RNA–Protein interactions for RNA: ENST00000489772.5

GGA1-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 2

Gene GGA1, Length 1,384 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-222	ENST00000489772	SFN	P31947	248 aa		12.52	□□□□□ -0.41
GGA1-222	ENST00000489772	MCM2	P49736	904 aa		12.52	□□□□□ -0.41
GGA1-222	ENST00000489772	NR5A1	Q13285	461 aa		12.52	□□□□□ -0.41
GGA1-222	ENST00000489772	GPNMB	Q14956	572 aa		12.52	□□□□□ -0.41
GGA1-222	ENST00000489772	CNKSR3	Q6P9H4	555 aa		12.52	□□□□□ -0.41
GGA1-222	ENST00000489772	RUFY4	Q6ZNE9	571 aa		12.52	□□□□□ -0.41
GGA1-222	ENST00000489772		Q7L0L9	218 aa		12.52	□□□□□ -0.41
GGA1-222	ENST00000489772	RPAIN	Q86UA6	219 aa		12.52	□□□□□ -0.41
GGA1-222	ENST00000489772	DIS3L2	Q8IYB7	885 aa	Known RBP	12.52	□□□□□ -0.41
GGA1-222	ENST00000489772	FAM184A	Q8NB25	1140 aa		12.52	□□□□□ -0.41
GGA1-222	ENST00000489772	ETNPPL	Q8TBG4	499 aa		12.52	□□□□□ -0.41
GGA1-222	ENST00000489772	C8orf76	Q96K31	380 aa		12.52	□□□□□ -0.41
GGA1-222	ENST00000489772	GABBR1	Q9UBS5	961 aa		12.52	□□□□□ -0.41
GGA1-222	ENST00000489772	MSRA	Q9UJ68	235 aa		12.52	□□□□□ -0.41
GGA1-222	ENST00000489772	MAFB	Q9Y5Q3	323 aa	Predicted RBP	12.52	□□□□□ -0.41
GGA1-222	ENST00000489772	GTF3C3	Q9Y5Q9	886 aa		12.52	□□□□□ -0.41
GGA1-222	ENST00000489772	MYH7B	A7E2Y1	1941 aa		12.51	□□□□□ -0.41
GGA1-222	ENST00000489772	TMEM265	A0A087WTH1	108 aa		12.51	□□□□□ -0.41
GGA1-222	ENST00000489772	GRXCR1	A8MXD5	290 aa		12.51	□□□□□ -0.41
GGA1-222	ENST00000489772	SLC37A4	O43826	429 aa		12.51	□□□□□ -0.41
GGA1-222	ENST00000489772	MARCH6	O60337	910 aa		12.51	□□□□□ -0.41
GGA1-222	ENST00000489772	EFCAB14	O75071	495 aa		12.51	□□□□□ -0.41
GGA1-222	ENST00000489772	PSMD10	O75832	226 aa		12.51	□□□□□ -0.41
GGA1-222	ENST00000489772	DNAJB2	P25686	324 aa		12.51	□□□□□ -0.41
GGA1-222	ENST00000489772	KCNJ6	P48051	423 aa		12.51	□□□□□ -0.41
GGA1-222	ENST00000489772	MBTPS1	Q14703	1052 aa		12.51	□□□□□ -0.41
GGA1-222	ENST00000489772	RAB30	Q15771	203 aa		12.51	□□□□□ -0.41
GGA1-222	ENST00000489772	EARS2	Q5JPH6	523 aa	Known RBP	12.51	□□□□□ -0.41
GGA1-222	ENST00000489772	ZNF484	Q5JVG2	852 aa		12.51	□□□□□ -0.41
GGA1-222	ENST00000489772	RDM1	Q8NG50	284 aa		12.51	□□□□□ -0.41
GGA1-222	ENST00000489772	PHOSPHO2	Q8TCD6	241 aa		12.51	□□□□□ -0.41
GGA1-222	ENST00000489772	BBX	Q8WY36	941 aa	Predicted RBP	12.51	□□□□□ -0.41
GGA1-222	ENST00000489772	TNFRSF25	Q93038	417 aa		12.51	□□□□□ -0.41
GGA1-222	ENST00000489772	GJA10	Q969M2	543 aa		12.51	□□□□□ -0.41
GGA1-222	ENST00000489772	TIFA	Q96CG3	184 aa		12.51	□□□□□ -0.41
GGA1-222	ENST00000489772	FAM20A	Q96MK3	541 aa		12.51	□□□□□ -0.41
GGA1-222	ENST00000489772	SLC9A7	Q96T83	725 aa		12.51	□□□□□ -0.41
GGA1-222	ENST00000489772	PBX4	Q9BYU1	374 aa		12.51	□□□□□ -0.41
GGA1-222	ENST00000489772	UNC45A	Q9H3U1	944 aa		12.51	□□□□□ -0.41
GGA1-222	ENST00000489772	PCDHA2	Q9Y5H9	948 aa		12.51	□□□□□ -0.41
GGA1-222	ENST00000489772	ABHD14A-ACY1	A0A1B0GW23	586 aa		12.5	□□□□□ -0.41
GGA1-222	ENST00000489772	TBX3	O15119	743 aa		12.5	□□□□□ -0.41
GGA1-222	ENST00000489772	ATP4A	P20648	1035 aa		12.5	□□□□□ -0.41
GGA1-222	ENST00000489772	IKBKE	Q14164	716 aa		12.5	□□□□□ -0.41
GGA1-222	ENST00000489772	FAM26D	Q5JW98	314 aa		12.5	□□□□□ -0.41
GGA1-222	ENST00000489772	IER5	Q5VY09	327 aa		12.5	□□□□□ -0.41
GGA1-222	ENST00000489772	MTHFD1L	Q6UB35	978 aa		12.5	□□□□□ -0.41
GGA1-222	ENST00000489772	MIER3	Q7Z3K6	550 aa		12.5	□□□□□ -0.41
GGA1-222	ENST00000489772	TRAPPC12	Q8WVT3	735 aa		12.5	□□□□□ -0.41
GGA1-222	ENST00000489772	DNAJB3	Q8WWF6	145 aa		12.5	□□□□□ -0.41
GGA1-222	ENST00000489772	SEPT8	Q92599	483 aa		12.5	□□□□□ -0.41
GGA1-222	ENST00000489772	FAM167A	Q96KS9	214 aa		12.5	□□□□□ -0.41
GGA1-222	ENST00000489772	FAM49A	Q9H0Q0	323 aa	Predicted RBP	12.5	□□□□□ -0.41
GGA1-222	ENST00000489772	SEMA6B	Q9H3T3	888 aa		12.5	□□□□□ -0.41
GGA1-222	ENST00000489772	CEP131	Q9UPN4	1083 aa		12.5	□□□□□ -0.41
GGA1-222	ENST00000489772	COL1A2	P08123	1366 aa		12.49	□□□□□ -0.41
GGA1-222	ENST00000489772	IGSF9B	Q9UPX0	1349 aa		12.49	□□□□□ -0.41
GGA1-222	ENST00000489772	SMIM35	A0A1B0GVV1	85 aa		12.49	□□□□□ -0.41
GGA1-222	ENST00000489772	FAM205C	A6NFA0	338 aa		12.49	□□□□□ -0.41
GGA1-222	ENST00000489772	BAG4	O95429	457 aa	Known RBP	12.49	□□□□□ -0.41
GGA1-222	ENST00000489772	KLRC1	P26715	233 aa		12.49	□□□□□ -0.41
GGA1-222	ENST00000489772	PBX2	P40425	430 aa		12.49	□□□□□ -0.41
GGA1-222	ENST00000489772	GUCY1B3	Q02153	619 aa		12.49	□□□□□ -0.41
GGA1-222	ENST00000489772	GNL2	Q13823	731 aa	Known RBP	12.49	□□□□□ -0.41
GGA1-222	ENST00000489772	TRMT1L	Q7Z2T5	733 aa	Known RBP	12.49	□□□□□ -0.41
GGA1-222	ENST00000489772	SLFN12	Q8IYM2	578 aa		12.49	□□□□□ -0.41
GGA1-222	ENST00000489772	NME8	Q8N427	588 aa		12.49	□□□□□ -0.41
GGA1-222	ENST00000489772	FBXO18	Q8NFZ0	1043 aa		12.49	□□□□□ -0.41
GGA1-222	ENST00000489772	ZBTB10	Q96DT7	871 aa		12.49	□□□□□ -0.41
GGA1-222	ENST00000489772	TMX3	Q96JJ7	454 aa		12.49	□□□□□ -0.41
GGA1-222	ENST00000489772	FAM161B	Q96MY7	647 aa		12.49	□□□□□ -0.41
GGA1-222	ENST00000489772	BACH2	Q9BYV9	841 aa		12.49	□□□□□ -0.41
GGA1-222	ENST00000489772	KCNMB3	Q9NPA1	279 aa		12.49	□□□□□ -0.41
GGA1-222	ENST00000489772	NRBP2	Q9NSY0	501 aa		12.49	□□□□□ -0.41
GGA1-222	ENST00000489772	MTMR10	Q9NXD2	777 aa		12.49	□□□□□ -0.41
GGA1-222	ENST00000489772	KIF3A	Q9Y496	699 aa		12.49	□□□□□ -0.41
GGA1-222	ENST00000489772	KIF28P	B7ZC32	967 aa		12.48	□□□□□ -0.41
GGA1-222	ENST00000489772		M0QZ92	97 aa		12.48	□□□□□ -0.41
GGA1-222	ENST00000489772	CHRNA1	P02708	482 aa		12.48	□□□□□ -0.41
GGA1-222	ENST00000489772	OAT	P04181	439 aa		12.48	□□□□□ -0.41
GGA1-222	ENST00000489772	RABGGTB	P53611	331 aa		12.48	□□□□□ -0.41
GGA1-222	ENST00000489772	WDR5	P61964	334 aa	Known RBP	12.48	□□□□□ -0.41
GGA1-222	ENST00000489772	MRPS6	P82932	125 aa	Known RBP	12.48	□□□□□ -0.41
GGA1-222	ENST00000489772	PPP2R5C	Q13362	524 aa		12.48	□□□□□ -0.41
GGA1-222	ENST00000489772	PLEKHG4	Q58EX7	1191 aa		12.48	□□□□□ -0.41
GGA1-222	ENST00000489772	B3GNT9	Q6UX72	402 aa		12.48	□□□□□ -0.41
GGA1-222	ENST00000489772	HERC6	Q8IVU3	1022 aa		12.48	□□□□□ -0.41
GGA1-222	ENST00000489772	DBF4B	Q8NFT6	615 aa		12.48	□□□□□ -0.41
GGA1-222	ENST00000489772	HAS1	Q92839	578 aa		12.48	□□□□□ -0.41
GGA1-222	ENST00000489772	APBB2	Q92870	758 aa		12.48	□□□□□ -0.41
GGA1-222	ENST00000489772	TTYH1	Q9H313	450 aa	Predicted RBP	12.48	□□□□□ -0.41
GGA1-222	ENST00000489772	FOXP1	Q9H334	677 aa	Predicted RBP	12.48	□□□□□ -0.41
GGA1-222	ENST00000489772	PCDHA11	Q9Y5I1	949 aa		12.48	□□□□□ -0.41
GGA1-222	ENST00000489772	ZBTB42	B2RXF5	422 aa		12.47	□□□□□ -0.41
GGA1-222	ENST00000489772	MAGEB2	O15479	319 aa		12.47	□□□□□ -0.41
GGA1-222	ENST00000489772	CD2BP2	O95400	341 aa	Known RBP	12.47	□□□□□ -0.41
GGA1-222	ENST00000489772	PRKCE	Q02156	737 aa		12.47	□□□□□ -0.41
GGA1-222	ENST00000489772	MGAT3	Q09327	533 aa		12.47	□□□□□ -0.41
GGA1-222	ENST00000489772	CALCRL	Q16602	461 aa		12.47	□□□□□ -0.41
GGA1-222	ENST00000489772	METTL13	Q8N6R0	699 aa		12.47	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms