RNA–Protein interactions for RNA: ENST00000490332.2

PTPRK-213, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 612 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-213ENST00000490332 A0A0G2JMZ2 1700 aa5.7□□□□□ -1.5
PTPRK-213ENST00000490332 FRMPD3Q5JV73 1810 aa5.69□□□□□ -1.5
PTPRK-213ENST00000490332 USP24Q9UPU5 2620 aa5.69□□□□□ -1.5
PTPRK-213ENST00000490332 BIN1O00499 593 aa5.69□□□□□ -1.5
PTPRK-213ENST00000490332 LAD1O00515 517 aa5.69□□□□□ -1.5
PTPRK-213ENST00000490332 POLR2DO15514 142 aaKnown RBP5.69□□□□□ -1.5
PTPRK-213ENST00000490332 STX10O60499 249 aa5.69□□□□□ -1.5
PTPRK-213ENST00000490332 LDHBP07195 334 aaKnown RBP5.69□□□□□ -1.5
PTPRK-213ENST00000490332 SCG2P13521 617 aa5.69□□□□□ -1.5
PTPRK-213ENST00000490332 HOXB4P17483 251 aaPredicted RBP5.69□□□□□ -1.5
PTPRK-213ENST00000490332 POU3F3P20264 500 aaPredicted RBP5.69□□□□□ -1.5
PTPRK-213ENST00000490332 MX2P20592 715 aa5.69□□□□□ -1.5
PTPRK-213ENST00000490332 ATP2B4P23634 1241 aa5.69□□□□□ -1.5
PTPRK-213ENST00000490332 GUCY1A2P33402 732 aa5.69□□□□□ -1.5
PTPRK-213ENST00000490332 LONP1P36776 959 aaKnown RBP5.69□□□□□ -1.5
PTPRK-213ENST00000490332 TXLNAP40222 546 aa5.69□□□□□ -1.5
PTPRK-213ENST00000490332 NLRP5P59047 1200 aa5.69□□□□□ -1.5
PTPRK-213ENST00000490332 CCZ1BP86790 482 aa5.69□□□□□ -1.5
PTPRK-213ENST00000490332 CCZ1P86791 482 aaPredicted RBP5.69□□□□□ -1.5
PTPRK-213ENST00000490332 RBM10P98175 930 aaKnown RBP5.69□□□□□ -1.5
PTPRK-213ENST00000490332 MECOMQ03112 1051 aa5.69□□□□□ -1.5
PTPRK-213ENST00000490332 SPAG1Q07617 926 aa5.69□□□□□ -1.5
PTPRK-213ENST00000490332 ORC2Q13416 577 aaPredicted RBP5.69□□□□□ -1.5
PTPRK-213ENST00000490332 PNOCQ13519 176 aa5.69□□□□□ -1.5
PTPRK-213ENST00000490332 PFKFB3Q16875 520 aaPredicted RBP5.69□□□□□ -1.5
PTPRK-213ENST00000490332 CFAP100Q494V2 611 aa5.69□□□□□ -1.5
PTPRK-213ENST00000490332 FOXR1Q6PIV2 292 aa5.69□□□□□ -1.5
PTPRK-213ENST00000490332 METTL16Q86W50 562 aaKnown RBP5.69□□□□□ -1.5
PTPRK-213ENST00000490332 DZIP1Q86YF9 867 aaKnown RBP5.69□□□□□ -1.5
PTPRK-213ENST00000490332 KIAA0825Q8IV33 1275 aa5.69□□□□□ -1.5
PTPRK-213ENST00000490332 VSTM4Q8IW00 320 aa5.69□□□□□ -1.5
PTPRK-213ENST00000490332 FAM178BQ8IXR5 827 aa5.69□□□□□ -1.5
PTPRK-213ENST00000490332 ZNF444Q8N0Y2 327 aaPredicted RBP5.69□□□□□ -1.5
PTPRK-213ENST00000490332 C17orf53Q8N3J3 647 aaPredicted RBP5.69□□□□□ -1.5
PTPRK-213ENST00000490332 CCDC148Q8NFR7 591 aa5.69□□□□□ -1.5
PTPRK-213ENST00000490332 SPATA20Q8TB22 786 aa5.69□□□□□ -1.5
PTPRK-213ENST00000490332 CCDC12Q8WUD4 166 aaPredicted RBP5.69□□□□□ -1.5
PTPRK-213ENST00000490332 SDR42E1Q8WUS8 393 aa5.69□□□□□ -1.5
PTPRK-213ENST00000490332 HOOK2Q96ED9 719 aa5.69□□□□□ -1.5
PTPRK-213ENST00000490332 CLIC6Q96NY7 704 aa5.69□□□□□ -1.5
PTPRK-213ENST00000490332 ZKSCAN3Q9BRR0 538 aa5.69□□□□□ -1.5
PTPRK-213ENST00000490332 MYL10Q9BUA6 226 aa5.69□□□□□ -1.5
PTPRK-213ENST00000490332 CCDC94Q9BW85 323 aaPredicted RBP5.69□□□□□ -1.5
PTPRK-213ENST00000490332 NAA15Q9BXJ9 866 aaKnown RBP5.69□□□□□ -1.5
PTPRK-213ENST00000490332 KAT14Q9H8E8 782 aa5.69□□□□□ -1.5
PTPRK-213ENST00000490332 CD320Q9NPF0 282 aa5.69□□□□□ -1.5
PTPRK-213ENST00000490332 DCP1AQ9NPI6 582 aaPredicted RBP5.69□□□□□ -1.5
PTPRK-213ENST00000490332 SERTAD1Q9UHV2 236 aa5.69□□□□□ -1.5
PTPRK-213ENST00000490332 ATP11BQ9Y2G3 1177 aa5.69□□□□□ -1.5
PTPRK-213ENST00000490332 TACC3Q9Y6A5 838 aa5.69□□□□□ -1.5
PTPRK-213ENST00000490332 SNCAIPQ9Y6H5 919 aa5.69□□□□□ -1.5
PTPRK-213ENST00000490332 RLFQ13129 1914 aa5.69□□□□□ -1.5
PTPRK-213ENST00000490332 XDHP47989 1333 aa5.69□□□□□ -1.5
PTPRK-213ENST00000490332 MYH6P13533 1939 aa5.68□□□□□ -1.5
PTPRK-213ENST00000490332 TSPY2A6NKD2 308 aa5.68□□□□□ -1.5
PTPRK-213ENST00000490332 SNAP23O00161 211 aa5.68□□□□□ -1.5
PTPRK-213ENST00000490332 ARHGAP6O43182 974 aa5.68□□□□□ -1.5
PTPRK-213ENST00000490332 SLU7O95391 586 aaKnown RBP5.68□□□□□ -1.5
PTPRK-213ENST00000490332 PPP1R2P41236 205 aa5.68□□□□□ -1.5
PTPRK-213ENST00000490332 USP5P45974 858 aa5.68□□□□□ -1.5
PTPRK-213ENST00000490332 PLCD1P51178 756 aa5.68□□□□□ -1.5
PTPRK-213ENST00000490332 DYNLL1P63167 89 aaKnown RBP5.68□□□□□ -1.5
PTPRK-213ENST00000490332 ATP2C1P98194 919 aaPredicted RBP5.68□□□□□ -1.5
PTPRK-213ENST00000490332 FPGSQ05932 587 aa5.68□□□□□ -1.5
PTPRK-213ENST00000490332 TCF15Q12870 199 aa5.68□□□□□ -1.5
PTPRK-213ENST00000490332 TUBB2AQ13885 445 aa5.68□□□□□ -1.5
PTPRK-213ENST00000490332 TTC38Q5R3I4 469 aa5.68□□□□□ -1.5
PTPRK-213ENST00000490332 C12orf60Q5U649 245 aa5.68□□□□□ -1.5
PTPRK-213ENST00000490332 SPATA1Q5VX52 437 aa5.68□□□□□ -1.5
PTPRK-213ENST00000490332 RIPOR1Q6ZS17 1223 aa5.68□□□□□ -1.5
PTPRK-213ENST00000490332 ADGRA1Q86SQ6 560 aa5.68□□□□□ -1.5
PTPRK-213ENST00000490332 ZBTB33Q86T24 672 aa5.68□□□□□ -1.5
PTPRK-213ENST00000490332 FOXP4Q8IVH2 680 aaPredicted RBP5.68□□□□□ -1.5
PTPRK-213ENST00000490332 TBC1D22AQ8WUA7 517 aa5.68□□□□□ -1.5
PTPRK-213ENST00000490332 UBE2Q2Q8WVN8 375 aa5.68□□□□□ -1.5
PTPRK-213ENST00000490332 ANKRD7Q92527 254 aa5.68□□□□□ -1.5
PTPRK-213ENST00000490332 CCDC47Q96A33 483 aaKnown RBP5.68□□□□□ -1.5
PTPRK-213ENST00000490332 CCDC51Q96ER9 411 aa5.68□□□□□ -1.5
PTPRK-213ENST00000490332 C16orf45Q96MC5 204 aaPredicted RBP5.68□□□□□ -1.5
PTPRK-213ENST00000490332 TUBB2BQ9BVA1 445 aa5.68□□□□□ -1.5
PTPRK-213ENST00000490332 KRTAP9-9Q9BYP9 154 aa5.68□□□□□ -1.5
PTPRK-213ENST00000490332 KRTAP9-4Q9BYQ2 154 aa5.68□□□□□ -1.5
PTPRK-213ENST00000490332 CSRNP2Q9H175 543 aa5.68□□□□□ -1.5
PTPRK-213ENST00000490332 TMX1Q9H3N1 280 aa5.68□□□□□ -1.5
PTPRK-213ENST00000490332 SLC28A3Q9HAS3 691 aa5.68□□□□□ -1.5
PTPRK-213ENST00000490332 MAGEF1Q9HAY2 307 aa5.68□□□□□ -1.5
PTPRK-213ENST00000490332 MKNK2Q9HBH9 465 aa5.68□□□□□ -1.5
PTPRK-213ENST00000490332 PDLIM7Q9NR12 457 aa5.68□□□□□ -1.5
PTPRK-213ENST00000490332 FANCLQ9NW38 375 aa5.68□□□□□ -1.5
PTPRK-213ENST00000490332 MCM9Q9NXL9 1143 aa5.68□□□□□ -1.5
PTPRK-213ENST00000490332 MAN1B1Q9UKM7 699 aa5.68□□□□□ -1.5
PTPRK-213ENST00000490332 MKL2Q9ULH7 1088 aa5.68□□□□□ -1.5
PTPRK-213ENST00000490332 SLC45A1Q9Y2W3 748 aa5.68□□□□□ -1.5
PTPRK-213ENST00000490332 PCDHB6Q9Y5E3 794 aa5.68□□□□□ -1.5
PTPRK-213ENST00000490332 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.68□□□□□ -1.5
PTPRK-213ENST00000490332 PLXNA3P51805 1871 aa5.68□□□□□ -1.5
PTPRK-213ENST00000490332 ZNF292O60281 2723 aa5.68□□□□□ -1.5
PTPRK-213ENST00000490332 SPTBN2O15020 2390 aa5.67□□□□□ -1.5
PTPRK-213ENST00000490332 CCDC194A0A1B0GVG4 234 aa5.67□□□□□ -1.5
PTPRK-213ENST00000490332 CLRN2A0PK11 232 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms