RNA–Protein interactions for RNA: ENST00000490869.1

UBA1-209, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

TSL 2

Gene UBA1, Length 917 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-209ENST00000490869 SMIM35A0A1B0GVV1 85 aa12.38□□□□□ -0.43
UBA1-209ENST00000490869 HBP1O60381 514 aa12.38□□□□□ -0.43
UBA1-209ENST00000490869 TMEM62Q0P6H9 643 aa12.38□□□□□ -0.43
UBA1-209ENST00000490869 PRR16Q569H4 304 aa12.38□□□□□ -0.43
UBA1-209ENST00000490869 MIS18BP1Q6P0N0 1132 aa12.38□□□□□ -0.43
UBA1-209ENST00000490869 PDXDC2PQ6P474 469 aa12.38□□□□□ -0.43
UBA1-209ENST00000490869 MTHFD1LQ6UB35 978 aa12.38□□□□□ -0.43
UBA1-209ENST00000490869 CCDC60Q8IWA6 550 aaPredicted RBP12.38□□□□□ -0.43
UBA1-209ENST00000490869 TRIM22Q8IYM9 498 aa12.38□□□□□ -0.43
UBA1-209ENST00000490869 ATP8B4Q8TF62 1192 aa12.38□□□□□ -0.43
UBA1-209ENST00000490869 SAMD11Q96NU1 681 aa12.38□□□□□ -0.43
UBA1-209ENST00000490869 UPF3BQ9BZI7 483 aaKnown RBP12.38□□□□□ -0.43
UBA1-209ENST00000490869 ZNF302Q9NR11 478 aa12.38□□□□□ -0.43
UBA1-209ENST00000490869 TBC1D22BQ9NU19 505 aa12.38□□□□□ -0.43
UBA1-209ENST00000490869 COG5Q9UP83 839 aa12.38□□□□□ -0.43
UBA1-209ENST00000490869 KAT6AQ92794 2004 aa12.38□□□□□ -0.43
UBA1-209ENST00000490869 TNFRSF10AO00220 468 aa12.37□□□□□ -0.43
UBA1-209ENST00000490869 ENPP3O14638 875 aa12.37□□□□□ -0.43
UBA1-209ENST00000490869 CD52P31358 61 aa12.37□□□□□ -0.43
UBA1-209ENST00000490869 CIITAP33076 1130 aa12.37□□□□□ -0.43
UBA1-209ENST00000490869 NLRP5P59047 1200 aa12.37□□□□□ -0.43
UBA1-209ENST00000490869 SSRP1Q08945 709 aaKnown RBP12.37□□□□□ -0.43
UBA1-209ENST00000490869 EPC2Q52LR7 807 aa12.37□□□□□ -0.43
UBA1-209ENST00000490869 ZNF746Q6NUN9 644 aaPredicted RBP12.37□□□□□ -0.43
UBA1-209ENST00000490869 SWSAP1Q6NVH7 229 aa12.37□□□□□ -0.43
UBA1-209ENST00000490869 HLA-CQ95604 372 aa12.37□□□□□ -0.43
UBA1-209ENST00000490869 IL17RAQ96F46 866 aa12.37□□□□□ -0.43
UBA1-209ENST00000490869 ZNF274Q96GC6 653 aaPredicted RBP12.37□□□□□ -0.43
UBA1-209ENST00000490869 UHRF1Q96T88 793 aaPredicted RBP12.37□□□□□ -0.43
UBA1-209ENST00000490869 LARP6Q9BRS8 491 aaKnown RBP12.37□□□□□ -0.43
UBA1-209ENST00000490869 TM6SF1Q9BZW5 370 aa12.37□□□□□ -0.43
UBA1-209ENST00000490869 AGO3Q9H9G7 860 aaKnown RBP12.37□□□□□ -0.43
UBA1-209ENST00000490869 SH3GLB2Q9NR46 395 aa12.37□□□□□ -0.43
UBA1-209ENST00000490869 TCEAL9Q9UHQ7 104 aa12.37□□□□□ -0.43
UBA1-209ENST00000490869 SQORQ9Y6N5 450 aa12.37□□□□□ -0.43
UBA1-209ENST00000490869 COL1A2P08123 1366 aa12.37□□□□□ -0.43
UBA1-209ENST00000490869 CPLX1O14810 134 aa12.36□□□□□ -0.43
UBA1-209ENST00000490869 BMP1P13497 986 aa12.36□□□□□ -0.43
UBA1-209ENST00000490869 ATP4AP20648 1035 aa12.36□□□□□ -0.43
UBA1-209ENST00000490869 KLRC1P26715 233 aa12.36□□□□□ -0.43
UBA1-209ENST00000490869 KCNQ1P51787 676 aa12.36□□□□□ -0.43
UBA1-209ENST00000490869 KRT76Q01546 638 aa12.36□□□□□ -0.43
UBA1-209ENST00000490869 STK3Q13188 491 aa12.36□□□□□ -0.43
UBA1-209ENST00000490869 ZNF484Q5JVG2 852 aa12.36□□□□□ -0.43
UBA1-209ENST00000490869 TMEM192Q8IY95 271 aa12.36□□□□□ -0.43
UBA1-209ENST00000490869 CKAP2LQ8IYA6 745 aa12.36□□□□□ -0.43
UBA1-209ENST00000490869 SMAP1Q8IYB5 467 aaPredicted RBP12.36□□□□□ -0.43
UBA1-209ENST00000490869 NME8Q8N427 588 aa12.36□□□□□ -0.43
UBA1-209ENST00000490869 FIBCD1Q8N539 461 aa12.36□□□□□ -0.43
UBA1-209ENST00000490869 LENG9Q96B70 501 aa12.36□□□□□ -0.43
UBA1-209ENST00000490869 CELF4Q9BZC1 486 aaKnown RBP12.36□□□□□ -0.43
UBA1-209ENST00000490869 PDRG1Q9NUG6 133 aa12.36□□□□□ -0.43
UBA1-209ENST00000490869 ADGRA3Q8IWK6 1321 aa12.36□□□□□ -0.43
UBA1-209ENST00000490869 IGSF9BQ9UPX0 1349 aa12.36□□□□□ -0.43
UBA1-209ENST00000490869 CHD7Q9P2D1 2997 aa12.35□□□□□ -0.43
UBA1-209ENST00000490869 H3BNC9 293 aa12.35□□□□□ -0.43
UBA1-209ENST00000490869 DEXIO95424 95 aa12.35□□□□□ -0.43
UBA1-209ENST00000490869 PSAPP07602 524 aa12.35□□□□□ -0.43
UBA1-209ENST00000490869 PAK2Q13177 524 aa12.35□□□□□ -0.43
UBA1-209ENST00000490869 GPM6BQ13491 265 aa12.35□□□□□ -0.43
UBA1-209ENST00000490869 PTPROQ16827 1216 aa12.35□□□□□ -0.43
UBA1-209ENST00000490869 CPLX2Q6PUV4 134 aaKnown RBP12.35□□□□□ -0.43
UBA1-209ENST00000490869 LINC01599Q8WXQ3 324 aa12.35□□□□□ -0.43
UBA1-209ENST00000490869 BBXQ8WY36 941 aaPredicted RBP12.35□□□□□ -0.43
UBA1-209ENST00000490869 FTHL17Q9BXU8 183 aa12.35□□□□□ -0.43
UBA1-209ENST00000490869 RC3H2Q9HBD1 1191 aaKnown RBP12.35□□□□□ -0.43
UBA1-209ENST00000490869 PPP4R2Q9NY27 417 aa12.35□□□□□ -0.43
UBA1-209ENST00000490869 GABBR1Q9UBS5 961 aa12.35□□□□□ -0.43
UBA1-209ENST00000490869 PADI3Q9ULW8 664 aa12.35□□□□□ -0.43
UBA1-209ENST00000490869 PCDHA4Q9UN74 947 aa12.35□□□□□ -0.43
UBA1-209ENST00000490869 GINS2Q9Y248 185 aa12.35□□□□□ -0.43
UBA1-209ENST00000490869 SAMM50Q9Y512 469 aa12.35□□□□□ -0.43
UBA1-209ENST00000490869 PCDHA10Q9Y5I2 948 aa12.35□□□□□ -0.43
UBA1-209ENST00000490869 MAFBQ9Y5Q3 323 aaPredicted RBP12.35□□□□□ -0.43
UBA1-209ENST00000490869 KDM3AQ9Y4C1 1321 aa12.35□□□□□ -0.43
UBA1-209ENST00000490869 ZBTB42B2RXF5 422 aa12.34□□□□□ -0.43
UBA1-209ENST00000490869 MSH4O15457 936 aa12.34□□□□□ -0.43
UBA1-209ENST00000490869 EDIL3O43854 480 aa12.34□□□□□ -0.43
UBA1-209ENST00000490869 CTNNB1P35222 781 aa12.34□□□□□ -0.43
UBA1-209ENST00000490869 USP11P51784 963 aa12.34□□□□□ -0.43
UBA1-209ENST00000490869 TRMT1LQ7Z2T5 733 aaKnown RBP12.34□□□□□ -0.43
UBA1-209ENST00000490869 KIAA0319LQ8IZA0 1049 aa12.34□□□□□ -0.43
UBA1-209ENST00000490869 TBCKQ8TEA7 893 aa12.34□□□□□ -0.43
UBA1-209ENST00000490869 ZNF689Q96CS4 500 aaPredicted RBP12.34□□□□□ -0.43
UBA1-209ENST00000490869 MRPL38Q96DV4 380 aaKnown RBP12.34□□□□□ -0.43
UBA1-209ENST00000490869 NECAB3Q96P71 396 aaPredicted RBP12.34□□□□□ -0.43
UBA1-209ENST00000490869 C22orf23Q9BZE7 217 aa12.34□□□□□ -0.43
UBA1-209ENST00000490869 MYO9BQ13459 2157 aa12.34□□□□□ -0.43
UBA1-209ENST00000490869 PRUNE2Q8WUY3 3088 aa12.34□□□□□ -0.43
UBA1-209ENST00000490869 RALGAPA2Q2PPJ7 1873 aa12.34□□□□□ -0.43
UBA1-209ENST00000490869 NLRC5Q86WI3 1866 aa12.34□□□□□ -0.43
UBA1-209ENST00000490869 WDR64B1ANS9 1081 aa12.33□□□□□ -0.44
UBA1-209ENST00000490869 DGKIO75912 1065 aa12.33□□□□□ -0.44
UBA1-209ENST00000490869 C22orf31O95567 290 aa12.33□□□□□ -0.44
UBA1-209ENST00000490869 NFX1Q12986 1120 aaKnown RBP12.33□□□□□ -0.44
UBA1-209ENST00000490869 BTG3Q14201 252 aaPredicted RBP12.33□□□□□ -0.44
UBA1-209ENST00000490869 TMEM266Q2M3C6 531 aa12.33□□□□□ -0.44
UBA1-209ENST00000490869 RTN4RL1Q86UN2 441 aaPredicted RBP12.33□□□□□ -0.44
UBA1-209ENST00000490869 NPAS4Q8IUM7 802 aa12.33□□□□□ -0.44
UBA1-209ENST00000490869 BLIDQ8IZY5 108 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms