RNA–Protein interactions for RNA: ENST00000492571.1

TNFRSF9-203, Transcript of TNF receptor superfamily member 9, humanhuman

TSL 3

Gene TNFRSF9, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-203ENST00000492571 ICAM3P32942 547 aa11.24□□□□□ -0.61
TNFRSF9-203ENST00000492571 SP4Q02446 784 aa11.24□□□□□ -0.61
TNFRSF9-203ENST00000492571 IER5Q5VY09 327 aa11.24□□□□□ -0.61
TNFRSF9-203ENST00000492571 DIEXFQ68CQ4 756 aaKnown RBP11.24□□□□□ -0.61
TNFRSF9-203ENST00000492571 FBXL6Q8N531 539 aa11.24□□□□□ -0.61
TNFRSF9-203ENST00000492571 CUL5Q93034 780 aa11.24□□□□□ -0.61
TNFRSF9-203ENST00000492571 GPR20Q99678 358 aa11.24□□□□□ -0.61
TNFRSF9-203ENST00000492571 FTHL17Q9BXU8 183 aa11.24□□□□□ -0.61
TNFRSF9-203ENST00000492571 RTEL1Q9NZ71 1219 aa11.24□□□□□ -0.61
TNFRSF9-203ENST00000492571 WDFY4Q6ZS81 3184 aa11.23□□□□□ -0.61
TNFRSF9-203ENST00000492571 PNMA6FA0A0J9YX94 578 aa11.23□□□□□ -0.61
TNFRSF9-203ENST00000492571 OPLAHO14841 1288 aa11.23□□□□□ -0.61
TNFRSF9-203ENST00000492571 TBX10O75333 385 aa11.23□□□□□ -0.61
TNFRSF9-203ENST00000492571 DGKIO75912 1065 aa11.23□□□□□ -0.61
TNFRSF9-203ENST00000492571 EYA4O95677 639 aa11.23□□□□□ -0.61
TNFRSF9-203ENST00000492571 CHRNA1P02708 482 aa11.23□□□□□ -0.61
TNFRSF9-203ENST00000492571 SRGAP2BP0DMP2 458 aa11.23□□□□□ -0.61
TNFRSF9-203ENST00000492571 ZXDAP98168 799 aa11.23□□□□□ -0.61
TNFRSF9-203ENST00000492571 FOXK2Q01167 660 aa11.23□□□□□ -0.61
TNFRSF9-203ENST00000492571 PPFIA1Q13136 1202 aa11.23□□□□□ -0.61
TNFRSF9-203ENST00000492571 XRRA1Q6P2D8 792 aa11.23□□□□□ -0.61
TNFRSF9-203ENST00000492571 CWC27Q6UX04 472 aaKnown RBP11.23□□□□□ -0.61
TNFRSF9-203ENST00000492571 ZBTB33Q86T24 672 aa11.23□□□□□ -0.61
TNFRSF9-203ENST00000492571 STAG2Q8N3U4 1231 aa11.23□□□□□ -0.61
TNFRSF9-203ENST00000492571 EFHBQ8N7U6 833 aa11.23□□□□□ -0.61
TNFRSF9-203ENST00000492571 SMARCC2Q8TAQ2 1214 aa11.23□□□□□ -0.61
TNFRSF9-203ENST00000492571 LMBR1Q8WVP7 490 aa11.23□□□□□ -0.61
TNFRSF9-203ENST00000492571 GLG1Q92896 1179 aa11.23□□□□□ -0.61
TNFRSF9-203ENST00000492571 CDHR1Q96JP9 859 aa11.23□□□□□ -0.61
TNFRSF9-203ENST00000492571 INPP4AQ96PE3 977 aaPredicted RBP11.23□□□□□ -0.61
TNFRSF9-203ENST00000492571 SENP7Q9BQF6 1050 aa11.23□□□□□ -0.61
TNFRSF9-203ENST00000492571 AAASQ9NRG9 546 aa11.23□□□□□ -0.61
TNFRSF9-203ENST00000492571 ERAP1Q9NZ08 941 aa11.23□□□□□ -0.61
TNFRSF9-203ENST00000492571 LRFN2Q9ULH4 789 aa11.23□□□□□ -0.61
TNFRSF9-203ENST00000492571 SALL3Q9BXA9 1300 aa11.23□□□□□ -0.61
TNFRSF9-203ENST00000492571 SIP14410 1827 aa11.23□□□□□ -0.61
TNFRSF9-203ENST00000492571 LINC01565O15544 149 aa11.22□□□□□ -0.61
TNFRSF9-203ENST00000492571 GFRA3O60609 400 aa11.22□□□□□ -0.61
TNFRSF9-203ENST00000492571 NRIP1P48552 1158 aa11.22□□□□□ -0.61
TNFRSF9-203ENST00000492571 SIGLEC14Q08ET2 396 aa11.22□□□□□ -0.61
TNFRSF9-203ENST00000492571 COASYQ13057 564 aa11.22□□□□□ -0.61
TNFRSF9-203ENST00000492571 SART3Q15020 963 aaKnown RBP11.22□□□□□ -0.61
TNFRSF9-203ENST00000492571 SPOUT1Q5T280 376 aaKnown RBP11.22□□□□□ -0.61
TNFRSF9-203ENST00000492571 Q6ZNB5 142 aa11.22□□□□□ -0.61
TNFRSF9-203ENST00000492571 TSHZ1Q6ZSZ6 1077 aa11.22□□□□□ -0.61
TNFRSF9-203ENST00000492571 RBM23Q86U06 439 aaKnown RBP11.22□□□□□ -0.61
TNFRSF9-203ENST00000492571 CMTR2Q8IYT2 770 aaKnown RBP11.22□□□□□ -0.61
TNFRSF9-203ENST00000492571 SMRP1Q8NCR6 262 aa11.22□□□□□ -0.61
TNFRSF9-203ENST00000492571 IL31RAQ8NI17 732 aa11.22□□□□□ -0.61
TNFRSF9-203ENST00000492571 SEPT1Q8WYJ6 367 aa11.22□□□□□ -0.61
TNFRSF9-203ENST00000492571 ATOH1Q92858 354 aaPredicted RBP11.22□□□□□ -0.61
TNFRSF9-203ENST00000492571 GPKOWQ92917 476 aaPredicted RBP eCLIP11.22□□□□□ -0.61
TNFRSF9-203ENST00000492571 ZNF689Q96CS4 500 aaPredicted RBP11.22□□□□□ -0.61
TNFRSF9-203ENST00000492571 MTMR8Q96EF0 704 aa11.22□□□□□ -0.61
TNFRSF9-203ENST00000492571 RPGRIP1Q96KN7 1286 aa11.22□□□□□ -0.61
TNFRSF9-203ENST00000492571 DSCC1Q9BVC3 393 aa11.22□□□□□ -0.61
TNFRSF9-203ENST00000492571 PHF7Q9BWX1 381 aaPredicted RBP11.22□□□□□ -0.61
TNFRSF9-203ENST00000492571 TLE6Q9H808 572 aa11.22□□□□□ -0.61
TNFRSF9-203ENST00000492571 EHMT1Q9H9B1 1298 aa11.22□□□□□ -0.61
TNFRSF9-203ENST00000492571 TUBE1Q9UJT0 475 aa11.22□□□□□ -0.61
TNFRSF9-203ENST00000492571 PCDHB12Q9Y5F1 795 aa11.22□□□□□ -0.61
TNFRSF9-203ENST00000492571 PALM3A6NDB9 673 aaPredicted RBP11.21□□□□□ -0.61
TNFRSF9-203ENST00000492571 RRN3P2A6NIE6 340 aa11.21□□□□□ -0.61
TNFRSF9-203ENST00000492571 LOC730098B7Z3J9 87 aa11.21□□□□□ -0.61
TNFRSF9-203ENST00000492571 PPFIA3O75145 1194 aa11.21□□□□□ -0.61
TNFRSF9-203ENST00000492571 GTF2F1P35269 517 aaKnown RBP eCLIP11.21□□□□□ -0.61
TNFRSF9-203ENST00000492571 TCF7P36402 384 aaPredicted RBP11.21□□□□□ -0.61
TNFRSF9-203ENST00000492571 RRP1P56182 461 aaKnown RBP11.21□□□□□ -0.61
TNFRSF9-203ENST00000492571 ADAM17P78536 824 aa11.21□□□□□ -0.61
TNFRSF9-203ENST00000492571 LPIN1Q14693 890 aa11.21□□□□□ -0.61
TNFRSF9-203ENST00000492571 FBXO47Q5MNV8 452 aa11.21□□□□□ -0.61
TNFRSF9-203ENST00000492571 BLOC1S3Q6QNY0 202 aa11.21□□□□□ -0.61
TNFRSF9-203ENST00000492571 FAM43BQ6ZT52 329 aaPredicted RBP11.21□□□□□ -0.61
TNFRSF9-203ENST00000492571 TRIM50Q86XT4 487 aa11.21□□□□□ -0.61
TNFRSF9-203ENST00000492571 NPAS4Q8IUM7 802 aa11.21□□□□□ -0.61
TNFRSF9-203ENST00000492571 KLHL23Q8NBE8 558 aa11.21□□□□□ -0.61
TNFRSF9-203ENST00000492571 PRSS33Q8NF86 280 aa11.21□□□□□ -0.61
TNFRSF9-203ENST00000492571 SPPL3Q8TCT6 385 aa11.21□□□□□ -0.61
TNFRSF9-203ENST00000492571 POF1BQ8WVV4 589 aa11.21□□□□□ -0.61
TNFRSF9-203ENST00000492571 DNAJB3Q8WWF6 145 aa11.21□□□□□ -0.61
TNFRSF9-203ENST00000492571 MSLNLQ96KJ4 702 aa11.21□□□□□ -0.61
TNFRSF9-203ENST00000492571 PIGSQ96S52 555 aa11.21□□□□□ -0.61
TNFRSF9-203ENST00000492571 OSBPL7Q9BZF2 842 aa11.21□□□□□ -0.61
TNFRSF9-203ENST00000492571 SMARCAD1Q9H4L7 1026 aa11.21□□□□□ -0.61
TNFRSF9-203ENST00000492571 MAD2L2Q9UI95 211 aa11.21□□□□□ -0.61
TNFRSF9-203ENST00000492571 PCDHB3Q9Y5E6 796 aa11.21□□□□□ -0.61
TNFRSF9-203ENST00000492571 SQORQ9Y6N5 450 aa11.21□□□□□ -0.61
TNFRSF9-203ENST00000492571 COL4A6Q14031 1691 aa11.2□□□□□ -0.62
TNFRSF9-203ENST00000492571 PTPRSQ13332 1948 aa11.2□□□□□ -0.62
TNFRSF9-203ENST00000492571 IFIT3O14879 490 aaKnown RBP11.2□□□□□ -0.62
TNFRSF9-203ENST00000492571 PPP1R11O60927 126 aaPredicted RBP11.2□□□□□ -0.62
TNFRSF9-203ENST00000492571 ITGB1P05556 798 aa11.2□□□□□ -0.62
TNFRSF9-203ENST00000492571 MARK3P27448 753 aa11.2□□□□□ -0.62
TNFRSF9-203ENST00000492571 IGBP1P78318 339 aa11.2□□□□□ -0.62
TNFRSF9-203ENST00000492571 MRPS9P82933 396 aaKnown RBP11.2□□□□□ -0.62
TNFRSF9-203ENST00000492571 UBE3AQ05086 875 aa11.2□□□□□ -0.62
TNFRSF9-203ENST00000492571 PAK2Q13177 524 aa11.2□□□□□ -0.62
TNFRSF9-203ENST00000492571 GRIK4Q16099 956 aa11.2□□□□□ -0.62
TNFRSF9-203ENST00000492571 PAN2Q504Q3 1202 aaKnown RBP11.2□□□□□ -0.62
TNFRSF9-203ENST00000492571 PCNX4Q63HM2 1172 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms