000492606 HSPBP1Q9NZL4 362 aa5.16□□□□□ -1.58
UBR4-215ENST00000492606 DDX41Q9UJV9 622 aaKnown RBP5.16□□□□□ -1.58
UBR4-215ENST00000492606 NEUROG3Q9Y4Z2 214 aa5.16□□□□□ -1.58
UBR4-215ENST00000492606 CELSR1Q9NYQ6 3014 aa5.16□□□□□ -1.58
UBR4-215ENST00000492606 ATRQ13535 2644 aa5.16□□□□□ -1.58
UBR4-215ENST00000492606 AHCTF1Q8WYP5 2266 aa5.16□□□□□ -1.58
UBR4-215ENST00000492606 GNAT3A8MTJ3 354 aa5.15□□□□□ -1.59
UBR4-215ENST00000492606 SNAP23O00161 211 aa5.15□□□□□ -1.59
UBR4-215ENST00000492606 HYAL3O43820 417 aaPredicted RBP5.15□□□□□ -1.59
UBR4-215ENST00000492606 TBC1D4O60343 1298 aa5.15□□□□□ -1.59
UBR4-215ENST00000492606 GLP2RO95838 553 aa5.15□□□□□ -1.59
UBR4-215ENST00000492606 ASGR1P07306 291 aa5.15□□□□□ -1.59
UBR4-215ENST00000492606 DCNP07585 359 aaKnown RBP5.15□□□□□ -1.59
UBR4-215ENST00000492606 USP17L7P0C7H9 530 aa5.15□□□□□ -1.59
UBR4-215ENST00000492606 SNRPBP14678 240 aaKnown RBP5.15□□□□□ -1.59
UBR4-215ENST00000492606 GLULP15104 373 aa5.15□□□□□ -1.59
UBR4-215ENST00000492606 CES1P23141 567 aa5.15□□□□□ -1.59
UBR4-215ENST00000492606 TBC1D8BQ0IIM8 1120 aa5.15□□□□□ -1.59
UBR4-215ENST00000492606 CSRP2Q16527 193 aa5.15□□□□□ -1.59
UBR4-215ENST00000492606 TCTN1Q2MV58 587 aa5.15□□□□□ -1.59
UBR4-215ENST00000492606 ZNF394Q53GI3 561 aa5.15□□□□□ -1.59
UBR4-215ENST00000492606 FIGNL1Q6PIW4 674 aa5.15□□□□□ -1.59
UBR4-215ENST00000492606 RIPOR1Q6ZS17 1223 aa5.15□□□□□ -1.59
UBR4-215ENST00000492606 COPS6Q7L5N1 327 aa5.15□□□□□ -1.59
UBR4-215ENST00000492606 CEP120Q8N960 986 aa5.15□□□□□ -1.59
UBR4-215ENST00000492606 SLC43A3Q8NBI5 491 aa5.15□□□□□ -1.59
UBR4-215ENST00000492606 ZBTB44Q8NCP5 570 aa5.15□□□□□ -1.59
UBR4-215ENST00000492606 NEK1Q96PY6 1258 aa5.15□□□□□ -1.59
UBR4-215ENST00000492606 ACBD3Q9H3P7 528 aa5.15□□□□□ -1.59
UBR4-215ENST00000492606 TLR7Q9NYK1 1049 aaKnown RBP5.15□□□□□ -1.59
UBR4-215ENST00000492606 MARK1Q9P0L2 795 aa5.15□□□□□ -1.59
UBR4-215ENST00000492606 GMPR2Q9P2T1 348 aaKnown RBP5.15□□□□□ -1.59
UBR4-215ENST00000492606 FAM8A1Q9UBU6 413 aa5.15□□□□□ -1.59
UBR4-215ENST00000492606 MSRB2Q9Y3D2 182 aa5.15□□□□□ -1.59
UBR4-215ENST00000492606 GRIN2DO15399 1336 aa5.15□□□□□ -1.59
UBR4-215ENST00000492606 HIVEP1P15822 2718 aa5.14□□□□□ -1.59
UBR4-215ENST00000492606 ADGRG4Q8IZF6 3080 aa5.14□□□□□ -1.59
UBR4-215ENST00000492606 C2CD4DB7Z1M9 353 aa5.14□□□□□ -1.59
UBR4-215ENST00000492606 C2CD2LO14523 706 aa5.14□□□□□ -1.59
UBR4-215ENST00000492606 GRM6O15303 877 aa5.14□□□□□ -1.59
UBR4-215ENST00000492606 B4GALT4O60513 344 aa5.14□□□□□ -1.59
UBR4-215ENST00000492606 DIAPH1O60610 1272 aaKnown RBP5.14□□□□□ -1.59
UBR4-215ENST00000492606 GLRX3O76003 335 aaKnown RBP5.14□□□□□ -1.59
UBR4-215ENST00000492606 CSPG5O95196 566 aa5.14□□□□□ -1.59
UBR4-215ENST00000492606 MAP3K6O95382 1288 aa5.14□□□□□ -1.59
UBR4-215ENST00000492606 CD33P20138 364 aa5.14□□□□□ -1.59
UBR4-215ENST00000492606 ITGA6P23229 1130 aa5.14□□□□□ -1.59
UBR4-215ENST00000492606 KCNJ6P48051 423 aa5.14□□□□□ -1.59
UBR4-215ENST00000492606 ST13P50502 369 aaKnown RBP5.14□□□□□ -1.59
UBR4-215ENST00000492606 NOVA1P51513 510 aaKnown RBP5.14□□□□□ -1.59
UBR4-215ENST00000492606 IRX3P78415 501 aaPredicted RBP5.14□□□□□ -1.59
UBR4-215ENST00000492606 RBM10P98175 930 aaKnown RBP5.14□□□□□ -1.59
UBR4-215ENST00000492606 CFHR1Q03591 330 aa5.14□□□□□ -1.59
UBR4-215ENST00000492606 ZNF528Q3MIS6 628 aa5.14□□□□□ -1.59
UBR4-215ENST00000492606 TTC39BQ5VTQ0 682 aaPredicted RBP5.14□□□□□ -1.59
UBR4-215ENST00000492606 FKBP1CQ5VVH2 108 aa5.14□□□□□ -1.59
UBR4-215ENST00000492606 PCSK4Q6UW60 755 aa5.14□□□□□ -1.59
UBR4-215ENST00000492606 ADAMTSL4Q6UY14 1074 aa5.14□□□□□ -1.59
UBR4-215ENST00000492606 RAB44Q7Z6P3 723 aaPredicted RBP5.14□□□□□ -1.59
UBR4-215ENST00000492606 ADGRD2Q7Z7M1 963 aa5.14□□□□□ -1.59
UBR4-215ENST00000492606 ANKRD18AQ8IVF6 992 aa5.14□□□□□ -1.59
UBR4-215ENST00000492606 ATRIPQ8WXE1 791 aa5.14□□□□□ -1.59
UBR4-215ENST00000492606 PMEPA1Q969W9 287 aa5.14□□□□□ -1.59
UBR4-215ENST00000492606 BORCS6Q96GS4 357 aa5.14□□□□□ -1.59
UBR4-215ENST00000492606 ABCB6Q9NP58 842 aa5.14□□□□□ -1.59
UBR4-215ENST00000492606 COPRSQ9NQ92 184 aa5.14□□□□□ -1.59
UBR4-215ENST00000492606 RAXQ9Y2V3 346 aa5.14□□□□□ -1.59
UBR4-215ENST00000492606 PCDHGA2Q9Y5H1 932 aa5.14□□□□□ -1.59
UBR4-215ENST00000492606 PATJQ8NI35 1801 aa5.13□□□□□ -1.59
UBR4-215ENST00000492606 BOD1L1Q8NFC6 3051 aa5.13□□□□□ -1.59
UBR4-215ENST00000492606 NIPBLQ6KC79 2804 aaeCLIP5.13□□□□□ -1.599e-12■■□□□ 12.3
UBR4-215ENST00000492606 KRBA1A5PL33 1030 aa5.13□□□□□ -1.59
UBR4-215ENST00000492606 FAM221BA6H8Z2 402 aa5.13□□□□□ -1.59
UBR4-215ENST00000492606 LRP3O75074 770 aa5.13□□□□□ -1.59
UBR4-215ENST00000492606 ANXA1P04083 346 aa5.13□□□□□ -1.59
UBR4-215ENST00000492606 RETP07949 1114 aa5.13□□□□□ -1.59
UBR4-215ENST00000492606 ZNF865P0CJ78 1059 aaPredicted RBP5.13□□□□□ -1.59
UBR4-215ENST00000492606 RARAP10276 462 aa5.13□□□□□ -1.59
UBR4-215ENST00000492606 CYP2C9P11712 490 aa5.13□□□□□ -1.59
UBR4-215ENST00000492606 IL1R1P14778 569 aa5.13□□□□□ -1.59
UBR4-215ENST00000492606 NFKB1P19838 968 aa5.13□□□□□ -1.59
UBR4-215ENST00000492606 HOXA7P31268 230 aaPredicted RBP5.13□□□□□ -1.59
UBR4-215ENST00000492606 SOX18P35713 384 aa5.13□□□□□ -1.59
UBR4-215ENST00000492606 CSRP3P50461 194 aa5.13□□□□□ -1.59
UBR4-215ENST00000492606 CTBSQ01459 385 aa5.13□□□□□ -1.59
UBR4-215ENST00000492606 SCAPQ12770 1279 aa5.13□□□□□ -1.59
UBR4-215ENST00000492606 TCP10Q12799 353 aa5.13□□□□□ -1.59
UBR4-215ENST00000492606 STPG1Q5TH74 334 aa5.13□□□□□ -1.59
UBR4-215ENST00000492606 APOBEC3HQ6NTF7 200 aaKnown RBP5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms