RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 TLR10Q9BXR5 811 aa12.21□□□□□ -0.46
CRNKL1-204ENST00000490910 CORO1CQ9ULV4 474 aaPredicted RBP12.21□□□□□ -0.46
CRNKL1-204ENST00000490910 MROH5Q6ZUA9 1318 aa12.2□□□□□ -0.46
CRNKL1-204ENST00000490910 ASAP2O43150 1006 aa12.2□□□□□ -0.46
CRNKL1-204ENST00000490910 PDE8AO60658 829 aa12.2□□□□□ -0.46
CRNKL1-204ENST00000490910 AFPP02771 609 aaKnown RBP12.2□□□□□ -0.46
CRNKL1-204ENST00000490910 LDHCP07864 332 aa12.2□□□□□ -0.46
CRNKL1-204ENST00000490910 CA4P22748 312 aa12.2□□□□□ -0.46
CRNKL1-204ENST00000490910 UNC13DQ70J99 1090 aa12.2□□□□□ -0.46
CRNKL1-204ENST00000490910 MREGQ8N565 214 aa12.2□□□□□ -0.46
CRNKL1-204ENST00000490910 LZTS2Q9BRK4 669 aa12.2□□□□□ -0.46
CRNKL1-204ENST00000490910 RGL1Q9NZL6 768 aa12.2□□□□□ -0.46
CRNKL1-204ENST00000490910 ARHGAP20Q9P2F6 1191 aa12.2□□□□□ -0.46
CRNKL1-204ENST00000490910 BIN2Q9UBW5 565 aaPredicted RBP12.2□□□□□ -0.46
CRNKL1-204ENST00000490910 REXO2Q9Y3B8 237 aaKnown RBP12.2□□□□□ -0.46
CRNKL1-204ENST00000490910 KIF20BQ96Q89 1820 aa12.2□□□□□ -0.46
CRNKL1-204ENST00000490910 GFPT2O94808 682 aa12.2□□□□□ -0.46
CRNKL1-204ENST00000490910 SPARCL1Q14515 664 aa12.2□□□□□ -0.46
CRNKL1-204ENST00000490910 MEA1Q16626 185 aa12.2□□□□□ -0.46
CRNKL1-204ENST00000490910 RILPQ96NA2 401 aa12.2□□□□□ -0.46
CRNKL1-204ENST00000490910 OLFM3Q96PB7 478 aa12.2□□□□□ -0.46
CRNKL1-204ENST00000490910 TMEM60Q9H2L4 133 aa12.2□□□□□ -0.46
CRNKL1-204ENST00000490910 DNAJC17Q9NVM6 304 aaKnown RBP12.2□□□□□ -0.46
CRNKL1-204ENST00000490910 ZFP69BQ9UJL9 534 aa12.2□□□□□ -0.46
CRNKL1-204ENST00000490910 PCP11498 1178 aaKnown RBP12.2□□□□□ -0.46
CRNKL1-204ENST00000490910 ALDH5A1P51649 535 aaPredicted RBP12.2□□□□□ -0.46
CRNKL1-204ENST00000490910 WLSQ5T9L3 541 aa12.2□□□□□ -0.46
CRNKL1-204ENST00000490910 ARHGAP22Q7Z5H3 698 aa12.2□□□□□ -0.46
CRNKL1-204ENST00000490910 BBOF1Q8ND07 529 aa12.2□□□□□ -0.46
CRNKL1-204ENST00000490910 KIFAP3Q92845 792 aa12.2□□□□□ -0.46
CRNKL1-204ENST00000490910 ERP27Q96DN0 273 aa12.2□□□□□ -0.46
CRNKL1-204ENST00000490910 PHF20Q9BVI0 1012 aa12.2□□□□□ -0.46
CRNKL1-204ENST00000490910 ARAP3Q8WWN8 1544 aa12.2□□□□□ -0.46
CRNKL1-204ENST00000490910 USP31Q70CQ4 1352 aa12.2□□□□□ -0.46
CRNKL1-204ENST00000490910 ROBO2Q9HCK4 1378 aa12.2□□□□□ -0.46
CRNKL1-204ENST00000490910 NEXMIFQ5QGS0 1516 aa12.19□□□□□ -0.46
CRNKL1-204ENST00000490910 PCCAP05165 728 aaPredicted RBP12.19□□□□□ -0.46
CRNKL1-204ENST00000490910 FGFR4P22455 802 aa12.19□□□□□ -0.46
CRNKL1-204ENST00000490910 PROM2Q8N271 834 aa12.19□□□□□ -0.46
CRNKL1-204ENST00000490910 CELF4Q9BZC1 486 aaKnown RBP12.19□□□□□ -0.46
CRNKL1-204ENST00000490910 MIS12Q9H081 205 aa12.19□□□□□ -0.46
CRNKL1-204ENST00000490910 Q9H521 79 aa12.19□□□□□ -0.46
CRNKL1-204ENST00000490910 DBR1Q9UK59 544 aaKnown RBP12.19□□□□□ -0.46
CRNKL1-204ENST00000490910 DENND2AQ9ULE3 1009 aa12.19□□□□□ -0.46
CRNKL1-204ENST00000490910 GCNT3O95395 438 aa12.19□□□□□ -0.46
CRNKL1-204ENST00000490910 HOXA7P31268 230 aaPredicted RBP12.19□□□□□ -0.46
CRNKL1-204ENST00000490910 STK4Q13043 487 aa12.19□□□□□ -0.46
CRNKL1-204ENST00000490910 ZNF211Q13398 564 aaPredicted RBP12.19□□□□□ -0.46
CRNKL1-204ENST00000490910 DHX34Q14147 1143 aaKnown RBP12.19□□□□□ -0.46
CRNKL1-204ENST00000490910 LLGL1Q15334 1064 aa12.19□□□□□ -0.46
CRNKL1-204ENST00000490910 KIAA1755Q5JYT7 1200 aa12.19□□□□□ -0.46
CRNKL1-204ENST00000490910 GUF1Q8N442 669 aaKnown RBP12.19□□□□□ -0.46
CRNKL1-204ENST00000490910 ZCRB1Q8TBF4 217 aaKnown RBP12.19□□□□□ -0.46
CRNKL1-204ENST00000490910 BICD1Q96G01 975 aa12.19□□□□□ -0.46
CRNKL1-204ENST00000490910 CYTH2Q99418 400 aa12.19□□□□□ -0.46
CRNKL1-204ENST00000490910 TRIM9Q9C026 710 aa12.19□□□□□ -0.46
CRNKL1-204ENST00000490910 RASA4BC9J798 803 aa12.19□□□□□ -0.46
CRNKL1-204ENST00000490910 RASA4O43374 803 aa12.19□□□□□ -0.46
CRNKL1-204ENST00000490910 USP11P51784 963 aa12.19□□□□□ -0.46
CRNKL1-204ENST00000490910 ROR2Q01974 943 aaKnown RBP12.19□□□□□ -0.46
CRNKL1-204ENST00000490910 KLHDC7AQ5VTJ3 777 aa12.19□□□□□ -0.46
CRNKL1-204ENST00000490910 MTMR8Q96EF0 704 aa12.19□□□□□ -0.46
CRNKL1-204ENST00000490910 ANAPC5Q9UJX4 755 aa12.19□□□□□ -0.46
CRNKL1-204ENST00000490910 SYNGAP1Q96PV0 1343 aa12.19□□□□□ -0.46
CRNKL1-204ENST00000490910 KDM3AQ9Y4C1 1321 aa12.19□□□□□ -0.46
CRNKL1-204ENST00000490910 HNRNPCP07910 306 aaKnown RBP eCLIP12.19□□□□□ -0.46
CRNKL1-204ENST00000490910 PHKG2P15735 406 aa12.19□□□□□ -0.46
CRNKL1-204ENST00000490910 FNTAP49354 379 aa12.19□□□□□ -0.46
CRNKL1-204ENST00000490910 SLC29A2Q14542 456 aa12.19□□□□□ -0.46
CRNKL1-204ENST00000490910 NTRK3Q16288 839 aa12.19□□□□□ -0.46
CRNKL1-204ENST00000490910 SGO2Q562F6 1265 aa12.19□□□□□ -0.46
CRNKL1-204ENST00000490910 ZNF662Q6ZS27 426 aa12.19□□□□□ -0.46
CRNKL1-204ENST00000490910 MAEAQ7L5Y9 396 aa12.19□□□□□ -0.46
CRNKL1-204ENST00000490910 EPM2AIP1Q7L775 607 aaPredicted RBP12.19□□□□□ -0.46
CRNKL1-204ENST00000490910 NAP1L4Q99733 375 aaKnown RBP12.19□□□□□ -0.46
CRNKL1-204ENST00000490910 OSBPL7Q9BZF2 842 aa12.19□□□□□ -0.46
CRNKL1-204ENST00000490910 PVALEFA0A1B0GWK0 134 aa12.18□□□□□ -0.46
CRNKL1-204ENST00000490910 TMEM120BA0PK00 339 aa12.18□□□□□ -0.46
CRNKL1-204ENST00000490910 RCCD1A6NED2 376 aa12.18□□□□□ -0.46
CRNKL1-204ENST00000490910 RNF225M0QZC1 329 aaPredicted RBP12.18□□□□□ -0.46
CRNKL1-204ENST00000490910 GSTA2P09210 222 aa12.18□□□□□ -0.46
CRNKL1-204ENST00000490910 ADCY7P51828 1080 aa12.18□□□□□ -0.46
CRNKL1-204ENST00000490910 SNX1Q13596 522 aa12.18□□□□□ -0.46
CRNKL1-204ENST00000490910 SYT2Q8N9I0 419 aaPredicted RBP12.18□□□□□ -0.46
CRNKL1-204ENST00000490910 PIGOQ8TEQ8 1089 aa12.18□□□□□ -0.46
CRNKL1-204ENST00000490910 TCHPQ9BT92 498 aa12.18□□□□□ -0.46
CRNKL1-204ENST00000490910 PABPC3Q9H361 631 aaKnown RBP12.18□□□□□ -0.46
CRNKL1-204ENST00000490910 GREM2Q9H772 168 aa12.18□□□□□ -0.46
CRNKL1-204ENST00000490910 MROH2AA6NES4 1674 aa12.18□□□□□ -0.46
CRNKL1-204ENST00000490910 HECW2Q9P2P5 1572 aa12.18□□□□□ -0.46
CRNKL1-204ENST00000490910 ZCCHC11Q5TAX3 1644 aaKnown RBP12.18□□□□□ -0.46
CRNKL1-204ENST00000490910 EXOC1LA0A1B0GW35 172 aa12.18□□□□□ -0.46
CRNKL1-204ENST00000490910 DNM1LO00429 736 aa12.18□□□□□ -0.46
CRNKL1-204ENST00000490910 TRHP20396 242 aaPredicted RBP12.18□□□□□ -0.46
CRNKL1-204ENST00000490910 ATP4AP20648 1035 aa12.18□□□□□ -0.46
CRNKL1-204ENST00000490910 CHRNA3P32297 505 aa12.18□□□□□ -0.46
CRNKL1-204ENST00000490910 MAN1A1P33908 653 aa12.18□□□□□ -0.46
CRNKL1-204ENST00000490910 CTSWP56202 376 aa12.18□□□□□ -0.46
CRNKL1-204ENST00000490910 ERVK-9P63128 1117 aa12.18□□□□□ -0.46
CRNKL1-204ENST00000490910 PDE1CQ14123 709 aaPredicted RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms