RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 ARHGEF35A5YM69 484 aa12.23□□□□□ -0.45
VARS2-210ENST00000490699 POLR2DO15514 142 aaKnown RBP12.23□□□□□ -0.45
VARS2-210ENST00000490699 CABYRO75952 493 aa12.23□□□□□ -0.45
VARS2-210ENST00000490699 PGK1P00558 417 aa12.23□□□□□ -0.45
VARS2-210ENST00000490699 LGALS2P05162 132 aa12.23□□□□□ -0.45
VARS2-210ENST00000490699 SSBP05455 408 aaKnown RBP eCLIP12.23□□□□□ -0.45
VARS2-210ENST00000490699 CDC25AP30304 524 aa12.23□□□□□ -0.45
VARS2-210ENST00000490699 PRKCEQ02156 737 aa12.23□□□□□ -0.45
VARS2-210ENST00000490699 CTTNQ14247 550 aaKnown RBP12.23□□□□□ -0.45
VARS2-210ENST00000490699 KARSQ15046 597 aaKnown RBP12.23□□□□□ -0.45
VARS2-210ENST00000490699 XKR3Q5GH77 459 aa12.23□□□□□ -0.45
VARS2-210ENST00000490699 POTEBQ6S5H4 581 aa12.23□□□□□ -0.45
VARS2-210ENST00000490699 CATSPER3Q86XQ3 398 aa12.23□□□□□ -0.45
VARS2-210ENST00000490699 C4orf19Q8IY42 314 aa12.23□□□□□ -0.45
VARS2-210ENST00000490699 CNNM3Q8NE01 707 aa12.23□□□□□ -0.45
VARS2-210ENST00000490699 AFAP1L1Q8TED9 768 aa12.23□□□□□ -0.45
VARS2-210ENST00000490699 VTI1AQ96AJ9 217 aa12.23□□□□□ -0.45
VARS2-210ENST00000490699 LENG1Q96BZ8 264 aaPredicted RBP12.23□□□□□ -0.45
VARS2-210ENST00000490699 DHX58Q96C10 678 aa12.23□□□□□ -0.45
VARS2-210ENST00000490699 ARMC5Q96C12 935 aa12.23□□□□□ -0.45
VARS2-210ENST00000490699 ZNF333Q96JL9 665 aa12.23□□□□□ -0.45
VARS2-210ENST00000490699 DEFB118Q96PH6 123 aa12.23□□□□□ -0.45
VARS2-210ENST00000490699 HSD17B14Q9BPX1 270 aa12.23□□□□□ -0.45
VARS2-210ENST00000490699 MTG1Q9BT17 334 aaPredicted RBP12.23□□□□□ -0.45
VARS2-210ENST00000490699 UNC93B1Q9H1C4 597 aa12.23□□□□□ -0.45
VARS2-210ENST00000490699 LMBRD1Q9NUN5 540 aa12.23□□□□□ -0.45
VARS2-210ENST00000490699 RGL1Q9NZL6 768 aa12.23□□□□□ -0.45
VARS2-210ENST00000490699 SEPT9Q9UHD8 586 aaPredicted RBP12.23□□□□□ -0.45
VARS2-210ENST00000490699 PPME1Q9Y570 386 aa12.23□□□□□ -0.45
VARS2-210ENST00000490699 MYH9P35579 1960 aaKnown RBP12.23□□□□□ -0.45
VARS2-210ENST00000490699 IGSF9BQ9UPX0 1349 aa12.22□□□□□ -0.45
VARS2-210ENST00000490699 POTEFA5A3E0 1075 aa12.22□□□□□ -0.45
VARS2-210ENST00000490699 MOXD2PA6NHM9 499 aa12.22□□□□□ -0.45
VARS2-210ENST00000490699 H3BRB1 525 aa12.22□□□□□ -0.45
VARS2-210ENST00000490699 MED24O75448 989 aa12.22□□□□□ -0.45
VARS2-210ENST00000490699 LGR5O75473 907 aa12.22□□□□□ -0.45
VARS2-210ENST00000490699 SLITRK3O94933 977 aa12.22□□□□□ -0.45
VARS2-210ENST00000490699 LYPLA2O95372 231 aa12.22□□□□□ -0.45
VARS2-210ENST00000490699 OATP04181 439 aa12.22□□□□□ -0.45
VARS2-210ENST00000490699 KRT18P05783 430 aaKnown RBP12.22□□□□□ -0.45
VARS2-210ENST00000490699 XRCC6P12956 609 aaKnown RBP eCLIP12.22□□□□□ -0.45
VARS2-210ENST00000490699 PLCG1P19174 1290 aa12.22□□□□□ -0.45
VARS2-210ENST00000490699 CST5P28325 142 aaPredicted RBP12.22□□□□□ -0.45
VARS2-210ENST00000490699 YWHABP31946 246 aaKnown RBP12.22□□□□□ -0.45
VARS2-210ENST00000490699 NDUFA8P51970 172 aa12.22□□□□□ -0.45
VARS2-210ENST00000490699 CHMP4BP1P59074 171 aa12.22□□□□□ -0.45
VARS2-210ENST00000490699 HYIQ5T013 277 aa12.22□□□□□ -0.45
VARS2-210ENST00000490699 SV2BQ7L1I2 683 aa12.22□□□□□ -0.45
VARS2-210ENST00000490699 CCDC60Q8IWA6 550 aaPredicted RBP12.22□□□□□ -0.45
VARS2-210ENST00000490699 BBXQ8WY36 941 aaPredicted RBP12.22□□□□□ -0.45
VARS2-210ENST00000490699 LARP4BQ92615 738 aaKnown RBP12.22□□□□□ -0.45
VARS2-210ENST00000490699 CCDC47Q96A33 483 aaKnown RBP12.22□□□□□ -0.45
VARS2-210ENST00000490699 MS4A3Q96HJ5 214 aa12.22□□□□□ -0.45
VARS2-210ENST00000490699 GLT1D1Q96MS3 346 aa12.22□□□□□ -0.45
VARS2-210ENST00000490699 JPH2Q9BR39 696 aaPredicted RBP12.22□□□□□ -0.45
VARS2-210ENST00000490699 TSEN34Q9BSV6 310 aaKnown RBP12.22□□□□□ -0.45
VARS2-210ENST00000490699 PANK2Q9BZ23 570 aa12.22□□□□□ -0.45
VARS2-210ENST00000490699 TUT1Q9H6E5 874 aaKnown RBP12.22□□□□□ -0.45
VARS2-210ENST00000490699 PAK6Q9NQU5 681 aaPredicted RBP12.22□□□□□ -0.45
VARS2-210ENST00000490699 ANKEF1Q9NU02 776 aa12.22□□□□□ -0.45
VARS2-210ENST00000490699 MAFBQ9Y5Q3 323 aaPredicted RBP12.22□□□□□ -0.45
VARS2-210ENST00000490699 IGKV6D-21A0A0A0MT36 114 aa12.21□□□□□ -0.45
VARS2-210ENST00000490699 ADCY6O43306 1168 aa12.21□□□□□ -0.45
VARS2-210ENST00000490699 HBP1O60381 514 aa12.21□□□□□ -0.45
VARS2-210ENST00000490699 GADD45BO75293 160 aaPredicted RBP12.21□□□□□ -0.45
VARS2-210ENST00000490699 ZNF202O95125 648 aa12.21□□□□□ -0.45
VARS2-210ENST00000490699 TFRCP02786 760 aaKnown RBP12.21□□□□□ -0.45
VARS2-210ENST00000490699 ZNF286BP0CG31 522 aa12.21□□□□□ -0.45
VARS2-210ENST00000490699 GNAT1P11488 350 aa12.21□□□□□ -0.45
VARS2-210ENST00000490699 HOXD8P13378 290 aaPredicted RBP12.21□□□□□ -0.45
VARS2-210ENST00000490699 MARK3P27448 753 aa12.21□□□□□ -0.45
VARS2-210ENST00000490699 NKX3-2P78367 333 aa12.21□□□□□ -0.45
VARS2-210ENST00000490699 BEX3Q00994 111 aa12.21□□□□□ -0.45
VARS2-210ENST00000490699 TMEM119Q4V9L6 283 aa12.21□□□□□ -0.45
VARS2-210ENST00000490699 XKR9Q5GH70 373 aa12.21□□□□□ -0.45
VARS2-210ENST00000490699 TMEM63BQ5T3F8 832 aa12.21□□□□□ -0.45
VARS2-210ENST00000490699 TRMT1LQ7Z2T5 733 aaKnown RBP12.21□□□□□ -0.45
VARS2-210ENST00000490699 ATP8B4Q8TF62 1192 aa12.21□□□□□ -0.45
VARS2-210ENST00000490699 TIGD1Q96MW7 591 aa12.21□□□□□ -0.45
VARS2-210ENST00000490699 PLIN2Q99541 437 aa12.21□□□□□ -0.45
VARS2-210ENST00000490699 MCOLN1Q9GZU1 580 aa12.21□□□□□ -0.45
VARS2-210ENST00000490699 BCAS3Q9H6U6 928 aa12.21□□□□□ -0.45
VARS2-210ENST00000490699 DBR1Q9UK59 544 aaKnown RBP12.21□□□□□ -0.45
VARS2-210ENST00000490699 FAM237AA0A1B0GTK4 181 aa12.2□□□□□ -0.46
VARS2-210ENST00000490699 DNM1LO00429 736 aa12.2□□□□□ -0.46
VARS2-210ENST00000490699 CTAGE5O15320 804 aa12.2□□□□□ -0.46
VARS2-210ENST00000490699 ADAMTS4O75173 837 aa12.2□□□□□ -0.46
VARS2-210ENST00000490699 EYA4O95677 639 aa12.2□□□□□ -0.46
VARS2-210ENST00000490699 F2P00734 622 aa12.2□□□□□ -0.46
VARS2-210ENST00000490699 MYL1P05976 194 aa12.2□□□□□ -0.46
VARS2-210ENST00000490699 GJB1P08034 283 aa12.2□□□□□ -0.46
VARS2-210ENST00000490699 SLFN14P0C7P3 912 aa12.2□□□□□ -0.46
VARS2-210ENST00000490699 SPATA31C1P0DKV0 1188 aa12.2□□□□□ -0.46
VARS2-210ENST00000490699 GRB10Q13322 594 aa12.2□□□□□ -0.46
VARS2-210ENST00000490699 MFSD10Q14728 455 aa12.2□□□□□ -0.46
VARS2-210ENST00000490699 LRRC41Q15345 812 aa12.2□□□□□ -0.46
VARS2-210ENST00000490699 MTFR1Q15390 333 aa12.2□□□□□ -0.46
VARS2-210ENST00000490699 NFKBIBQ15653 356 aa12.2□□□□□ -0.46
VARS2-210ENST00000490699 KCNA10Q16322 511 aa12.2□□□□□ -0.46
VARS2-210ENST00000490699 USP49Q70CQ1 688 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms