RNA–Protein interactions for RNA: ENST00000489342.1

RAB4A-204, Transcript of RAB4A, member RAS oncogene family, humanhuman

TSL 5

Gene RAB4A, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4A-204ENST00000489342 KRTAP19-4Q3LI73 84 aa6.85□□□□□ -1.31
RAB4A-204ENST00000489342 TCERG1LQ5VWI1 586 aa6.85□□□□□ -1.31
RAB4A-204ENST00000489342 CNKSR3Q6P9H4 555 aa6.85□□□□□ -1.31
RAB4A-204ENST00000489342 CCDC103Q8IW40 242 aa6.85□□□□□ -1.31
RAB4A-204ENST00000489342 TMEM151BQ8IW70 566 aa6.85□□□□□ -1.31
RAB4A-204ENST00000489342 KREMEN2Q8NCW0 462 aa6.85□□□□□ -1.31
RAB4A-204ENST00000489342 RCBTB1Q8NDN9 531 aa6.85□□□□□ -1.31
RAB4A-204ENST00000489342 DPF3Q92784 378 aa6.85□□□□□ -1.31
RAB4A-204ENST00000489342 TMEM169Q96HH4 297 aa6.85□□□□□ -1.31
RAB4A-204ENST00000489342 IPO9Q96P70 1041 aaKnown RBP6.85□□□□□ -1.31
RAB4A-204ENST00000489342 PFDN2Q9UHV9 154 aa6.85□□□□□ -1.31
RAB4A-204ENST00000489342 PCDHA5Q9Y5H7 936 aa6.85□□□□□ -1.31
RAB4A-204ENST00000489342 CPDO75976 1380 aa6.84□□□□□ -1.31
RAB4A-204ENST00000489342 LMO7Q8WWI1 1683 aa6.84□□□□□ -1.31
RAB4A-204ENST00000489342 WDR17Q8IZU2 1322 aa6.84□□□□□ -1.31
RAB4A-204ENST00000489342 NCAM1P13591 858 aa6.84□□□□□ -1.31
RAB4A-204ENST00000489342 LSAMPQ13449 338 aa6.84□□□□□ -1.31
RAB4A-204ENST00000489342 NSMFQ6X4W1 530 aa6.84□□□□□ -1.31
RAB4A-204ENST00000489342 CILP2Q8IUL8 1156 aa6.84□□□□□ -1.31
RAB4A-204ENST00000489342 IGDCC3Q8IVU1 814 aa6.84□□□□□ -1.31
RAB4A-204ENST00000489342 NLGN1Q8N2Q7 840 aa6.84□□□□□ -1.31
RAB4A-204ENST00000489342 PLEKHO2Q8TD55 490 aa6.84□□□□□ -1.31
RAB4A-204ENST00000489342 TSPAN17Q96FV3 270 aa6.84□□□□□ -1.31
RAB4A-204ENST00000489342 LTV1Q96GA3 475 aaPredicted RBP6.84□□□□□ -1.31
RAB4A-204ENST00000489342 SPATA9Q9BWV2 254 aa6.84□□□□□ -1.31
RAB4A-204ENST00000489342 BCAS3Q9H6U6 928 aa6.84□□□□□ -1.31
RAB4A-204ENST00000489342 SIT1Q9Y3P8 196 aa6.84□□□□□ -1.31
RAB4A-204ENST00000489342 PPIP5K1Q6PFW1 1433 aa6.84□□□□□ -1.32
RAB4A-204ENST00000489342 ADGRB1O14514 1584 aa6.83□□□□□ -1.32
RAB4A-204ENST00000489342 PNPLA7Q6ZV29 1317 aa6.83□□□□□ -1.32
RAB4A-204ENST00000489342 IRS4O14654 1257 aaPredicted RBP6.83□□□□□ -1.32
RAB4A-204ENST00000489342 DLX3O60479 287 aa6.83□□□□□ -1.32
RAB4A-204ENST00000489342 LCP1P13796 627 aa6.83□□□□□ -1.32
RAB4A-204ENST00000489342 SSRP1Q08945 709 aaKnown RBP6.83□□□□□ -1.32
RAB4A-204ENST00000489342 RASGRF1Q13972 1273 aa6.83□□□□□ -1.32
RAB4A-204ENST00000489342 SLC35F1Q5T1Q4 408 aa6.83□□□□□ -1.32
RAB4A-204ENST00000489342 SOGA3Q5TF21 947 aa6.83□□□□□ -1.32
RAB4A-204ENST00000489342 MROH9Q5TGP6 573 aa6.83□□□□□ -1.32
RAB4A-204ENST00000489342 SPATC1Q76KD6 591 aa6.83□□□□□ -1.32
RAB4A-204ENST00000489342 C1QL4Q86Z23 238 aa6.83□□□□□ -1.32
RAB4A-204ENST00000489342 PANK1Q8TE04 598 aa6.83□□□□□ -1.32
RAB4A-204ENST00000489342 SEC14L1Q92503 715 aa6.83□□□□□ -1.32
RAB4A-204ENST00000489342 CDC6Q99741 560 aa6.83□□□□□ -1.32
RAB4A-204ENST00000489342 RNF38Q9H0F5 515 aa6.83□□□□□ -1.32
RAB4A-204ENST00000489342 CCDC113Q9H0I3 377 aa6.83□□□□□ -1.32
RAB4A-204ENST00000489342 CLDND1Q9NY35 253 aa6.83□□□□□ -1.32
RAB4A-204ENST00000489342 MSRB2Q9Y3D2 182 aa6.83□□□□□ -1.32
RAB4A-204ENST00000489342 POLR3AO14802 1390 aaPredicted RBP6.82□□□□□ -1.32
RAB4A-204ENST00000489342 KAT6BQ8WYB5 2073 aa6.82□□□□□ -1.32
RAB4A-204ENST00000489342 FGFR1P11362 822 aa6.82□□□□□ -1.32
RAB4A-204ENST00000489342 LIMS1P48059 325 aa6.82□□□□□ -1.32
RAB4A-204ENST00000489342 AFF3P51826 1226 aaKnown RBP6.82□□□□□ -1.32
RAB4A-204ENST00000489342 DENND5AQ6IQ26 1287 aa6.82□□□□□ -1.32
RAB4A-204ENST00000489342 NPM2Q86SE8 214 aaKnown RBP6.82□□□□□ -1.32
RAB4A-204ENST00000489342 FAM129CQ86XR2 697 aa6.82□□□□□ -1.32
RAB4A-204ENST00000489342 SIAH1Q8IUQ4 282 aa6.82□□□□□ -1.32
RAB4A-204ENST00000489342 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.82□□□□□ -1.32
RAB4A-204ENST00000489342 ZNF669Q96BR6 464 aaPredicted RBP6.82□□□□□ -1.32
RAB4A-204ENST00000489342 C1orf159Q96HA4 380 aa6.82□□□□□ -1.32
RAB4A-204ENST00000489342 PWWP2AQ96N64 755 aa6.82□□□□□ -1.32
RAB4A-204ENST00000489342 ARHGEF4Q9NR80 690 aa6.82□□□□□ -1.32
RAB4A-204ENST00000489342 USP6P35125 1406 aa6.82□□□□□ -1.32
RAB4A-204ENST00000489342 AATKQ6ZMQ8 1374 aa6.82□□□□□ -1.32
RAB4A-204ENST00000489342 IRS2Q9Y4H2 1338 aa6.81□□□□□ -1.32
RAB4A-204ENST00000489342 ARNTLO00327 626 aa6.81□□□□□ -1.32
RAB4A-204ENST00000489342 ASGR2P07307 311 aa6.81□□□□□ -1.32
RAB4A-204ENST00000489342 PABPC1P11940 636 aaKnown RBP6.81□□□□□ -1.32
RAB4A-204ENST00000489342 PMLP29590 882 aa6.81□□□□□ -1.32
RAB4A-204ENST00000489342 TESK1Q15569 626 aa6.81□□□□□ -1.32
RAB4A-204ENST00000489342 ARHGEF25Q86VW2 580 aa6.81□□□□□ -1.32
RAB4A-204ENST00000489342 NLRP10Q86W26 655 aa6.81□□□□□ -1.32
RAB4A-204ENST00000489342 COL23A1Q86Y22 540 aaPredicted RBP6.81□□□□□ -1.32
RAB4A-204ENST00000489342 TMEFF1Q8IYR6 380 aa6.81□□□□□ -1.32
RAB4A-204ENST00000489342 SREK1Q8WXA9 508 aaKnown RBP6.81□□□□□ -1.32
RAB4A-204ENST00000489342 DDX11Q96FC9 970 aa6.81□□□□□ -1.32
RAB4A-204ENST00000489342 SRPK1Q96SB4 655 aaKnown RBP6.81□□□□□ -1.32
RAB4A-204ENST00000489342 PHF20Q9BVI0 1012 aa6.81□□□□□ -1.32
RAB4A-204ENST00000489342 PLA2G2DQ9UNK4 145 aa6.81□□□□□ -1.32
RAB4A-204ENST00000489342 AKAP12Q02952 1782 aa6.81□□□□□ -1.32
RAB4A-204ENST00000489342 RGPD5Q99666 1765 aa6.81□□□□□ -1.32
RAB4A-204ENST00000489342 H7BY64 318 aa6.8□□□□□ -1.32
RAB4A-204ENST00000489342 MC3RP41968 323 aa6.8□□□□□ -1.32
RAB4A-204ENST00000489342 FOXO4P98177 505 aa6.8□□□□□ -1.32
RAB4A-204ENST00000489342 RBL2Q08999 1139 aa6.8□□□□□ -1.32
RAB4A-204ENST00000489342 ITSN1Q15811 1721 aa6.8□□□□□ -1.32
RAB4A-204ENST00000489342 LCNL1Q6ZST4 164 aa6.8□□□□□ -1.32
RAB4A-204ENST00000489342 DPH6Q7L8W6 267 aa6.8□□□□□ -1.32
RAB4A-204ENST00000489342 MILR1Q7Z6M3 343 aa6.8□□□□□ -1.32
RAB4A-204ENST00000489342 AMIGO3Q86WK7 504 aa6.8□□□□□ -1.32
RAB4A-204ENST00000489342 RIOX2Q8IUF8 465 aa6.8□□□□□ -1.32
RAB4A-204ENST00000489342 DCAF4Q8WV16 495 aa6.8□□□□□ -1.32
RAB4A-204ENST00000489342 DEPDC7Q96QD5 511 aa6.8□□□□□ -1.32
RAB4A-204ENST00000489342 YIPF4Q9BSR8 244 aa6.8□□□□□ -1.32
RAB4A-204ENST00000489342 GPR27Q9NS67 375 aa6.8□□□□□ -1.32
RAB4A-204ENST00000489342 FBXL7Q9UJT9 491 aa6.8□□□□□ -1.32
RAB4A-204ENST00000489342 X6R8D5 127 aa6.8□□□□□ -1.32
RAB4A-204ENST00000489342 BRD4O60885 1362 aaPredicted RBP6.8□□□□□ -1.32
RAB4A-204ENST00000489342 SGSM2O43147 1006 aa6.79□□□□□ -1.32
RAB4A-204ENST00000489342 DGKIO75912 1065 aa6.79□□□□□ -1.32
RAB4A-204ENST00000489342 CAPNS1P04632 268 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms