RNA–Protein interactions for RNA: ENST00000488864.5

CHD1L-208, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-208ENST00000488864 SHCBP1Q8NEM2 672 aa14.72□□□□□ -0.05
CHD1L-208ENST00000488864 ETNPPLQ8TBG4 499 aa14.72□□□□□ -0.05
CHD1L-208ENST00000488864 NAP1L4Q99733 375 aaKnown RBP14.72□□□□□ -0.05
CHD1L-208ENST00000488864 MXRA8Q9BRK3 442 aa14.72□□□□□ -0.05
CHD1L-208ENST00000488864 IVNS1ABPQ9Y6Y0 642 aa14.72□□□□□ -0.05
CHD1L-208ENST00000488864 FRMPD4Q14CM0 1322 aa14.72□□□□□ -0.05
CHD1L-208ENST00000488864 MEIS1O00470 390 aa14.72□□□□□ -0.05
CHD1L-208ENST00000488864 ADORA2AP29274 412 aa14.72□□□□□ -0.05
CHD1L-208ENST00000488864 CASP14P31944 242 aa14.72□□□□□ -0.05
CHD1L-208ENST00000488864 COPB2P35606 906 aa14.72□□□□□ -0.05
CHD1L-208ENST00000488864 PRPHP41219 470 aa14.72□□□□□ -0.05
CHD1L-208ENST00000488864 ALDH5A1P51649 535 aaPredicted RBP14.72□□□□□ -0.05
CHD1L-208ENST00000488864 ORC2Q13416 577 aaPredicted RBP14.72□□□□□ -0.05
CHD1L-208ENST00000488864 C17orf99Q6UX52 265 aa14.72□□□□□ -0.05
CHD1L-208ENST00000488864 LEKR1Q6ZMV7 388 aa14.72□□□□□ -0.05
CHD1L-208ENST00000488864 EEPD1Q7L9B9 569 aa14.72□□□□□ -0.05
CHD1L-208ENST00000488864 VSIG10LQ86VR7 867 aa14.72□□□□□ -0.05
CHD1L-208ENST00000488864 PCDHA12Q9UN75 941 aa14.72□□□□□ -0.05
CHD1L-208ENST00000488864 LCTP09848 1927 aa14.71□□□□□ -0.05
CHD1L-208ENST00000488864 CTAGE9A4FU28 777 aa14.71□□□□□ -0.05
CHD1L-208ENST00000488864 COBLO75128 1261 aa14.71□□□□□ -0.05
CHD1L-208ENST00000488864 PHACTR2O75167 634 aa14.71□□□□□ -0.05
CHD1L-208ENST00000488864 ERCC5P28715 1186 aaPredicted RBP14.71□□□□□ -0.05
CHD1L-208ENST00000488864 FXR1P51114 621 aaKnown RBP eCLIP14.71□□□□□ -0.05
CHD1L-208ENST00000488864 CASP8Q14790 479 aa14.71□□□□□ -0.05
CHD1L-208ENST00000488864 TRIML1Q8N9V2 468 aa14.71□□□□□ -0.05
CHD1L-208ENST00000488864 ZNF579Q8NAF0 562 aaKnown RBP14.71□□□□□ -0.05
CHD1L-208ENST00000488864 SPATA20Q8TB22 786 aa14.71□□□□□ -0.05
CHD1L-208ENST00000488864 PLIN2Q99541 437 aa14.71□□□□□ -0.05
CHD1L-208ENST00000488864 KCNH7Q9NS40 1196 aa14.71□□□□□ -0.05
CHD1L-208ENST00000488864 ADD3Q9UEY8 706 aaKnown RBP14.71□□□□□ -0.05
CHD1L-208ENST00000488864 DOCK3Q8IZD9 2030 aa14.71□□□□□ -0.05
CHD1L-208ENST00000488864 HTTP42858 3142 aa14.71□□□□□ -0.06
CHD1L-208ENST00000488864 A0A087X0B3 334 aa14.71□□□□□ -0.06
CHD1L-208ENST00000488864 DDX39AO00148 427 aaKnown RBP14.71□□□□□ -0.06
CHD1L-208ENST00000488864 CA12O43570 354 aa14.71□□□□□ -0.06
CHD1L-208ENST00000488864 MFAP3LO75121 409 aa14.71□□□□□ -0.06
CHD1L-208ENST00000488864 ERLIN1O75477 346 aa14.71□□□□□ -0.06
CHD1L-208ENST00000488864 CCND2P30279 289 aa14.71□□□□□ -0.06
CHD1L-208ENST00000488864 NOP2P46087 812 aaKnown RBP14.71□□□□□ -0.06
CHD1L-208ENST00000488864 MTMR1Q13613 665 aa14.71□□□□□ -0.06
CHD1L-208ENST00000488864 SMYD4Q8IYR2 804 aaPredicted RBP14.71□□□□□ -0.06
CHD1L-208ENST00000488864 NOA1Q8NC60 698 aaKnown RBP14.71□□□□□ -0.06
CHD1L-208ENST00000488864 FGD4Q96M96 766 aa14.71□□□□□ -0.06
CHD1L-208ENST00000488864 NAA15Q9BXJ9 866 aaKnown RBP14.71□□□□□ -0.06
CHD1L-208ENST00000488864 DNAJC25-GNG10A0A024R161 153 aa14.7□□□□□ -0.06
CHD1L-208ENST00000488864 LRRIQ3A6PVS8 624 aaPredicted RBP14.7□□□□□ -0.06
CHD1L-208ENST00000488864 RGS20O76081 388 aa14.7□□□□□ -0.06
CHD1L-208ENST00000488864 LONP1P36776 959 aaKnown RBP14.7□□□□□ -0.06
CHD1L-208ENST00000488864 AFMP43652 599 aa14.7□□□□□ -0.06
CHD1L-208ENST00000488864 SPATA1Q5VX52 437 aa14.7□□□□□ -0.06
CHD1L-208ENST00000488864 DNERQ8NFT8 737 aa14.7□□□□□ -0.06
CHD1L-208ENST00000488864 ZNF577Q9BSK1 485 aa14.7□□□□□ -0.06
CHD1L-208ENST00000488864 UBIAD1Q9Y5Z9 338 aa14.7□□□□□ -0.06
CHD1L-208ENST00000488864 RNF225M0QZC1 329 aaPredicted RBP14.7□□□□□ -0.06
CHD1L-208ENST00000488864 SORBS3O60504 671 aa14.7□□□□□ -0.06
CHD1L-208ENST00000488864 EIF3JO75822 258 aaKnown RBP14.7□□□□□ -0.06
CHD1L-208ENST00000488864 GYPCP04921 128 aa14.7□□□□□ -0.06
CHD1L-208ENST00000488864 TMEM266Q2M3C6 531 aa14.7□□□□□ -0.06
CHD1L-208ENST00000488864 JADE2Q9NQC1 790 aa14.7□□□□□ -0.06
CHD1L-208ENST00000488864 LRWD1Q9UFC0 647 aa14.7□□□□□ -0.06
CHD1L-208ENST00000488864 IPO5O00410 1097 aaKnown RBP14.69□□□□□ -0.06
CHD1L-208ENST00000488864 CHMP2AO43633 222 aa14.69□□□□□ -0.06
CHD1L-208ENST00000488864 TRPA1O75762 1119 aa14.69□□□□□ -0.06
CHD1L-208ENST00000488864 MAPK4P31152 587 aa14.69□□□□□ -0.06
CHD1L-208ENST00000488864 ARHGAP25P42331 645 aa14.69□□□□□ -0.06
CHD1L-208ENST00000488864 CUL4BQ13620 913 aa14.69□□□□□ -0.06
CHD1L-208ENST00000488864 CDKAL1Q5VV42 579 aa14.69□□□□□ -0.06
CHD1L-208ENST00000488864 PLEKHH3Q7Z736 793 aa14.69□□□□□ -0.06
CHD1L-208ENST00000488864 MSL3Q8N5Y2 521 aaKnown RBP14.69□□□□□ -0.06
CHD1L-208ENST00000488864 RASSF8Q8NHQ8 419 aa14.69□□□□□ -0.06
CHD1L-208ENST00000488864 ZNFX1Q9P2E3 1918 aaKnown RBP14.69□□□□□ -0.06
CHD1L-208ENST00000488864 ATP9AO75110 1047 aa14.68□□□□□ -0.06
CHD1L-208ENST00000488864 RPS6KA5O75582 802 aa14.68□□□□□ -0.06
CHD1L-208ENST00000488864 IVLP07476 585 aa14.68□□□□□ -0.06
CHD1L-208ENST00000488864 UBA7P41226 1012 aa14.68□□□□□ -0.06
CHD1L-208ENST00000488864 FXR2P51116 673 aaKnown RBP eCLIP14.68□□□□□ -0.064e-8■■■■□ 20.2
CHD1L-208ENST00000488864 SETQ01105 290 aaPredicted RBP14.68□□□□□ -0.06
CHD1L-208ENST00000488864 PDE4DQ08499 809 aa14.68□□□□□ -0.06
CHD1L-208ENST00000488864 STXBP2Q15833 593 aa14.68□□□□□ -0.06
CHD1L-208ENST00000488864 LRCH2Q5VUJ6 765 aa14.68□□□□□ -0.06
CHD1L-208ENST00000488864 LRRC31Q6UY01 552 aa14.68□□□□□ -0.06
CHD1L-208ENST00000488864 SEPT14Q6ZU15 432 aa14.68□□□□□ -0.06
CHD1L-208ENST00000488864 DPP9Q86TI2 863 aa14.68□□□□□ -0.06
CHD1L-208ENST00000488864 SLFN12Q8IYM2 578 aa14.68□□□□□ -0.06
CHD1L-208ENST00000488864 NAPGQ99747 312 aaPredicted RBP14.68□□□□□ -0.06
CHD1L-208ENST00000488864 NUDT12Q9BQG2 462 aa14.68□□□□□ -0.06
CHD1L-208ENST00000488864 BCAS3Q9H6U6 928 aa14.68□□□□□ -0.06
CHD1L-208ENST00000488864 SYNRGQ9UMZ2 1314 aa14.68□□□□□ -0.06
CHD1L-208ENST00000488864 CTAGE15A4D2H0 777 aa14.68□□□□□ -0.06
CHD1L-208ENST00000488864 ANKRD65E5RJM6 399 aa14.68□□□□□ -0.06
CHD1L-208ENST00000488864 CTAGE8P0CG41 777 aa14.68□□□□□ -0.06
CHD1L-208ENST00000488864 NCAPH2Q6IBW4 605 aa14.68□□□□□ -0.06
CHD1L-208ENST00000488864 CTAGE6Q86UF2 777 aa14.68□□□□□ -0.06
CHD1L-208ENST00000488864 CTAGE4Q8IX94 777 aa14.68□□□□□ -0.06
CHD1L-208ENST00000488864 FAM20AQ96MK3 541 aa14.68□□□□□ -0.06
CHD1L-208ENST00000488864 PLEKHA4Q9H4M7 779 aa14.68□□□□□ -0.06
CHD1L-208ENST00000488864 PPP1R3GB7ZBB8 358 aa14.67□□□□□ -0.06
CHD1L-208ENST00000488864 TBX3O15119 743 aa14.67□□□□□ -0.06
CHD1L-208ENST00000488864 STRNO43815 780 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms