RNA–Protein interactions for RNA: ENST00000491802.1

CPNE9-204, Transcript of copine family member 9, humanhuman

TSL 4

Gene CPNE9, Length 584 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-204ENST00000491802 ZNF365Q70YC5 407 aa26.19■■□□□ 1.78
CPNE9-204ENST00000491802 LRRC8DQ7L1W4 858 aa26.19■■□□□ 1.78
CPNE9-204ENST00000491802 HSCBQ8IWL3 235 aa26.19■■□□□ 1.78
CPNE9-204ENST00000491802 HERVK_113Q902F9 699 aa26.19■■□□□ 1.78
CPNE9-204ENST00000491802 RNPC3Q96LT9 517 aaKnown RBP26.19■■□□□ 1.78
CPNE9-204ENST00000491802 TET1Q8NFU7 2136 aa26.18■■□□□ 1.78
CPNE9-204ENST00000491802 ACRP10323 421 aa26.18■■□□□ 1.78
CPNE9-204ENST00000491802 ATP4AP20648 1035 aa26.18■■□□□ 1.78
CPNE9-204ENST00000491802 THPOP40225 353 aa26.18■■□□□ 1.78
CPNE9-204ENST00000491802 TRAPPC10P48553 1259 aa26.18■■□□□ 1.78
CPNE9-204ENST00000491802 UGCGQ16739 394 aa26.18■■□□□ 1.78
CPNE9-204ENST00000491802 TTC38Q5R3I4 469 aa26.18■■□□□ 1.78
CPNE9-204ENST00000491802 LARP1BQ659C4 914 aaKnown RBP26.18■■□□□ 1.78
CPNE9-204ENST00000491802 RPAINQ86UA6 219 aa26.18■■□□□ 1.78
CPNE9-204ENST00000491802 TRAPPC12Q8WVT3 735 aa26.18■■□□□ 1.78
CPNE9-204ENST00000491802 LAMA2P24043 3122 aaKnown RBP26.18■■□□□ 1.78
CPNE9-204ENST00000491802 MBLAC1A4D2B0 266 aaPredicted RBP26.17■■□□□ 1.78
CPNE9-204ENST00000491802 RRN3P2A6NIE6 340 aa26.17■■□□□ 1.78
CPNE9-204ENST00000491802 HBP1O60381 514 aa26.17■■□□□ 1.78
CPNE9-204ENST00000491802 MARCH8Q5T0T0 291 aa26.17■■□□□ 1.78
CPNE9-204ENST00000491802 TRAF7Q6Q0C0 670 aa26.17■■□□□ 1.78
CPNE9-204ENST00000491802 RUFY4Q6ZNE9 571 aa26.17■■□□□ 1.78
CPNE9-204ENST00000491802 TRMT1LQ7Z2T5 733 aaKnown RBP26.17■■□□□ 1.78
CPNE9-204ENST00000491802 ZBTB10Q96DT7 871 aa26.17■■□□□ 1.78
CPNE9-204ENST00000491802 INTS4Q96HW7 963 aaKnown RBP26.17■■□□□ 1.78
CPNE9-204ENST00000491802 MTIF3Q9H2K0 278 aaKnown RBP26.17■■□□□ 1.78
CPNE9-204ENST00000491802 FOXD4L1Q9NU39 408 aa26.17■■□□□ 1.78
CPNE9-204ENST00000491802 EML1O00423 815 aa26.16■■□□□ 1.78
CPNE9-204ENST00000491802 ZNF862O60290 1169 aa26.16■■□□□ 1.78
CPNE9-204ENST00000491802 FGBP02675 491 aa26.16■■□□□ 1.78
CPNE9-204ENST00000491802 CXCL10P02778 98 aa26.16■■□□□ 1.78
CPNE9-204ENST00000491802 SMAD3P84022 425 aaKnown RBP26.16■■□□□ 1.78
CPNE9-204ENST00000491802 PRKCEQ02156 737 aa26.16■■□□□ 1.78
CPNE9-204ENST00000491802 ORC2Q13416 577 aaPredicted RBP26.16■■□□□ 1.78
CPNE9-204ENST00000491802 ZNF174Q15697 407 aa26.16■■□□□ 1.78
CPNE9-204ENST00000491802 ZNF618Q5T7W0 954 aa26.16■■□□□ 1.78
CPNE9-204ENST00000491802 NCAPH2Q6IBW4 605 aa26.16■■□□□ 1.78
CPNE9-204ENST00000491802 TAF2Q6P1X5 1199 aa26.16■■□□□ 1.78
CPNE9-204ENST00000491802 DEFB128Q7Z7B8 93 aa26.16■■□□□ 1.78
CPNE9-204ENST00000491802 BBXQ8WY36 941 aaPredicted RBP26.16■■□□□ 1.78
CPNE9-204ENST00000491802 FAM167AQ96KS9 214 aa26.16■■□□□ 1.78
CPNE9-204ENST00000491802 TMEM60Q9H2L4 133 aa26.16■■□□□ 1.78
CPNE9-204ENST00000491802 SLC34A2O95436 690 aa26.15■■□□□ 1.78
CPNE9-204ENST00000491802 OATP04181 439 aa26.15■■□□□ 1.78
CPNE9-204ENST00000491802 RPLP2P05387 115 aaKnown RBP26.15■■□□□ 1.78
CPNE9-204ENST00000491802 SPIRE1Q08AE8 756 aa26.15■■□□□ 1.78
CPNE9-204ENST00000491802 NBR1Q14596 966 aa26.15■■□□□ 1.78
CPNE9-204ENST00000491802 LRCH3Q96II8 777 aa26.15■■□□□ 1.78
CPNE9-204ENST00000491802 MTMR9Q96QG7 549 aa26.15■■□□□ 1.78
CPNE9-204ENST00000491802 COL1A2P08123 1366 aa26.15■■□□□ 1.78
CPNE9-204ENST00000491802 CTSHP09668 335 aa26.14■■□□□ 1.78
CPNE9-204ENST00000491802 TXKP42681 527 aa26.14■■□□□ 1.78
CPNE9-204ENST00000491802 GPNMBQ14956 572 aa26.14■■□□□ 1.78
CPNE9-204ENST00000491802 ZNF484Q5JVG2 852 aa26.14■■□□□ 1.78
CPNE9-204ENST00000491802 BANK1Q8NDB2 785 aa26.14■■□□□ 1.78
CPNE9-204ENST00000491802 TTC12Q9H892 705 aaPredicted RBP26.14■■□□□ 1.78
CPNE9-204ENST00000491802 VPS37CA5D8V6 355 aaPredicted RBP26.13■■□□□ 1.77
CPNE9-204ENST00000491802 PDCP20941 246 aa26.13■■□□□ 1.77
CPNE9-204ENST00000491802 TOB1P50616 345 aaPredicted RBP26.13■■□□□ 1.77
CPNE9-204ENST00000491802 FAM109BQ6ICB4 259 aaPredicted RBP26.13■■□□□ 1.77
CPNE9-204ENST00000491802 PCDHA12Q9UN75 941 aa26.13■■□□□ 1.77
CPNE9-204ENST00000491802 HSFX4A0A1B0GTS1 333 aaPredicted RBP26.12■■□□□ 1.77
CPNE9-204ENST00000491802 HSFX3A0A1B0GWH4 333 aaPredicted RBP26.12■■□□□ 1.77
CPNE9-204ENST00000491802 RSPH10B2B2RC85 870 aa26.12■■□□□ 1.77
CPNE9-204ENST00000491802 ZBTB42B2RXF5 422 aa26.12■■□□□ 1.77
CPNE9-204ENST00000491802 OR52Z1P0C646 297 aa26.12■■□□□ 1.77
CPNE9-204ENST00000491802 RSPH10BP0C881 870 aa26.12■■□□□ 1.77
CPNE9-204ENST00000491802 FAM26DQ5JW98 314 aa26.12■■□□□ 1.77
CPNE9-204ENST00000491802 MTHFD1LQ6UB35 978 aa26.12■■□□□ 1.77
CPNE9-204ENST00000491802 FAM49AQ9H0Q0 323 aaPredicted RBP26.12■■□□□ 1.77
CPNE9-204ENST00000491802 CEP131Q9UPN4 1083 aa26.12■■□□□ 1.77
CPNE9-204ENST00000491802 NBNO60934 754 aa26.11■■□□□ 1.77
CPNE9-204ENST00000491802 ACTN1P12814 892 aa26.11■■□□□ 1.77
CPNE9-204ENST00000491802 PSMC5P62195 406 aa26.11■■□□□ 1.77
CPNE9-204ENST00000491802 MBTPS1Q14703 1052 aa26.11■■□□□ 1.77
CPNE9-204ENST00000491802 EPHA7Q15375 998 aa26.11■■□□□ 1.77
CPNE9-204ENST00000491802 RSPH3Q86UC2 560 aa26.11■■□□□ 1.77
CPNE9-204ENST00000491802 DNAJB3Q8WWF6 145 aa26.11■■□□□ 1.77
CPNE9-204ENST00000491802 FTOQ9C0B1 505 aaKnown RBP eCLIP26.11■■□□□ 1.77
CPNE9-204ENST00000491802 NRBP2Q9NSY0 501 aa26.11■■□□□ 1.77
CPNE9-204ENST00000491802 SEPT9Q9UHD8 586 aaPredicted RBP26.11■■□□□ 1.77
CPNE9-204ENST00000491802 PCDHB6Q9Y5E3 794 aa26.11■■□□□ 1.77
CPNE9-204ENST00000491802 PCDHA2Q9Y5H9 948 aa26.11■■□□□ 1.77
CPNE9-204ENST00000491802 SIP14410 1827 aa26.1■■□□□ 1.77
CPNE9-204ENST00000491802 BAIAP3O94812 1187 aa26.1■■□□□ 1.77
CPNE9-204ENST00000491802 KLRC1P26715 233 aa26.1■■□□□ 1.77
CPNE9-204ENST00000491802 QARSP47897 775 aaKnown RBP26.1■■□□□ 1.77
CPNE9-204ENST00000491802 RILPL1Q5EBL4 403 aa26.1■■□□□ 1.77
CPNE9-204ENST00000491802 OTOP2Q7RTS6 562 aa26.1■■□□□ 1.77
CPNE9-204ENST00000491802 CXXC1Q9P0U4 656 aaPredicted RBP26.1■■□□□ 1.77
CPNE9-204ENST00000491802 POTEMA6NI47 508 aa26.09■■□□□ 1.77
CPNE9-204ENST00000491802 C22orf31O95567 290 aa26.09■■□□□ 1.77
CPNE9-204ENST00000491802 P4HBP07237 508 aaKnown RBP26.09■■□□□ 1.77
CPNE9-204ENST00000491802 XKR3Q5GH77 459 aa26.09■■□□□ 1.77
CPNE9-204ENST00000491802 LXNQ9BS40 222 aa26.09■■□□□ 1.77
CPNE9-204ENST00000491802 TMEM265A0A087WTH1 108 aa26.08■■□□□ 1.77
CPNE9-204ENST00000491802 SMIM35A0A1B0GVV1 85 aa26.08■■□□□ 1.77
CPNE9-204ENST00000491802 TMEM150BA6NC51 233 aa26.08■■□□□ 1.77
CPNE9-204ENST00000491802 RBAK-RBAKDNI3L0D1 243 aa26.08■■□□□ 1.77
CPNE9-204ENST00000491802 DKC1O60832 514 aaKnown RBP eCLIP26.08■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms