RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 PLPPR4Q7Z2D5 763 aa11.94□□□□□ -0.5
SCAMP4-208ENST00000489554 NOSTRINQ8IVI9 506 aa11.94□□□□□ -0.5
SCAMP4-208ENST00000489554 HERC6Q8IVU3 1022 aa11.94□□□□□ -0.5
SCAMP4-208ENST00000489554 MAFAQ8NHW3 353 aaPredicted RBP11.94□□□□□ -0.5
SCAMP4-208ENST00000489554 GAS2L1Q99501 681 aaPredicted RBP11.94□□□□□ -0.5
SCAMP4-208ENST00000489554 SCN5AQ14524 2016 aa11.94□□□□□ -0.5
SCAMP4-208ENST00000489554 TCHHQ07283 1943 aa11.94□□□□□ -0.5
SCAMP4-208ENST00000489554 RRN3P2A6NIE6 340 aa11.93□□□□□ -0.5
SCAMP4-208ENST00000489554 IPO5O00410 1097 aaKnown RBP11.93□□□□□ -0.5
SCAMP4-208ENST00000489554 ATG7O95352 703 aa11.93□□□□□ -0.5
SCAMP4-208ENST00000489554 CIITAP33076 1130 aa11.93□□□□□ -0.5
SCAMP4-208ENST00000489554 STAT5BP51692 787 aa11.93□□□□□ -0.5
SCAMP4-208ENST00000489554 GRIK4Q16099 956 aa11.93□□□□□ -0.5
SCAMP4-208ENST00000489554 FAM26DQ5JW98 314 aa11.93□□□□□ -0.5
SCAMP4-208ENST00000489554 CLEC17AQ6ZS10 378 aa11.93□□□□□ -0.5
SCAMP4-208ENST00000489554 RPAINQ86UA6 219 aa11.93□□□□□ -0.5
SCAMP4-208ENST00000489554 RSPH3Q86UC2 560 aa11.93□□□□□ -0.5
SCAMP4-208ENST00000489554 PCYT2Q99447 389 aa11.93□□□□□ -0.5
SCAMP4-208ENST00000489554 TBC1D22BQ9NU19 505 aa11.93□□□□□ -0.5
SCAMP4-208ENST00000489554 TCEAL9Q9UHQ7 104 aa11.93□□□□□ -0.5
SCAMP4-208ENST00000489554 TUBE1Q9UJT0 475 aa11.93□□□□□ -0.5
SCAMP4-208ENST00000489554 DOCK5Q9H7D0 1870 aa11.93□□□□□ -0.5
SCAMP4-208ENST00000489554 MBLAC1A4D2B0 266 aaPredicted RBP11.92□□□□□ -0.5
SCAMP4-208ENST00000489554 CTSHP09668 335 aa11.92□□□□□ -0.5
SCAMP4-208ENST00000489554 MYOGP15173 224 aa11.92□□□□□ -0.5
SCAMP4-208ENST00000489554 USP11P51784 963 aa11.92□□□□□ -0.5
SCAMP4-208ENST00000489554 PLEKHG4Q58EX7 1191 aa11.92□□□□□ -0.5
SCAMP4-208ENST00000489554 FAM160B1Q5W0V3 765 aa11.92□□□□□ -0.5
SCAMP4-208ENST00000489554 MCTP1Q6DN14 999 aa11.92□□□□□ -0.5
SCAMP4-208ENST00000489554 BRAPQ7Z569 592 aa11.92□□□□□ -0.5
SCAMP4-208ENST00000489554 DBF4BQ8NFT6 615 aa11.92□□□□□ -0.5
SCAMP4-208ENST00000489554 SEPT8Q92599 483 aa11.92□□□□□ -0.5
SCAMP4-208ENST00000489554 ZNF577Q9BSK1 485 aa11.92□□□□□ -0.5
SCAMP4-208ENST00000489554 PRDM12Q9H4Q4 367 aa11.92□□□□□ -0.5
SCAMP4-208ENST00000489554 ZSCAN16Q9H4T2 348 aaPredicted RBP11.92□□□□□ -0.5
SCAMP4-208ENST00000489554 TRPC6Q9Y210 931 aa11.92□□□□□ -0.5
SCAMP4-208ENST00000489554 TRIP12Q14669 1992 aaPredicted RBP11.91□□□□□ -0.5
SCAMP4-208ENST00000489554 IGKV6D-21A0A0A0MT36 114 aa11.91□□□□□ -0.5
SCAMP4-208ENST00000489554 DDX39AO00148 427 aaKnown RBP11.91□□□□□ -0.5
SCAMP4-208ENST00000489554 BACH1O14867 736 aa11.91□□□□□ -0.5
SCAMP4-208ENST00000489554 DHX15O43143 795 aaKnown RBP11.91□□□□□ -0.5
SCAMP4-208ENST00000489554 TLL1O43897 1013 aa11.91□□□□□ -0.5
SCAMP4-208ENST00000489554 CCNE2O96020 404 aa11.91□□□□□ -0.5
SCAMP4-208ENST00000489554 CA3P07451 260 aa11.91□□□□□ -0.5
SCAMP4-208ENST00000489554 INSRRP14616 1297 aa11.91□□□□□ -0.5
SCAMP4-208ENST00000489554 KRT76Q01546 638 aa11.91□□□□□ -0.5
SCAMP4-208ENST00000489554 NBR1Q14596 966 aa11.91□□□□□ -0.5
SCAMP4-208ENST00000489554 PLCB4Q15147 1175 aa11.91□□□□□ -0.5
SCAMP4-208ENST00000489554 SAFBQ15424 915 aaKnown RBP eCLIP11.91□□□□□ -0.5
SCAMP4-208ENST00000489554 PRR16Q569H4 304 aa11.91□□□□□ -0.5
SCAMP4-208ENST00000489554 MARCH8Q5T0T0 291 aa11.91□□□□□ -0.5
SCAMP4-208ENST00000489554 ZNF746Q6NUN9 644 aaPredicted RBP11.91□□□□□ -0.5
SCAMP4-208ENST00000489554 MIS18BP1Q6P0N0 1132 aa11.91□□□□□ -0.5
SCAMP4-208ENST00000489554 ABHD15Q6UXT9 468 aa11.91□□□□□ -0.5
SCAMP4-208ENST00000489554 PIK3AP1Q6ZUJ8 805 aa11.91□□□□□ -0.5
SCAMP4-208ENST00000489554 SMAP1Q8IYB5 467 aaPredicted RBP11.91□□□□□ -0.5
SCAMP4-208ENST00000489554 APBB2Q92870 758 aa11.91□□□□□ -0.5
SCAMP4-208ENST00000489554 ZBED2Q9BTP6 218 aa11.91□□□□□ -0.5
SCAMP4-208ENST00000489554 TET1Q8NFU7 2136 aa11.9□□□□□ -0.5
SCAMP4-208ENST00000489554 POTEB3A0JP26 581 aa11.9□□□□□ -0.5
SCAMP4-208ENST00000489554 HBP1O60381 514 aa11.9□□□□□ -0.5
SCAMP4-208ENST00000489554 GJB5O95377 273 aa11.9□□□□□ -0.5
SCAMP4-208ENST00000489554 AMHP03971 560 aa11.9□□□□□ -0.5
SCAMP4-208ENST00000489554 IGBP1P78318 339 aa11.9□□□□□ -0.5
SCAMP4-208ENST00000489554 DEFB103AP81534 67 aa11.9□□□□□ -0.5
SCAMP4-208ENST00000489554 DNM1Q05193 864 aaKnown RBP11.9□□□□□ -0.5
SCAMP4-208ENST00000489554 TCTN1Q2MV58 587 aa11.9□□□□□ -0.5
SCAMP4-208ENST00000489554 POTEBQ6S5H4 581 aa11.9□□□□□ -0.5
SCAMP4-208ENST00000489554 RUFY4Q6ZNE9 571 aa11.9□□□□□ -0.5
SCAMP4-208ENST00000489554 KRT25Q7Z3Z0 450 aa11.9□□□□□ -0.5
SCAMP4-208ENST00000489554 TBCKQ8TEA7 893 aa11.9□□□□□ -0.5
SCAMP4-208ENST00000489554 LENG9Q96B70 501 aa11.9□□□□□ -0.5
SCAMP4-208ENST00000489554 USP28Q96RU2 1077 aa11.9□□□□□ -0.5
SCAMP4-208ENST00000489554 RAD9AQ99638 391 aa11.9□□□□□ -0.5
SCAMP4-208ENST00000489554 BRMS1Q9HCU9 246 aa11.9□□□□□ -0.5
SCAMP4-208ENST00000489554 ZNF302Q9NR11 478 aa11.9□□□□□ -0.5
SCAMP4-208ENST00000489554 COL6A3P12111 3177 aa11.89□□□□□ -0.51
SCAMP4-208ENST00000489554 CHRNA1P02708 482 aa11.89□□□□□ -0.51
SCAMP4-208ENST00000489554 PSAPP07602 524 aa11.89□□□□□ -0.51
SCAMP4-208ENST00000489554 MKRN4PQ13434 485 aaPredicted RBP11.89□□□□□ -0.51
SCAMP4-208ENST00000489554 NONOQ15233 471 aaKnown RBP eCLIP11.89□□□□□ -0.512e-6■■■□□ 18.6
SCAMP4-208ENST00000489554 NFKBIBQ15653 356 aa11.89□□□□□ -0.51
SCAMP4-208ENST00000489554 INF2Q27J81 1249 aa11.89□□□□□ -0.51
SCAMP4-208ENST00000489554 FOXD4L6Q3SYB3 417 aaPredicted RBP11.89□□□□□ -0.51
SCAMP4-208ENST00000489554 IER5Q5VY09 327 aa11.89□□□□□ -0.51
SCAMP4-208ENST00000489554 PDXDC2PQ6P474 469 aa11.89□□□□□ -0.51
SCAMP4-208ENST00000489554 FOXD4L3Q6VB84 417 aaPredicted RBP11.89□□□□□ -0.51
SCAMP4-208ENST00000489554 CCDC60Q8IWA6 550 aaPredicted RBP11.89□□□□□ -0.51
SCAMP4-208ENST00000489554 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.89□□□□□ -0.51
SCAMP4-208ENST00000489554 ATP8B4Q8TF62 1192 aa11.89□□□□□ -0.51
SCAMP4-208ENST00000489554 DNAJB3Q8WWF6 145 aa11.89□□□□□ -0.51
SCAMP4-208ENST00000489554 RIT2Q99578 217 aa11.89□□□□□ -0.51
SCAMP4-208ENST00000489554 IFIH1Q9BYX4 1025 aaKnown RBP11.89□□□□□ -0.51
SCAMP4-208ENST00000489554 PCDHB6Q9Y5E3 794 aa11.89□□□□□ -0.51
SCAMP4-208ENST00000489554 PCDHA2Q9Y5H9 948 aa11.89□□□□□ -0.51
SCAMP4-208ENST00000489554 PCDHA10Q9Y5I2 948 aa11.89□□□□□ -0.51
SCAMP4-208ENST00000489554 COL1A2P08123 1366 aa11.89□□□□□ -0.51
SCAMP4-208ENST00000489554 CDH23Q9H251 3354 aa11.88□□□□□ -0.51
SCAMP4-208ENST00000489554 CYP3A7-CYP3A51PA0A087WV96 503 aa11.88□□□□□ -0.51
SCAMP4-208ENST00000489554 SMIM35A0A1B0GVV1 85 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms