RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 GNA11P29992 359 aa19.62■□□□□ 0.73
SGMS1-204ENST00000492601 PDIA3P30101 505 aaKnown RBP19.62■□□□□ 0.73
SGMS1-204ENST00000492601 AAK1Q2M2I8 961 aa19.62■□□□□ 0.73
SGMS1-204ENST00000492601 ABHD15Q6UXT9 468 aa19.62■□□□□ 0.73
SGMS1-204ENST00000492601 RUFY3Q7L099 469 aa19.62■□□□□ 0.73
SGMS1-204ENST00000492601 TNPO1Q92973 898 aaKnown RBP19.62■□□□□ 0.73
SGMS1-204ENST00000492601 NECAB3Q96P71 396 aaPredicted RBP19.62■□□□□ 0.73
SGMS1-204ENST00000492601 UHRF1Q96T88 793 aaPredicted RBP19.62■□□□□ 0.73
SGMS1-204ENST00000492601 RNF26Q9BY78 433 aaPredicted RBP19.62■□□□□ 0.73
SGMS1-204ENST00000492601 VPS54Q9P1Q0 977 aa19.62■□□□□ 0.73
SGMS1-204ENST00000492601 COG5Q9UP83 839 aa19.62■□□□□ 0.73
SGMS1-204ENST00000492601 DHX15O43143 795 aaKnown RBP19.61■□□□□ 0.73
SGMS1-204ENST00000492601 NEFLP07196 543 aa19.61■□□□□ 0.73
SGMS1-204ENST00000492601 BMP1P13497 986 aa19.61■□□□□ 0.73
SGMS1-204ENST00000492601 CD52P31358 61 aa19.61■□□□□ 0.73
SGMS1-204ENST00000492601 TOB2Q14106 344 aaPredicted RBP19.61■□□□□ 0.73
SGMS1-204ENST00000492601 EPC2Q52LR7 807 aa19.61■□□□□ 0.73
SGMS1-204ENST00000492601 IER5Q5VY09 327 aa19.61■□□□□ 0.73
SGMS1-204ENST00000492601 FAM160B1Q5W0V3 765 aa19.61■□□□□ 0.73
SGMS1-204ENST00000492601 TSHZ1Q6ZSZ6 1077 aa19.61■□□□□ 0.73
SGMS1-204ENST00000492601 CCDC60Q8IWA6 550 aaPredicted RBP19.61■□□□□ 0.73
SGMS1-204ENST00000492601 HLA-CQ95604 372 aa19.61■□□□□ 0.73
SGMS1-204ENST00000492601 LARP6Q9BRS8 491 aaKnown RBP19.61■□□□□ 0.73
SGMS1-204ENST00000492601 ZNF577Q9BSK1 485 aa19.61■□□□□ 0.73
SGMS1-204ENST00000492601 AGO3Q9H9G7 860 aaKnown RBP19.61■□□□□ 0.73
SGMS1-204ENST00000492601 PCDHA2Q9Y5H9 948 aa19.61■□□□□ 0.73
SGMS1-204ENST00000492601 COL4A6Q14031 1691 aa19.6■□□□□ 0.73
SGMS1-204ENST00000492601 IGKV6D-21A0A0A0MT36 114 aa19.6■□□□□ 0.73
SGMS1-204ENST00000492601 M0QZ92 97 aa19.6■□□□□ 0.73
SGMS1-204ENST00000492601 ENPP3O14638 875 aa19.6■□□□□ 0.73
SGMS1-204ENST00000492601 IFNAR1P17181 557 aa19.6■□□□□ 0.73
SGMS1-204ENST00000492601 PRR16Q569H4 304 aa19.6■□□□□ 0.73
SGMS1-204ENST00000492601 MCTP2Q6DN12 878 aa19.6■□□□□ 0.73
SGMS1-204ENST00000492601 SWSAP1Q6NVH7 229 aa19.6■□□□□ 0.73
SGMS1-204ENST00000492601 MTHFD1LQ6UB35 978 aa19.6■□□□□ 0.73
SGMS1-204ENST00000492601 CCDC148Q8NFR7 591 aa19.6■□□□□ 0.73
SGMS1-204ENST00000492601 IL17RAQ96F46 866 aa19.6■□□□□ 0.73
SGMS1-204ENST00000492601 ZSWIM6Q9HCJ5 1215 aa19.6■□□□□ 0.73
SGMS1-204ENST00000492601 ZNF302Q9NR11 478 aa19.6■□□□□ 0.73
SGMS1-204ENST00000492601 TRPV2Q9Y5S1 764 aa19.6■□□□□ 0.73
SGMS1-204ENST00000492601 CYP46A1Q9Y6A2 500 aa19.6■□□□□ 0.73
SGMS1-204ENST00000492601 RPLP2P05387 115 aaKnown RBP19.59■□□□□ 0.73
SGMS1-204ENST00000492601 SLC26A2P50443 739 aa19.59■□□□□ 0.73
SGMS1-204ENST00000492601 EVCP57679 992 aa19.59■□□□□ 0.73
SGMS1-204ENST00000492601 SETQ01105 290 aaPredicted RBP19.59■□□□□ 0.73
SGMS1-204ENST00000492601 MIS18BP1Q6P0N0 1132 aa19.59■□□□□ 0.73
SGMS1-204ENST00000492601 PDXDC2PQ6P474 469 aa19.59■□□□□ 0.73
SGMS1-204ENST00000492601 TRMT1LQ7Z2T5 733 aaKnown RBP19.59■□□□□ 0.73
SGMS1-204ENST00000492601 TMEM192Q8IY95 271 aa19.59■□□□□ 0.73
SGMS1-204ENST00000492601 BICD2Q8TD16 824 aa19.59■□□□□ 0.73
SGMS1-204ENST00000492601 ATP8B4Q8TF62 1192 aa19.59■□□□□ 0.73
SGMS1-204ENST00000492601 SAMD11Q96NU1 681 aa19.59■□□□□ 0.73
SGMS1-204ENST00000492601 HBP1O60381 514 aa19.58■□□□□ 0.72
SGMS1-204ENST00000492601 KLRC1P26715 233 aa19.58■□□□□ 0.72
SGMS1-204ENST00000492601 GPM6BQ13491 265 aa19.58■□□□□ 0.72
SGMS1-204ENST00000492601 CKAP2LQ8IYA6 745 aa19.58■□□□□ 0.72
SGMS1-204ENST00000492601 FIBCD1Q8N539 461 aa19.58■□□□□ 0.72
SGMS1-204ENST00000492601 LINC01599Q8WXQ3 324 aa19.58■□□□□ 0.72
SGMS1-204ENST00000492601 CELF4Q9BZC1 486 aaKnown RBP19.58■□□□□ 0.72
SGMS1-204ENST00000492601 UPF3BQ9BZI7 483 aaKnown RBP19.58■□□□□ 0.72
SGMS1-204ENST00000492601 TBC1D22BQ9NU19 505 aa19.58■□□□□ 0.72
SGMS1-204ENST00000492601 FNDC1Q4ZHG4 1894 aaPredicted RBP19.57■□□□□ 0.72
SGMS1-204ENST00000492601 SMIM35A0A1B0GVV1 85 aa19.57■□□□□ 0.72
SGMS1-204ENST00000492601 EPB41L2O43491 1005 aaKnown RBP19.57■□□□□ 0.72
SGMS1-204ENST00000492601 ATP4AP20648 1035 aa19.57■□□□□ 0.72
SGMS1-204ENST00000492601 STK3Q13188 491 aa19.57■□□□□ 0.72
SGMS1-204ENST00000492601 ZNF746Q6NUN9 644 aaPredicted RBP19.57■□□□□ 0.72
SGMS1-204ENST00000492601 TCEAL9Q9UHQ7 104 aa19.57■□□□□ 0.72
SGMS1-204ENST00000492601 PADI3Q9ULW8 664 aa19.57■□□□□ 0.72
SGMS1-204ENST00000492601 GINS2Q9Y248 185 aa19.57■□□□□ 0.72
SGMS1-204ENST00000492601 IGSF9BQ9UPX0 1349 aa19.56■□□□□ 0.72
SGMS1-204ENST00000492601 H3BNC9 293 aa19.56■□□□□ 0.72
SGMS1-204ENST00000492601 CPLX1O14810 134 aa19.56■□□□□ 0.72
SGMS1-204ENST00000492601 CTNNB1P35222 781 aa19.56■□□□□ 0.72
SGMS1-204ENST00000492601 NLRP5P59047 1200 aa19.56■□□□□ 0.72
SGMS1-204ENST00000492601 KRT76Q01546 638 aa19.56■□□□□ 0.72
SGMS1-204ENST00000492601 SSRP1Q08945 709 aaKnown RBP19.56■□□□□ 0.72
SGMS1-204ENST00000492601 PAK2Q13177 524 aa19.56■□□□□ 0.72
SGMS1-204ENST00000492601 TMEM266Q2M3C6 531 aa19.56■□□□□ 0.72
SGMS1-204ENST00000492601 ZNF484Q5JVG2 852 aa19.56■□□□□ 0.72
SGMS1-204ENST00000492601 RTN4RL1Q86UN2 441 aaPredicted RBP19.56■□□□□ 0.72
SGMS1-204ENST00000492601 TRIM22Q8IYM9 498 aa19.56■□□□□ 0.72
SGMS1-204ENST00000492601 NME8Q8N427 588 aa19.56■□□□□ 0.72
SGMS1-204ENST00000492601 LENG9Q96B70 501 aa19.56■□□□□ 0.72
SGMS1-204ENST00000492601 MRPL38Q96DV4 380 aaKnown RBP19.56■□□□□ 0.72
SGMS1-204ENST00000492601 SAMM50Q9Y512 469 aa19.56■□□□□ 0.72
SGMS1-204ENST00000492601 COL1A2P08123 1366 aa19.56■□□□□ 0.72
SGMS1-204ENST00000492601 ADGRA3Q8IWK6 1321 aa19.55■□□□□ 0.72
SGMS1-204ENST00000492601 ZBTB42B2RXF5 422 aa19.55■□□□□ 0.72
SGMS1-204ENST00000492601 EDIL3O43854 480 aa19.55■□□□□ 0.72
SGMS1-204ENST00000492601 IBSPP21815 317 aaPredicted RBP19.55■□□□□ 0.72
SGMS1-204ENST00000492601 CIITAP33076 1130 aa19.55■□□□□ 0.72
SGMS1-204ENST00000492601 PTPROQ16827 1216 aa19.55■□□□□ 0.72
SGMS1-204ENST00000492601 PPP1R16BQ96T49 567 aa19.55■□□□□ 0.72
SGMS1-204ENST00000492601 TM6SF1Q9BZW5 370 aa19.55■□□□□ 0.72
SGMS1-204ENST00000492601 RC3H2Q9HBD1 1191 aaKnown RBP19.55■□□□□ 0.72
SGMS1-204ENST00000492601 SH3GLB2Q9NR46 395 aa19.55■□□□□ 0.72
SGMS1-204ENST00000492601 GABBR1Q9UBS5 961 aa19.55■□□□□ 0.72
SGMS1-204ENST00000492601 PCDHA10Q9Y5I2 948 aa19.55■□□□□ 0.72
SGMS1-204ENST00000492601 SQORQ9Y6N5 450 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms