RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 IPO9Q96P70 1041 aaKnown RBP4.23□□□□□ -1.73
HMGB1P30-201ENST00000492455 LMF1Q96S06 567 aa4.23□□□□□ -1.73
HMGB1P30-201ENST00000492455 ZFYVE21Q9BQ24 234 aa4.23□□□□□ -1.73
HMGB1P30-201ENST00000492455 PLAAQ9Y263 795 aa4.23□□□□□ -1.73
HMGB1P30-201ENST00000492455 PCDHA9Q9Y5H5 950 aa4.23□□□□□ -1.73
HMGB1P30-201ENST00000492455 PCDHA8Q9Y5H6 950 aa4.23□□□□□ -1.73
HMGB1P30-201ENST00000492455 GSG1L2A8MUP6 293 aa4.22□□□□□ -1.73
HMGB1P30-201ENST00000492455 C22orf46C9J442 243 aa4.22□□□□□ -1.73
HMGB1P30-201ENST00000492455 EFCAB14O75071 495 aa4.22□□□□□ -1.73
HMGB1P30-201ENST00000492455 CKMP06732 381 aa4.22□□□□□ -1.73
HMGB1P30-201ENST00000492455 VIL1P09327 827 aaKnown RBP4.22□□□□□ -1.73
HMGB1P30-201ENST00000492455 POU3F3P20264 500 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P30-201ENST00000492455 BCL6P41182 706 aa4.22□□□□□ -1.73
HMGB1P30-201ENST00000492455 MLLT6P55198 1093 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P30-201ENST00000492455 CSRP2Q16527 193 aa4.22□□□□□ -1.73
HMGB1P30-201ENST00000492455 ZNF568Q3ZCX4 644 aa4.22□□□□□ -1.73
HMGB1P30-201ENST00000492455 IGFL4Q6B9Z1 124 aa4.22□□□□□ -1.73
HMGB1P30-201ENST00000492455 IQCEQ6IPM2 695 aa4.22□□□□□ -1.73
HMGB1P30-201ENST00000492455 PCDH19Q8TAB3 1148 aa4.22□□□□□ -1.73
HMGB1P30-201ENST00000492455 PLEKHO2Q8TD55 490 aa4.22□□□□□ -1.73
HMGB1P30-201ENST00000492455 EDAQ92838 391 aa4.22□□□□□ -1.73
HMGB1P30-201ENST00000492455 MFSD3Q96ES6 412 aa4.22□□□□□ -1.73
HMGB1P30-201ENST00000492455 TOE1Q96GM8 510 aaKnown RBP4.22□□□□□ -1.73
HMGB1P30-201ENST00000492455 GNRHR2Q96P88 292 aa4.22□□□□□ -1.73
HMGB1P30-201ENST00000492455 LRRC37BQ96QE4 947 aa4.22□□□□□ -1.73
HMGB1P30-201ENST00000492455 TARS2Q9BW92 718 aaKnown RBP4.22□□□□□ -1.73
HMGB1P30-201ENST00000492455 FAM126AQ9BYI3 521 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P30-201ENST00000492455 PCDHA2Q9Y5H9 948 aa4.22□□□□□ -1.73
HMGB1P30-201ENST00000492455 TNPO3Q9Y5L0 923 aaKnown RBP4.22□□□□□ -1.73
HMGB1P30-201ENST00000492455 AQP7O14520 342 aa4.21□□□□□ -1.74
HMGB1P30-201ENST00000492455 WNT9AO14904 365 aa4.21□□□□□ -1.74
HMGB1P30-201ENST00000492455 FOXS1O43638 330 aa4.21□□□□□ -1.74
HMGB1P30-201ENST00000492455 COMTP21964 271 aa4.21□□□□□ -1.74
HMGB1P30-201ENST00000492455 FPR2P25090 351 aa4.21□□□□□ -1.74
HMGB1P30-201ENST00000492455 CANXP27824 592 aaKnown RBP4.21□□□□□ -1.74
HMGB1P30-201ENST00000492455 CHRNA2Q15822 529 aa4.21□□□□□ -1.74
HMGB1P30-201ENST00000492455 CR1LQ2VPA4 569 aa4.21□□□□□ -1.74
HMGB1P30-201ENST00000492455 MROH9Q5TGP6 573 aa4.21□□□□□ -1.74
HMGB1P30-201ENST00000492455 TCTN3Q6NUS6 607 aa4.21□□□□□ -1.74
HMGB1P30-201ENST00000492455 RNF180Q86T96 592 aa4.21□□□□□ -1.74
HMGB1P30-201ENST00000492455 TEX2Q8IWB9 1127 aa4.21□□□□□ -1.74
HMGB1P30-201ENST00000492455 IFNL3Q8IZI9 196 aa4.21□□□□□ -1.74
HMGB1P30-201ENST00000492455 ZCCHC14Q8WYQ9 949 aaKnown RBP4.21□□□□□ -1.74
HMGB1P30-201ENST00000492455 MTFR1LQ9H019 292 aa4.21□□□□□ -1.74
HMGB1P30-201ENST00000492455 INTS7Q9NVH2 962 aaKnown RBP4.21□□□□□ -1.74
HMGB1P30-201ENST00000492455 ADAM29Q9UKF5 820 aa4.21□□□□□ -1.74
HMGB1P30-201ENST00000492455 TIMM13Q9Y5L4 95 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P30-201ENST00000492455 ANKRD62A6NC57 917 aa4.2□□□□□ -1.74
HMGB1P30-201ENST00000492455 POU3F2P20265 443 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P30-201ENST00000492455 RPL11P62913 178 aaKnown RBP4.2□□□□□ -1.74
HMGB1P30-201ENST00000492455 GUCY1A3Q02108 690 aa4.2□□□□□ -1.74
HMGB1P30-201ENST00000492455 LSAMPQ13449 338 aa4.2□□□□□ -1.74
HMGB1P30-201ENST00000492455 HABP4Q5JVS0 413 aaKnown RBP4.2□□□□□ -1.74
HMGB1P30-201ENST00000492455 MRGPRGQ86SM5 289 aa4.2□□□□□ -1.74
HMGB1P30-201ENST00000492455 LRRTM3Q86VH5 581 aa4.2□□□□□ -1.74
HMGB1P30-201ENST00000492455 C1orf210Q8IVY1 113 aa4.2□□□□□ -1.74
HMGB1P30-201ENST00000492455 EXTL1Q92935 676 aa4.2□□□□□ -1.74
HMGB1P30-201ENST00000492455 VOPP1Q96AW1 172 aa4.2□□□□□ -1.74
HMGB1P30-201ENST00000492455 PLEKHG4BQ96PX9 1271 aa4.2□□□□□ -1.74
HMGB1P30-201ENST00000492455 IPPKQ9H8X2 491 aa4.2□□□□□ -1.74
HMGB1P30-201ENST00000492455 IFT57Q9NWB7 429 aa4.2□□□□□ -1.74
HMGB1P30-201ENST00000492455 MAGEC2Q9UBF1 373 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P30-201ENST00000492455 X6R8D5 127 aa4.2□□□□□ -1.74
HMGB1P30-201ENST00000492455 CNOT4O95628 575 aaKnown RBP4.19□□□□□ -1.74
HMGB1P30-201ENST00000492455 SOD2P04179 222 aa4.19□□□□□ -1.74
HMGB1P30-201ENST00000492455 ASLP04424 464 aa4.19□□□□□ -1.74
HMGB1P30-201ENST00000492455 MYCLP1P12525 358 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P30-201ENST00000492455 MAKP20794 623 aa4.19□□□□□ -1.74
HMGB1P30-201ENST00000492455 GRK2P25098 689 aa4.19□□□□□ -1.74
HMGB1P30-201ENST00000492455 GRK3P35626 688 aa4.19□□□□□ -1.74
HMGB1P30-201ENST00000492455 IGFALSP35858 605 aa4.19□□□□□ -1.74
HMGB1P30-201ENST00000492455 STAT3P40763 770 aa4.19□□□□□ -1.74
HMGB1P30-201ENST00000492455 PCBP1Q15365 356 aaKnown RBP eCLIP4.19□□□□□ -1.74
HMGB1P30-201ENST00000492455 SEPT7Q16181 437 aaKnown RBP4.19□□□□□ -1.74
HMGB1P30-201ENST00000492455 KIZQ2M2Z5 673 aa4.19□□□□□ -1.74
HMGB1P30-201ENST00000492455 KRTAP15-1Q3LI76 137 aa4.19□□□□□ -1.74
HMGB1P30-201ENST00000492455 FILIP1Q7Z7B0 1213 aa4.19□□□□□ -1.74
HMGB1P30-201ENST00000492455 MTDHQ86UE4 582 aaKnown RBP4.19□□□□□ -1.74
HMGB1P30-201ENST00000492455 RIOX2Q8IUF8 465 aa4.19□□□□□ -1.74
HMGB1P30-201ENST00000492455 FAM89AQ96GI7 184 aa4.19□□□□□ -1.74
HMGB1P30-201ENST00000492455 MAGEB10Q96LZ2 347 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P30-201ENST00000492455 JAM3Q9BX67 310 aa4.19□□□□□ -1.74
HMGB1P30-201ENST00000492455 CLDND1Q9NY35 253 aa4.19□□□□□ -1.74
HMGB1P30-201ENST00000492455 DTLQ9NZJ0 730 aa4.19□□□□□ -1.74
HMGB1P30-201ENST00000492455 CBLCQ9ULV8 474 aa4.19□□□□□ -1.74
HMGB1P30-201ENST00000492455 ZNF652Q9Y2D9 606 aa4.19□□□□□ -1.74
HMGB1P30-201ENST00000492455 COA3Q9Y2R0 106 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P30-201ENST00000492455 COQ6Q9Y2Z9 468 aa4.19□□□□□ -1.74
HMGB1P30-201ENST00000492455 PRKAB1Q9Y478 270 aa4.19□□□□□ -1.74
HMGB1P30-201ENST00000492455 SLC4A7Q9Y6M7 1214 aa4.19□□□□□ -1.74
HMGB1P30-201ENST00000492455 TCRBV5S4A2TA0A5A2 114 aa4.18□□□□□ -1.74
HMGB1P30-201ENST00000492455 H7BY64 318 aa4.18□□□□□ -1.74
HMGB1P30-201ENST00000492455 OPA1O60313 960 aa4.18□□□□□ -1.74
HMGB1P30-201ENST00000492455 PDE8AO60658 829 aa4.18□□□□□ -1.74
HMGB1P30-201ENST00000492455 GLRX3O76003 335 aaKnown RBP4.18□□□□□ -1.74
HMGB1P30-201ENST00000492455 MECP2P51608 486 aaKnown RBP4.18□□□□□ -1.74
HMGB1P30-201ENST00000492455 DGCR2P98153 550 aa4.18□□□□□ -1.74
HMGB1P30-201ENST00000492455 AMPD3Q01432 767 aa4.18□□□□□ -1.74
HMGB1P30-201ENST00000492455 PAK1Q13153 545 aa4.18□□□□□ -1.74
HMGB1P30-201ENST00000492455 FSTL4Q6MZW2 842 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms