RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 IGFBP4P22692 258 aa11.07□□□□□ -0.64
TMEM39A-210ENST00000490099 MARK3P27448 753 aa11.07□□□□□ -0.64
TMEM39A-210ENST00000490099 STAT5BP51692 787 aa11.07□□□□□ -0.64
TMEM39A-210ENST00000490099 USP11P51784 963 aa11.07□□□□□ -0.64
TMEM39A-210ENST00000490099 GRB10Q13322 594 aa11.07□□□□□ -0.64
TMEM39A-210ENST00000490099 LPIN1Q14693 890 aa11.07□□□□□ -0.64
TMEM39A-210ENST00000490099 PLCB4Q15147 1175 aa11.07□□□□□ -0.64
TMEM39A-210ENST00000490099 NPY5RQ15761 445 aa11.07□□□□□ -0.64
TMEM39A-210ENST00000490099 TJAP1Q5JTD0 557 aa11.07□□□□□ -0.64
TMEM39A-210ENST00000490099 PLA2G4DQ86XP0 818 aa11.07□□□□□ -0.64
TMEM39A-210ENST00000490099 REXO1Q8N1G1 1221 aaKnown RBP11.07□□□□□ -0.64
TMEM39A-210ENST00000490099 ARNTL2Q8WYA1 636 aa11.07□□□□□ -0.64
TMEM39A-210ENST00000490099 SYMPKQ92797 1274 aaKnown RBP11.07□□□□□ -0.64
TMEM39A-210ENST00000490099 TNPO1Q92973 898 aaKnown RBP11.07□□□□□ -0.64
TMEM39A-210ENST00000490099 ASB2Q96Q27 587 aa11.07□□□□□ -0.64
TMEM39A-210ENST00000490099 ZBED2Q9BTP6 218 aa11.07□□□□□ -0.64
TMEM39A-210ENST00000490099 NCOA5Q9HCD5 579 aaKnown RBP11.07□□□□□ -0.64
TMEM39A-210ENST00000490099 PCDHA2Q9Y5H9 948 aa11.07□□□□□ -0.64
TMEM39A-210ENST00000490099 CYP46A1Q9Y6A2 500 aa11.07□□□□□ -0.64
TMEM39A-210ENST00000490099 MICAL3Q7RTP6 2002 aa11.06□□□□□ -0.64
TMEM39A-210ENST00000490099 COL4A6Q14031 1691 aa11.06□□□□□ -0.64
TMEM39A-210ENST00000490099 ZBTB42B2RXF5 422 aa11.06□□□□□ -0.64
TMEM39A-210ENST00000490099 ENPP3O14638 875 aa11.06□□□□□ -0.64
TMEM39A-210ENST00000490099 CCT2P78371 535 aaKnown RBP11.06□□□□□ -0.64
TMEM39A-210ENST00000490099 FBXO47Q5MNV8 452 aa11.06□□□□□ -0.64
TMEM39A-210ENST00000490099 NME8Q8N427 588 aa11.06□□□□□ -0.64
TMEM39A-210ENST00000490099 BICD2Q8TD16 824 aa11.06□□□□□ -0.64
TMEM39A-210ENST00000490099 ATP8B4Q8TF62 1192 aa11.06□□□□□ -0.64
TMEM39A-210ENST00000490099 DNAJB3Q8WWF6 145 aa11.06□□□□□ -0.64
TMEM39A-210ENST00000490099 TGS1Q96RS0 853 aaKnown RBP11.06□□□□□ -0.64
TMEM39A-210ENST00000490099 IFIH1Q9BYX4 1025 aaKnown RBP11.06□□□□□ -0.64
TMEM39A-210ENST00000490099 AZI2Q9H6S1 392 aa11.06□□□□□ -0.64
TMEM39A-210ENST00000490099 AGO3Q9H9G7 860 aaKnown RBP11.06□□□□□ -0.64
TMEM39A-210ENST00000490099 CERS4Q9HA82 394 aa11.06□□□□□ -0.64
TMEM39A-210ENST00000490099 BMP2KQ9NSY1 1161 aaPredicted RBP11.06□□□□□ -0.64
TMEM39A-210ENST00000490099 TBC1D22BQ9NU19 505 aa11.06□□□□□ -0.64
TMEM39A-210ENST00000490099 PPP4R2Q9NY27 417 aa11.06□□□□□ -0.64
TMEM39A-210ENST00000490099 THEGQ9P2T0 379 aa11.06□□□□□ -0.64
TMEM39A-210ENST00000490099 NAP1L2Q9ULW6 460 aaPredicted RBP11.06□□□□□ -0.64
TMEM39A-210ENST00000490099 MAFBQ9Y5Q3 323 aaPredicted RBP11.06□□□□□ -0.64
TMEM39A-210ENST00000490099 KDM3AQ9Y4C1 1321 aa11.06□□□□□ -0.64
TMEM39A-210ENST00000490099 BRWD1Q9NSI6 2320 aa11.06□□□□□ -0.64
TMEM39A-210ENST00000490099 CYP3A7-CYP3A51PA0A087WV96 503 aa11.05□□□□□ -0.64
TMEM39A-210ENST00000490099 SMIM35A0A1B0GVV1 85 aa11.05□□□□□ -0.64
TMEM39A-210ENST00000490099 POTEB3A0JP26 581 aa11.05□□□□□ -0.64
TMEM39A-210ENST00000490099 HBP1O60381 514 aa11.05□□□□□ -0.64
TMEM39A-210ENST00000490099 LINC00271P0C7V0 271 aa11.05□□□□□ -0.64
TMEM39A-210ENST00000490099 BMP1P13497 986 aa11.05□□□□□ -0.64
TMEM39A-210ENST00000490099 CYP3A7P24462 503 aa11.05□□□□□ -0.64
TMEM39A-210ENST00000490099 ZNF76P36508 570 aa11.05□□□□□ -0.64
TMEM39A-210ENST00000490099 TTC3P53804 2025 aa11.05□□□□□ -0.64
TMEM39A-210ENST00000490099 MRPS5P82675 430 aaKnown RBP11.05□□□□□ -0.64
TMEM39A-210ENST00000490099 MRPS6P82932 125 aaKnown RBP11.05□□□□□ -0.64
TMEM39A-210ENST00000490099 SETQ01105 290 aaPredicted RBP11.05□□□□□ -0.64
TMEM39A-210ENST00000490099 CCDC85BQ15834 202 aaPredicted RBP11.05□□□□□ -0.64
TMEM39A-210ENST00000490099 ZNF746Q6NUN9 644 aaPredicted RBP11.05□□□□□ -0.64
TMEM39A-210ENST00000490099 POTEBQ6S5H4 581 aa11.05□□□□□ -0.64
TMEM39A-210ENST00000490099 RSPH3Q86UC2 560 aa11.05□□□□□ -0.64
TMEM39A-210ENST00000490099 RTN4RL1Q86UN2 441 aaPredicted RBP11.05□□□□□ -0.64
TMEM39A-210ENST00000490099 CCDC60Q8IWA6 550 aaPredicted RBP11.05□□□□□ -0.64
TMEM39A-210ENST00000490099 CCDC148Q8NFR7 591 aa11.05□□□□□ -0.64
TMEM39A-210ENST00000490099 ZBTB10Q96DT7 871 aa11.05□□□□□ -0.64
TMEM39A-210ENST00000490099 MBOAT7Q96N66 472 aa11.05□□□□□ -0.64
TMEM39A-210ENST00000490099 SLC26A6Q9BXS9 759 aa11.05□□□□□ -0.64
TMEM39A-210ENST00000490099 UPF3BQ9BZI7 483 aaKnown RBP11.05□□□□□ -0.64
TMEM39A-210ENST00000490099 RC3H2Q9HBD1 1191 aaKnown RBP11.05□□□□□ -0.64
TMEM39A-210ENST00000490099 COL1A2P08123 1366 aa11.04□□□□□ -0.64
TMEM39A-210ENST00000490099 GTPBP6O43824 516 aaPredicted RBP11.04□□□□□ -0.64
TMEM39A-210ENST00000490099 GHRP10912 638 aa11.04□□□□□ -0.64
TMEM39A-210ENST00000490099 KLRC1P26715 233 aa11.04□□□□□ -0.64
TMEM39A-210ENST00000490099 ANAPC15P60006 121 aa11.04□□□□□ -0.64
TMEM39A-210ENST00000490099 AKAP17AQ02040 695 aaKnown RBP11.04□□□□□ -0.64
TMEM39A-210ENST00000490099 IER5Q5VY09 327 aa11.04□□□□□ -0.64
TMEM39A-210ENST00000490099 KRT40Q6A162 431 aa11.04□□□□□ -0.64
TMEM39A-210ENST00000490099 GALNT17Q6IS24 598 aa11.04□□□□□ -0.64
TMEM39A-210ENST00000490099 SWSAP1Q6NVH7 229 aa11.04□□□□□ -0.64
TMEM39A-210ENST00000490099 MIS18BP1Q6P0N0 1132 aa11.04□□□□□ -0.64
TMEM39A-210ENST00000490099 MTHFD1LQ6UB35 978 aa11.04□□□□□ -0.64
TMEM39A-210ENST00000490099 B3GNT9Q6UX72 402 aa11.04□□□□□ -0.64
TMEM39A-210ENST00000490099 TSHZ1Q6ZSZ6 1077 aa11.04□□□□□ -0.64
TMEM39A-210ENST00000490099 SMAP1Q8IYB5 467 aaPredicted RBP11.04□□□□□ -0.64
TMEM39A-210ENST00000490099 KIAA0319LQ8IZA0 1049 aa11.04□□□□□ -0.64
TMEM39A-210ENST00000490099 MYOCDQ8IZQ8 938 aa11.04□□□□□ -0.64
TMEM39A-210ENST00000490099 DAGLBQ8NCG7 672 aa11.04□□□□□ -0.64
TMEM39A-210ENST00000490099 RASGRP4Q8TDF6 673 aa11.04□□□□□ -0.64
TMEM39A-210ENST00000490099 PPM1EQ8WY54 764 aa11.04□□□□□ -0.64
TMEM39A-210ENST00000490099 SAMD11Q96NU1 681 aa11.04□□□□□ -0.64
TMEM39A-210ENST00000490099 RIT2Q99578 217 aa11.04□□□□□ -0.64
TMEM39A-210ENST00000490099 ZNF577Q9BSK1 485 aa11.04□□□□□ -0.64
TMEM39A-210ENST00000490099 CELF4Q9BZC1 486 aaKnown RBP11.04□□□□□ -0.64
TMEM39A-210ENST00000490099 VPS54Q9P1Q0 977 aa11.04□□□□□ -0.64
TMEM39A-210ENST00000490099 CDY2AQ9Y6F7 541 aa11.04□□□□□ -0.64
TMEM39A-210ENST00000490099 IGSF9BQ9UPX0 1349 aa11.04□□□□□ -0.64
TMEM39A-210ENST00000490099 VCANP13611 3396 aa11.03□□□□□ -0.64
TMEM39A-210ENST00000490099 TTLL13PA6NNM8 815 aa11.03□□□□□ -0.64
TMEM39A-210ENST00000490099 PPFIA3O75145 1194 aa11.03□□□□□ -0.64
TMEM39A-210ENST00000490099 DEXIO95424 95 aa11.03□□□□□ -0.64
TMEM39A-210ENST00000490099 KRT76Q01546 638 aa11.03□□□□□ -0.64
TMEM39A-210ENST00000490099 SSRP1Q08945 709 aaKnown RBP11.03□□□□□ -0.64
TMEM39A-210ENST00000490099 COL19A1Q14993 1142 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms