RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 NUDT11Q96G61 164 aa7.58□□□□□ -1.2
CCDC39-206ENST00000489868 CABP5Q9NP86 173 aa7.58□□□□□ -1.2
CCDC39-206ENST00000489868 UCKL1Q9NWZ5 548 aa7.58□□□□□ -1.2
CCDC39-206ENST00000489868 ARHGAP28Q9P2N2 729 aa7.58□□□□□ -1.2
CCDC39-206ENST00000489868 A0A0G2JLL6 359 aaPredicted RBP7.57□□□□□ -1.2
CCDC39-206ENST00000489868 KLHL18O94889 574 aa7.57□□□□□ -1.2
CCDC39-206ENST00000489868 F2P00734 622 aa7.57□□□□□ -1.2
CCDC39-206ENST00000489868 HOXA5P20719 270 aa7.57□□□□□ -1.2
CCDC39-206ENST00000489868 DSG1Q02413 1049 aa7.57□□□□□ -1.2
CCDC39-206ENST00000489868 RGL3Q3MIN7 710 aa7.57□□□□□ -1.2
CCDC39-206ENST00000489868 LCE4AQ5TA78 99 aa7.57□□□□□ -1.2
CCDC39-206ENST00000489868 TRMT10BQ6PF06 316 aaKnown RBP7.57□□□□□ -1.2
CCDC39-206ENST00000489868 FOXRED1Q96CU9 486 aaPredicted RBP7.57□□□□□ -1.2
CCDC39-206ENST00000489868 C20orf173Q96LM9 149 aa7.57□□□□□ -1.2
CCDC39-206ENST00000489868 GBP4Q96PP9 640 aa7.57□□□□□ -1.2
CCDC39-206ENST00000489868 WRNIP1Q96S55 665 aa7.57□□□□□ -1.2
CCDC39-206ENST00000489868 INCENPQ9NQS7 918 aa7.57□□□□□ -1.2
CCDC39-206ENST00000489868 PDE8AO60658 829 aa7.56□□□□□ -1.2
CCDC39-206ENST00000489868 HIP1RO75146 1068 aa7.56□□□□□ -1.2
CCDC39-206ENST00000489868 MYCLP1P12525 358 aaPredicted RBP7.56□□□□□ -1.2
CCDC39-206ENST00000489868 PTX3P26022 381 aaPredicted RBP7.56□□□□□ -1.2
CCDC39-206ENST00000489868 KIF11P52732 1056 aa7.56□□□□□ -1.2
CCDC39-206ENST00000489868 IL13RA1P78552 427 aa7.56□□□□□ -1.2
CCDC39-206ENST00000489868 SMAD2Q15796 467 aaKnown RBP7.56□□□□□ -1.2
CCDC39-206ENST00000489868 FAM26FQ5R3K3 315 aa7.56□□□□□ -1.2
CCDC39-206ENST00000489868 CC2D1AQ6P1N0 951 aaPredicted RBP7.56□□□□□ -1.2
CCDC39-206ENST00000489868 RTN4RL1Q86UN2 441 aaPredicted RBP7.56□□□□□ -1.2
CCDC39-206ENST00000489868 THNSL2Q86YJ6 484 aa7.56□□□□□ -1.2
CCDC39-206ENST00000489868 KIAA1958Q8N8K9 716 aa7.56□□□□□ -1.2
CCDC39-206ENST00000489868 MBD6Q96DN6 1003 aa7.56□□□□□ -1.2
CCDC39-206ENST00000489868 ADAM7Q9H2U9 754 aa7.56□□□□□ -1.2
CCDC39-206ENST00000489868 L2HGDHQ9H9P8 463 aa7.56□□□□□ -1.2
CCDC39-206ENST00000489868 OXSMQ9NWU1 459 aa7.56□□□□□ -1.2
CCDC39-206ENST00000489868 DUSP10Q9Y6W6 482 aa7.56□□□□□ -1.2
CCDC39-206ENST00000489868 PRAMEF22A3QJZ6 481 aa7.55□□□□□ -1.2
CCDC39-206ENST00000489868 SASH1O94885 1247 aa7.55□□□□□ -1.2
CCDC39-206ENST00000489868 FBXO21O94952 628 aa7.55□□□□□ -1.2
CCDC39-206ENST00000489868 SLC9A1P19634 815 aa7.55□□□□□ -1.2
CCDC39-206ENST00000489868 PPM1KQ8N3J5 372 aa7.55□□□□□ -1.2
CCDC39-206ENST00000489868 GALNT8Q9NY28 637 aa7.55□□□□□ -1.2
CCDC39-206ENST00000489868 GOLGA6L22H0YM25 854 aa7.54□□□□□ -1.2
CCDC39-206ENST00000489868 EGFLAMQ63HQ2 1017 aa7.54□□□□□ -1.2
CCDC39-206ENST00000489868 ESRP1Q6NXG1 681 aaKnown RBP7.54□□□□□ -1.2
CCDC39-206ENST00000489868 RNF180Q86T96 592 aa7.54□□□□□ -1.2
CCDC39-206ENST00000489868 KIF18BQ86Y91 864 aa7.54□□□□□ -1.2
CCDC39-206ENST00000489868 HIPK4Q8NE63 616 aa7.54□□□□□ -1.2
CCDC39-206ENST00000489868 CHTF18Q8WVB6 975 aa7.54□□□□□ -1.2
CCDC39-206ENST00000489868 ERCC4Q92889 916 aaPredicted RBP7.54□□□□□ -1.2
CCDC39-206ENST00000489868 ELF4Q99607 663 aaPredicted RBP7.54□□□□□ -1.2
CCDC39-206ENST00000489868 ASB1Q9Y576 335 aa7.54□□□□□ -1.2
CCDC39-206ENST00000489868 H7C1D1 291 aa7.53□□□□□ -1.2
CCDC39-206ENST00000489868 CYP7B1O75881 506 aa7.53□□□□□ -1.2
CCDC39-206ENST00000489868 GJA9P57773 515 aa7.53□□□□□ -1.2
CCDC39-206ENST00000489868 STILQ15468 1287 aa7.53□□□□□ -1.2
CCDC39-206ENST00000489868 SMC1BQ8NDV3 1235 aa7.53□□□□□ -1.2
CCDC39-206ENST00000489868 TMEM168Q9H0V1 697 aa7.53□□□□□ -1.2
CCDC39-206ENST00000489868 THG1LQ9NWX6 298 aaKnown RBP7.53□□□□□ -1.2
CCDC39-206ENST00000489868 MROH6A6NGR9 719 aa7.52□□□□□ -1.21
CCDC39-206ENST00000489868 TGM5O43548 720 aa7.52□□□□□ -1.21
CCDC39-206ENST00000489868 PRICKLE3O43900 615 aaPredicted RBP7.52□□□□□ -1.21
CCDC39-206ENST00000489868 CYP1A1P04798 512 aaPredicted RBP7.52□□□□□ -1.21
CCDC39-206ENST00000489868 CHGBP05060 677 aa7.52□□□□□ -1.21
CCDC39-206ENST00000489868 ECE1P42892 770 aa7.52□□□□□ -1.21
CCDC39-206ENST00000489868 MASP1P48740 699 aa7.52□□□□□ -1.21
CCDC39-206ENST00000489868 FNTBP49356 437 aa7.52□□□□□ -1.21
CCDC39-206ENST00000489868 KANK2Q63ZY3 851 aa7.52□□□□□ -1.21
CCDC39-206ENST00000489868 UBR7Q8N806 425 aa7.52□□□□□ -1.21
CCDC39-206ENST00000489868 C16orf92Q96LL3 132 aa7.52□□□□□ -1.21
CCDC39-206ENST00000489868 PCIF1Q9H4Z3 704 aa7.52□□□□□ -1.21
CCDC39-206ENST00000489868 FTSJ1Q9UET6 329 aa7.52□□□□□ -1.21
CCDC39-206ENST00000489868 C9orf118A6NHY6 69 aa7.51□□□□□ -1.21
CCDC39-206ENST00000489868 BTBD11A6QL63 1104 aa7.51□□□□□ -1.21
CCDC39-206ENST00000489868 H0Y858 1186 aa7.51□□□□□ -1.21
CCDC39-206ENST00000489868 B4GALT3O60512 393 aa7.51□□□□□ -1.21
CCDC39-206ENST00000489868 FRMD5Q7Z6J6 570 aa7.51□□□□□ -1.21
CCDC39-206ENST00000489868 LEO1Q8WVC0 666 aaPredicted RBP7.51□□□□□ -1.21
CCDC39-206ENST00000489868 LCORQ96JN0 433 aaPredicted RBP7.51□□□□□ -1.21
CCDC39-206ENST00000489868 BTBD2Q9BX70 525 aa7.51□□□□□ -1.21
CCDC39-206ENST00000489868 OR10A5Q9H207 317 aa7.51□□□□□ -1.21
CCDC39-206ENST00000489868 ACSS2Q9NR19 701 aa7.51□□□□□ -1.21
CCDC39-206ENST00000489868 USP40Q9NVE5 1235 aa7.51□□□□□ -1.21
CCDC39-206ENST00000489868 MAPRE3Q9UPY8 281 aa7.51□□□□□ -1.21
CCDC39-206ENST00000489868 ZKSCAN5Q9Y2L8 839 aa7.51□□□□□ -1.21
CCDC39-206ENST00000489868 SPO11Q9Y5K1 396 aa7.51□□□□□ -1.21
CCDC39-206ENST00000489868 GAS7O60861 476 aa7.5□□□□□ -1.21
CCDC39-206ENST00000489868 PRLP01236 227 aa7.5□□□□□ -1.21
CCDC39-206ENST00000489868 ADCY8P40145 1251 aa7.5□□□□□ -1.21
CCDC39-206ENST00000489868 ADCYAP1R1P41586 468 aa7.5□□□□□ -1.21
CCDC39-206ENST00000489868 CD83Q01151 205 aa7.5□□□□□ -1.21
CCDC39-206ENST00000489868 NFATC3Q12968 1075 aa7.5□□□□□ -1.21
CCDC39-206ENST00000489868 ZNF174Q15697 407 aa7.5□□□□□ -1.21
CCDC39-206ENST00000489868 Q6ZUG5 572 aa7.5□□□□□ -1.21
CCDC39-206ENST00000489868 STRA8Q7Z7C7 330 aa7.5□□□□□ -1.21
CCDC39-206ENST00000489868 FERMT3Q86UX7 667 aa7.5□□□□□ -1.21
CCDC39-206ENST00000489868 AHI1Q8N157 1196 aa7.5□□□□□ -1.21
CCDC39-206ENST00000489868 ZMAT4Q9H898 229 aa7.5□□□□□ -1.21
CCDC39-206ENST00000489868 SPTLC3Q9NUV7 552 aa7.5□□□□□ -1.21
CCDC39-206ENST00000489868 PTPN22Q9Y2R2 807 aa7.5□□□□□ -1.21
CCDC39-206ENST00000489868 STAT3P40763 770 aa7.49□□□□□ -1.21
CCDC39-206ENST00000489868 RGS3P49796 1198 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms