RNA–Protein interactions for RNA: ENST00000490730.1

SYNE4-205, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 1,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-205ENST00000490730 AGO3Q9H9G7 860 aaKnown RBP23.85■■□□□ 1.41
SYNE4-205ENST00000490730 PCDHA2Q9Y5H9 948 aa23.85■■□□□ 1.41
SYNE4-205ENST00000490730 BRWD1Q9NSI6 2320 aa23.85■■□□□ 1.41
SYNE4-205ENST00000490730 NID2Q14112 1375 aa23.84■■□□□ 1.41
SYNE4-205ENST00000490730 ESYT2A0FGR8 921 aa23.84■■□□□ 1.41
SYNE4-205ENST00000490730 IPO5O00410 1097 aaKnown RBP23.84■■□□□ 1.41
SYNE4-205ENST00000490730 ADAMTS3O15072 1205 aa23.84■■□□□ 1.41
SYNE4-205ENST00000490730 PRPF3O43395 683 aaKnown RBP23.84■■□□□ 1.41
SYNE4-205ENST00000490730 ZNF577Q9BSK1 485 aa23.84■■□□□ 1.41
SYNE4-205ENST00000490730 SLC26A6Q9BXS9 759 aa23.84■■□□□ 1.41
SYNE4-205ENST00000490730 UBE2ZQ9H832 354 aaPredicted RBP23.84■■□□□ 1.41
SYNE4-205ENST00000490730 TCEAL9Q9UHQ7 104 aa23.84■■□□□ 1.41
SYNE4-205ENST00000490730 ADGRA3Q8IWK6 1321 aa23.84■■□□□ 1.41
SYNE4-205ENST00000490730 H3BNC9 293 aa23.83■■□□□ 1.41
SYNE4-205ENST00000490730 ATG7O95352 703 aa23.83■■□□□ 1.41
SYNE4-205ENST00000490730 GNA11P29992 359 aa23.83■■□□□ 1.41
SYNE4-205ENST00000490730 SLC26A2P50443 739 aa23.83■■□□□ 1.41
SYNE4-205ENST00000490730 PKN1Q16512 942 aa23.83■■□□□ 1.41
SYNE4-205ENST00000490730 MIS18BP1Q6P0N0 1132 aa23.83■■□□□ 1.41
SYNE4-205ENST00000490730 PDXDC2PQ6P474 469 aa23.83■■□□□ 1.41
SYNE4-205ENST00000490730 MTHFD1LQ6UB35 978 aa23.83■■□□□ 1.41
SYNE4-205ENST00000490730 ABHD15Q6UXT9 468 aa23.83■■□□□ 1.41
SYNE4-205ENST00000490730 CCDC60Q8IWA6 550 aaPredicted RBP23.83■■□□□ 1.41
SYNE4-205ENST00000490730 RASGRP4Q8TDF6 673 aa23.83■■□□□ 1.41
SYNE4-205ENST00000490730 ZNF302Q9NR11 478 aa23.83■■□□□ 1.41
SYNE4-205ENST00000490730 GINS2Q9Y248 185 aa23.83■■□□□ 1.41
SYNE4-205ENST00000490730 IGLV3-22A0A075B6J6 115 aa23.82■■□□□ 1.4
SYNE4-205ENST00000490730 CYP3A4P08684 503 aa23.82■■□□□ 1.4
SYNE4-205ENST00000490730 IBSPP21815 317 aaPredicted RBP23.82■■□□□ 1.4
SYNE4-205ENST00000490730 KCNA5P22460 613 aa23.82■■□□□ 1.4
SYNE4-205ENST00000490730 CCT2P78371 535 aaKnown RBP23.82■■□□□ 1.4
SYNE4-205ENST00000490730 PAK2Q13177 524 aa23.82■■□□□ 1.4
SYNE4-205ENST00000490730 TIGD5Q53EQ6 642 aa23.82■■□□□ 1.4
SYNE4-205ENST00000490730 MCTP2Q6DN12 878 aa23.82■■□□□ 1.4
SYNE4-205ENST00000490730 SWSAP1Q6NVH7 229 aa23.82■■□□□ 1.4
SYNE4-205ENST00000490730 CKAP2LQ8IYA6 745 aa23.82■■□□□ 1.4
SYNE4-205ENST00000490730 ATP8B4Q8TF62 1192 aa23.82■■□□□ 1.4
SYNE4-205ENST00000490730 CELF4Q9BZC1 486 aaKnown RBP23.82■■□□□ 1.4
SYNE4-205ENST00000490730 NCOA5Q9HCD5 579 aaKnown RBP23.82■■□□□ 1.4
SYNE4-205ENST00000490730 IGKV6D-21A0A0A0MT36 114 aa23.81■■□□□ 1.4
SYNE4-205ENST00000490730 SMIM35A0A1B0GVV1 85 aa23.81■■□□□ 1.4
SYNE4-205ENST00000490730 HBP1O60381 514 aa23.81■■□□□ 1.4
SYNE4-205ENST00000490730 KLRC1P26715 233 aa23.81■■□□□ 1.4
SYNE4-205ENST00000490730 SETQ01105 290 aaPredicted RBP23.81■■□□□ 1.4
SYNE4-205ENST00000490730 KRT76Q01546 638 aa23.81■■□□□ 1.4
SYNE4-205ENST00000490730 BTG3Q14201 252 aaPredicted RBP23.81■■□□□ 1.4
SYNE4-205ENST00000490730 PRR16Q569H4 304 aa23.81■■□□□ 1.4
SYNE4-205ENST00000490730 TRMT1LQ7Z2T5 733 aaKnown RBP23.81■■□□□ 1.4
SYNE4-205ENST00000490730 BANK1Q8NDB2 785 aa23.81■■□□□ 1.4
SYNE4-205ENST00000490730 CCDC148Q8NFR7 591 aa23.81■■□□□ 1.4
SYNE4-205ENST00000490730 BICD2Q8TD16 824 aa23.81■■□□□ 1.4
SYNE4-205ENST00000490730 CRYGNQ8WXF5 182 aa23.81■■□□□ 1.4
SYNE4-205ENST00000490730 LINC01599Q8WXQ3 324 aa23.81■■□□□ 1.4
SYNE4-205ENST00000490730 PADI3Q9ULW8 664 aa23.81■■□□□ 1.4
SYNE4-205ENST00000490730 DHX15O43143 795 aaKnown RBP23.8■■□□□ 1.4
SYNE4-205ENST00000490730 TTC3P53804 2025 aa23.8■■□□□ 1.4
SYNE4-205ENST00000490730 EP400NLQ6ZTU2 488 aa23.8■■□□□ 1.4
SYNE4-205ENST00000490730 FBXL16Q8N461 479 aa23.8■■□□□ 1.4
SYNE4-205ENST00000490730 FTHL17Q9BXU8 183 aa23.8■■□□□ 1.4
SYNE4-205ENST00000490730 RNF26Q9BY78 433 aaPredicted RBP23.8■■□□□ 1.4
SYNE4-205ENST00000490730 AGXT2Q9BYV1 514 aa23.8■■□□□ 1.4
SYNE4-205ENST00000490730 TBC1D22BQ9NU19 505 aa23.8■■□□□ 1.4
SYNE4-205ENST00000490730 VPS54Q9P1Q0 977 aa23.8■■□□□ 1.4
SYNE4-205ENST00000490730 SQORQ9Y6N5 450 aa23.8■■□□□ 1.4
SYNE4-205ENST00000490730 IGSF9BQ9UPX0 1349 aa23.8■■□□□ 1.4
SYNE4-205ENST00000490730 MYH9P35579 1960 aaKnown RBP23.8■■□□□ 1.4
SYNE4-205ENST00000490730 CSPG5O95196 566 aa23.79■■□□□ 1.4
SYNE4-205ENST00000490730 PDIA3P30101 505 aaKnown RBP23.79■■□□□ 1.4
SYNE4-205ENST00000490730 NTRK3Q16288 839 aa23.79■■□□□ 1.4
SYNE4-205ENST00000490730 TMEM266Q2M3C6 531 aa23.79■■□□□ 1.4
SYNE4-205ENST00000490730 NME8Q8N427 588 aa23.79■■□□□ 1.4
SYNE4-205ENST00000490730 RC3H2Q9HBD1 1191 aaKnown RBP23.79■■□□□ 1.4
SYNE4-205ENST00000490730 RWDD3Q9Y3V2 267 aa23.79■■□□□ 1.4
SYNE4-205ENST00000490730 SAMM50Q9Y512 469 aa23.79■■□□□ 1.4
SYNE4-205ENST00000490730 COL1A2P08123 1366 aa23.78■■□□□ 1.4
SYNE4-205ENST00000490730 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.78■■□□□ 1.4
SYNE4-205ENST00000490730 IFNAR1P17181 557 aa23.78■■□□□ 1.4
SYNE4-205ENST00000490730 BMPR1AP36894 532 aa23.78■■□□□ 1.4
SYNE4-205ENST00000490730 NFX1Q12986 1120 aaKnown RBP23.78■■□□□ 1.4
SYNE4-205ENST00000490730 TCEAL5Q5H9L2 206 aa23.78■■□□□ 1.4
SYNE4-205ENST00000490730 ZNF484Q5JVG2 852 aa23.78■■□□□ 1.4
SYNE4-205ENST00000490730 ZNF746Q6NUN9 644 aaPredicted RBP23.78■■□□□ 1.4
SYNE4-205ENST00000490730 PPP1R16BQ96T49 567 aa23.78■■□□□ 1.4
SYNE4-205ENST00000490730 C11orf84Q9BUA3 381 aaPredicted RBP23.78■■□□□ 1.4
SYNE4-205ENST00000490730 NSUN3Q9H649 340 aaKnown RBP23.78■■□□□ 1.4
SYNE4-205ENST00000490730 EVPLQ92817 2033 aa23.77■■□□□ 1.4
SYNE4-205ENST00000490730 DGKIO75912 1065 aa23.77■■□□□ 1.4
SYNE4-205ENST00000490730 PSAPP07602 524 aa23.77■■□□□ 1.4
SYNE4-205ENST00000490730 PAN2Q504Q3 1202 aaKnown RBP23.77■■□□□ 1.4
SYNE4-205ENST00000490730 RUFY3Q7L099 469 aa23.77■■□□□ 1.4
SYNE4-205ENST00000490730 RTN4RL1Q86UN2 441 aaPredicted RBP23.77■■□□□ 1.4
SYNE4-205ENST00000490730 NPAS4Q8IUM7 802 aa23.77■■□□□ 1.4
SYNE4-205ENST00000490730 ZNF689Q96CS4 500 aaPredicted RBP23.77■■□□□ 1.4
SYNE4-205ENST00000490730 LRFN2Q9ULH4 789 aa23.77■■□□□ 1.4
SYNE4-205ENST00000490730 RB1P06400 928 aa23.76■■□□□ 1.39
SYNE4-205ENST00000490730 ATP4AP20648 1035 aa23.76■■□□□ 1.39
SYNE4-205ENST00000490730 COL9A1P20849 921 aa23.76■■□□□ 1.39
SYNE4-205ENST00000490730 NLRP5P59047 1200 aa23.76■■□□□ 1.39
SYNE4-205ENST00000490730 LEXMQ3ZCV2 418 aa23.76■■□□□ 1.39
SYNE4-205ENST00000490730 SMAP1Q8IYB5 467 aaPredicted RBP23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms