RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 DUSP10Q9Y6W6 482 aa5.83□□□□□ -1.48
XRN1-213ENST00000489241 CKMP06732 381 aa5.82□□□□□ -1.48
XRN1-213ENST00000489241 COL6A2P12110 1019 aa5.82□□□□□ -1.48
XRN1-213ENST00000489241 RPL13P26373 211 aaKnown RBP5.82□□□□□ -1.48
XRN1-213ENST00000489241 LACTBP83111 547 aaPredicted RBP5.82□□□□□ -1.48
XRN1-213ENST00000489241 TTF1Q15361 905 aaPredicted RBP5.82□□□□□ -1.48
XRN1-213ENST00000489241 ZNF827Q17R98 1081 aa5.82□□□□□ -1.48
XRN1-213ENST00000489241 RNF219Q5W0B1 726 aaPredicted RBP5.82□□□□□ -1.48
XRN1-213ENST00000489241 FAM126BQ8IXS8 530 aa5.82□□□□□ -1.48
XRN1-213ENST00000489241 TTLL6Q8N841 843 aa5.82□□□□□ -1.48
XRN1-213ENST00000489241 IGSF22Q8N9C0 903 aa5.82□□□□□ -1.48
XRN1-213ENST00000489241 ORAI3Q9BRQ5 295 aa5.82□□□□□ -1.48
XRN1-213ENST00000489241 CABP5Q9NP86 173 aa5.82□□□□□ -1.48
XRN1-213ENST00000489241 SLC52A1Q9NWF4 448 aa5.82□□□□□ -1.48
XRN1-213ENST00000489241 SLC5A4Q9NY91 659 aa5.82□□□□□ -1.48
XRN1-213ENST00000489241 DSEQ9UL01 958 aa5.82□□□□□ -1.48
XRN1-213ENST00000489241 PALD1Q9ULE6 856 aa5.82□□□□□ -1.48
XRN1-213ENST00000489241 COQ6Q9Y2Z9 468 aa5.82□□□□□ -1.48
XRN1-213ENST00000489241 PCDHB4Q9Y5E5 795 aa5.82□□□□□ -1.48
XRN1-213ENST00000489241 NKRFO15226 690 aaKnown RBP eCLIP5.81□□□□□ -1.48
XRN1-213ENST00000489241 BRINP1O60477 761 aa5.81□□□□□ -1.48
XRN1-213ENST00000489241 PDE6AP16499 860 aa5.81□□□□□ -1.48
XRN1-213ENST00000489241 BPIP17213 487 aa5.81□□□□□ -1.48
XRN1-213ENST00000489241 ITGA1P56199 1179 aa5.81□□□□□ -1.48
XRN1-213ENST00000489241 MTMR1Q13613 665 aa5.81□□□□□ -1.48
XRN1-213ENST00000489241 ARHGAP44Q17R89 818 aa5.81□□□□□ -1.48
XRN1-213ENST00000489241 HABP4Q5JVS0 413 aaKnown RBP5.81□□□□□ -1.48
XRN1-213ENST00000489241 FAM26FQ5R3K3 315 aa5.81□□□□□ -1.48
XRN1-213ENST00000489241 PIK3R6Q5UE93 754 aa5.81□□□□□ -1.48
XRN1-213ENST00000489241 HHIPL2Q6UWX4 724 aa5.81□□□□□ -1.48
XRN1-213ENST00000489241 CD300LDQ6UXZ3 194 aa5.81□□□□□ -1.48
XRN1-213ENST00000489241 ARHGAP36Q6ZRI8 547 aa5.81□□□□□ -1.48
XRN1-213ENST00000489241 FAM26EQ8N5C1 309 aa5.81□□□□□ -1.48
XRN1-213ENST00000489241 C2orf69Q8N8R5 385 aa5.81□□□□□ -1.48
XRN1-213ENST00000489241 UHMK1Q8TAS1 419 aaKnown RBP5.81□□□□□ -1.48
XRN1-213ENST00000489241 NGRNQ9NPE2 291 aaKnown RBP5.81□□□□□ -1.48
XRN1-213ENST00000489241 MYOTQ9UBF9 498 aa5.81□□□□□ -1.48
XRN1-213ENST00000489241 TCEAL9Q9UHQ7 104 aa5.81□□□□□ -1.48
XRN1-213ENST00000489241 M0R2C6 588 aa5.8□□□□□ -1.48
XRN1-213ENST00000489241 NEMP1O14524 444 aa5.8□□□□□ -1.48
XRN1-213ENST00000489241 SLC27A2O14975 620 aa5.8□□□□□ -1.48
XRN1-213ENST00000489241 KRT15P19012 456 aa5.8□□□□□ -1.48
XRN1-213ENST00000489241 ID4P47928 161 aa5.8□□□□□ -1.48
XRN1-213ENST00000489241 EPHB1P54762 984 aa5.8□□□□□ -1.48
XRN1-213ENST00000489241 MCL1Q07820 350 aa5.8□□□□□ -1.48
XRN1-213ENST00000489241 NFE2Q16621 373 aaPredicted RBP5.8□□□□□ -1.48
XRN1-213ENST00000489241 RGL3Q3MIN7 710 aa5.8□□□□□ -1.48
XRN1-213ENST00000489241 TMEM177Q53S58 311 aa5.8□□□□□ -1.48
XRN1-213ENST00000489241 OVCH1Q7RTY7 1134 aa5.8□□□□□ -1.48
XRN1-213ENST00000489241 GGNQ86UU5 652 aa5.8□□□□□ -1.48
XRN1-213ENST00000489241 OSTM1Q86WC4 334 aa5.8□□□□□ -1.48
XRN1-213ENST00000489241 KIF18BQ86Y91 864 aa5.8□□□□□ -1.48
XRN1-213ENST00000489241 OR2W6PQ8NHA6 318 aa5.8□□□□□ -1.48
XRN1-213ENST00000489241 USP7Q93009 1102 aa5.8□□□□□ -1.48
XRN1-213ENST00000489241 TSR2Q969E8 191 aaKnown RBP5.8□□□□□ -1.48
XRN1-213ENST00000489241 TTC1Q99614 292 aa5.8□□□□□ -1.48
XRN1-213ENST00000489241 TRIM8Q9BZR9 551 aa5.8□□□□□ -1.48
XRN1-213ENST00000489241 CCDC8Q9H0W5 538 aaPredicted RBP5.8□□□□□ -1.48
XRN1-213ENST00000489241 ASH2LQ9UBL3 628 aa5.8□□□□□ -1.48
XRN1-213ENST00000489241 CBLCQ9ULV8 474 aa5.8□□□□□ -1.48
XRN1-213ENST00000489241 SLC12A8A0AV02 714 aa5.79□□□□□ -1.48
XRN1-213ENST00000489241 ZNF891A8MT65 544 aaPredicted RBP5.79□□□□□ -1.48
XRN1-213ENST00000489241 CBX4O00257 560 aa5.79□□□□□ -1.48
XRN1-213ENST00000489241 ZEB2O60315 1214 aa5.79□□□□□ -1.48
XRN1-213ENST00000489241 GLRX3O76003 335 aaKnown RBP5.79□□□□□ -1.48
XRN1-213ENST00000489241 ITGB3P05106 788 aa5.79□□□□□ -1.48
XRN1-213ENST00000489241 SCNN1BP51168 640 aa5.79□□□□□ -1.48
XRN1-213ENST00000489241 ITKQ08881 620 aa5.79□□□□□ -1.48
XRN1-213ENST00000489241 SART3Q15020 963 aaKnown RBP5.79□□□□□ -1.48
XRN1-213ENST00000489241 SPATS2Q86XZ4 545 aaKnown RBP5.79□□□□□ -1.48
XRN1-213ENST00000489241 CISD2Q8N5K1 135 aaKnown RBP5.79□□□□□ -1.48
XRN1-213ENST00000489241 SYT3Q9BQG1 590 aa5.79□□□□□ -1.48
XRN1-213ENST00000489241 YIPF4Q9BSR8 244 aa5.79□□□□□ -1.48
XRN1-213ENST00000489241 PUS7LQ9H0K6 701 aaKnown RBP5.79□□□□□ -1.48
XRN1-213ENST00000489241 IFT22Q9H7X7 185 aa5.79□□□□□ -1.48
XRN1-213ENST00000489241 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.79□□□□□ -1.48
XRN1-213ENST00000489241 ZKSCAN5Q9Y2L8 839 aa5.79□□□□□ -1.48
XRN1-213ENST00000489241 TCRBV5S2A0A599 114 aa5.78□□□□□ -1.48
XRN1-213ENST00000489241 F2P00734 622 aa5.78□□□□□ -1.48
XRN1-213ENST00000489241 AMY2AP04746 511 aa5.78□□□□□ -1.48
XRN1-213ENST00000489241 AMY2BP19961 511 aa5.78□□□□□ -1.48
XRN1-213ENST00000489241 STAT5AP42229 794 aa5.78□□□□□ -1.48
XRN1-213ENST00000489241 MAGEA10P43363 369 aaPredicted RBP5.78□□□□□ -1.48
XRN1-213ENST00000489241 JAM2P57087 298 aa5.78□□□□□ -1.48
XRN1-213ENST00000489241 TMPRSS15P98073 1019 aa5.78□□□□□ -1.48
XRN1-213ENST00000489241 KIAA2012Q0VF49 1180 aa5.78□□□□□ -1.48
XRN1-213ENST00000489241 ZXDCQ2QGD7 858 aaPredicted RBP5.78□□□□□ -1.48
XRN1-213ENST00000489241 PRR31Q5SQ13 230 aa5.78□□□□□ -1.48
XRN1-213ENST00000489241 BORAQ6PGQ7 559 aa5.78□□□□□ -1.48
XRN1-213ENST00000489241 KCTD1Q719H9 257 aa5.78□□□□□ -1.48
XRN1-213ENST00000489241 FAM124AQ86V42 546 aa5.78□□□□□ -1.48
XRN1-213ENST00000489241 NXPE1Q8N323 547 aa5.78□□□□□ -1.48
XRN1-213ENST00000489241 CHST14Q8NCH0 376 aa5.78□□□□□ -1.48
XRN1-213ENST00000489241 COG1Q8WTW3 980 aa5.78□□□□□ -1.48
XRN1-213ENST00000489241 MTMR8Q96EF0 704 aa5.78□□□□□ -1.48
XRN1-213ENST00000489241 GABBR1Q9UBS5 961 aa5.78□□□□□ -1.48
XRN1-213ENST00000489241 ATP23Q9Y6H3 246 aa5.78□□□□□ -1.48
XRN1-213ENST00000489241 TCRBV5S4A2TA0A5A2 114 aa5.77□□□□□ -1.49
XRN1-213ENST00000489241 SHTN1A0MZ66 631 aa5.77□□□□□ -1.49
XRN1-213ENST00000489241 MROH6A6NGR9 719 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms